data_9PT
# 
_chem_comp.id                                    9PT 
_chem_comp.name                                  
;(2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-3,5-bis(oxidanyl)-6-[4-(3-quinolin-1-ium-1-ylpropyl)-1,2,3-triazol-1-yl]oxan-4-yl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-oxane-3,4,5-triol
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H45 N4 O15" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2017-06-21 
_chem_comp.pdbx_modified_date                    2018-04-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        725.717 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9PT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5OA6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9PT C4  C1  C 0 1 N N R 10.775 -10.697 -24.420 0.372   3.799  -1.526 C4  9PT 1  
9PT C5  C2  C 0 1 N N R 10.134 -9.317  -24.546 -0.957  4.351  -1.003 C5  9PT 2  
9PT C6  C3  C 0 1 N N N 9.458  -8.961  -25.862 -1.487  5.409  -1.972 C6  9PT 3  
9PT C3  C4  C 0 1 N N S 11.251 -10.851 -22.979 0.866   2.698  -0.581 C3  9PT 4  
9PT CBR C5  C 0 1 Y N N 4.857  -8.352  -16.146 -9.742  -0.277 1.445  CBR 9PT 5  
9PT CBS C6  C 0 1 Y N N 4.903  -8.516  -14.766 -10.995 -0.135 0.852  CBS 9PT 6  
9PT CBP C7  C 0 1 Y N N 3.872  -8.016  -13.987 -11.402 -1.026 -0.100 CBP 9PT 7  
9PT CBT C8  C 0 1 Y N N 2.808  -7.350  -14.591 -10.526 -2.069 -0.452 CBT 9PT 8  
9PT CBY C9  C 0 1 Y N N 1.795  -6.864  -13.759 -10.875 -3.022 -1.423 CBY 9PT 9  
9PT CBX C10 C 0 1 Y N N 0.702  -6.193  -14.299 -10.000 -4.016 -1.736 CBX 9PT 10 
9PT CBW C11 C 0 1 Y N N 0.625  -6.011  -15.676 -8.760  -4.102 -1.105 CBW 9PT 11 
9PT CBV C12 C 0 1 Y N N 1.635  -6.498  -16.517 -8.389  -3.197 -0.159 CBV 9PT 12 
9PT CBU C13 C 0 1 Y N N 2.752  -7.180  -15.995 -9.266  -2.155 0.191  CBU 9PT 13 
9PT NBQ N1  N 1 1 Y N N 3.760  -7.672  -16.788 -8.926  -1.247 1.112  NBQ 9PT 14 
9PT CBN C14 C 0 1 N N N 3.711  -7.492  -18.271 -7.621  -1.346 1.770  CBN 9PT 15 
9PT CBO C15 C 0 1 N N N 4.876  -8.226  -18.926 -6.564  -0.648 0.912  CBO 9PT 16 
9PT CAA C16 C 0 1 N N N 4.959  -7.791  -20.374 -5.200  -0.751 1.599  CAA 9PT 17 
9PT CAB C17 C 0 1 Y N N 6.144  -8.601  -20.951 -4.159  -0.063 0.754  CAB 9PT 18 
9PT CAC C18 C 0 1 Y N N 7.351  -8.164  -21.287 -3.321  0.924  1.146  CAC 9PT 19 
9PT NAD N2  N 0 1 Y N N 6.105  -9.907  -21.191 -3.877  -0.313 -0.530 NAD 9PT 20 
9PT NAE N3  N 0 1 Y N N 7.182  -10.252 -21.646 -2.931  0.471  -0.909 NAE 9PT 21 
9PT NAF N4  N 0 1 Y N N 7.991  -9.255  -21.719 -2.567  1.231  0.065  NAF 9PT 22 
9PT C1  C19 C 0 1 N N R 9.366  -9.353  -22.268 -1.517  2.251  0.012  C1  9PT 23 
9PT C2  C20 C 0 1 N N R 10.075 -10.686 -22.012 -0.211  1.615  -0.471 C2  9PT 24 
9PT O2  O1  O 0 1 N N N 10.538 -10.694 -20.674 0.209   0.618  0.464  O2  9PT 25 
9PT O5  O2  O 0 1 N N N 9.044  -9.236  -23.640 -1.904  3.286  -0.894 O5  9PT 26 
9PT O6  O3  O 0 1 N N N 9.580  -10.048 -26.769 -2.665  6.006  -1.428 O6  9PT 27 
9PT O4  O4  O 0 1 N N N 11.903 -10.855 -25.311 1.339   4.850  -1.581 O4  9PT 28 
9PT O3  O5  O 0 1 N N N 11.791 -12.167 -22.847 2.068   2.127  -1.101 O3  9PT 29 
9PT CAR C21 C 0 1 N N S 12.996 -12.263 -22.096 2.958   1.634  -0.097 CAR 9PT 30 
9PT CAS C22 C 0 1 N N R 13.317 -13.745 -21.883 4.146   0.936  -0.766 CAS 9PT 31 
9PT OAT O6  O 0 1 N N N 12.279 -14.325 -21.097 3.680   -0.189 -1.514 OAT 9PT 32 
9PT OAU O7  O 0 1 N N N 14.045 -11.670 -22.843 3.432   2.723  0.696  OAU 9PT 33 
9PT CAV C23 C 0 1 N N R 15.303 -11.655 -22.139 4.314   2.336  1.752  CAV 9PT 34 
9PT CAW C24 C 0 1 N N N 16.212 -10.845 -23.053 4.733   3.574  2.547  CAW 9PT 35 
9PT OAX O8  O 0 1 N N N 16.674 -11.678 -24.129 3.589   4.132  3.197  OAX 9PT 36 
9PT CAY C25 C 0 1 N N R 15.754 -13.107 -21.879 5.556   1.667  1.157  CAY 9PT 37 
9PT OAZ O9  O 0 1 N N N 16.911 -13.104 -21.051 6.413   1.226  2.213  OAZ 9PT 38 
9PT CBA C26 C 0 1 N N S 14.644 -13.862 -21.149 5.124   0.464  0.313  CBA 9PT 39 
9PT OBB O10 O 0 1 N N N 15.024 -15.250 -21.059 6.271   -0.123 -0.305 OBB 9PT 40 
9PT CBC C27 C 0 1 N N S 14.814 -15.814 -19.746 6.152   -1.528 -0.536 CBC 9PT 41 
9PT OBD O11 O 0 1 N N N 15.607 -15.121 -18.764 6.070   -2.212 0.716  OBD 9PT 42 
9PT CBE C28 C 0 1 N N R 15.349 -15.604 -17.418 5.922   -3.629 0.599  CBE 9PT 43 
9PT CBF C29 C 0 1 N N N 16.086 -14.834 -16.331 5.817   -4.248 1.994  CBF 9PT 44 
9PT OBG O12 O 0 1 N N N 17.410 -14.626 -16.844 4.620   -3.793 2.628  OBG 9PT 45 
9PT CBH C30 C 0 1 N N S 15.763 -17.111 -17.339 7.137   -4.209 -0.128 CBH 9PT 46 
9PT OBI O13 O 0 1 N N N 15.395 -17.657 -16.045 6.965   -5.618 -0.298 OBI 9PT 47 
9PT CBJ C31 C 0 1 N N S 15.081 -17.933 -18.435 7.270   -3.541 -1.500 CBJ 9PT 48 
9PT OBK O14 O 0 1 N N N 15.679 -19.246 -18.500 8.443   -4.025 -2.156 OBK 9PT 49 
9PT CBL C32 C 0 1 N N R 15.259 -17.270 -19.795 7.377   -2.025 -1.308 CBL 9PT 50 
9PT OBM O15 O 0 1 N N N 14.499 -17.991 -20.755 7.428   -1.385 -2.585 OBM 9PT 51 
9PT H1  H1  H 0 1 N N N 10.016 -11.465 -24.631 0.227   3.385  -2.523 H1  9PT 52 
9PT H2  H2  H 0 1 N N N 10.887 -8.550  -24.311 -0.803  4.801  -0.022 H2  9PT 53 
9PT H3  H3  H 0 1 N N N 9.939  -8.070  -26.292 -0.727  6.176  -2.124 H3  9PT 54 
9PT H4  H4  H 0 1 N N N 8.393  -8.752  -25.682 -1.725  4.939  -2.927 H4  9PT 55 
9PT H5  H5  H 0 1 N N N 12.014 -10.090 -22.761 1.060   3.123  0.404  H5  9PT 56 
9PT H6  H6  H 0 1 N N N 5.662  -8.743  -16.751 -9.433  0.435  2.197  H6  9PT 57 
9PT H7  H7  H 0 1 N N N 5.735  -9.028  -14.306 -11.643 0.677  1.145  H7  9PT 58 
9PT H8  H8  H 0 1 N N N 3.893  -8.142  -12.915 -12.370 -0.931 -0.570 H8  9PT 59 
9PT H9  H9  H 0 1 N N N 1.861  -7.010  -12.691 -11.833 -2.966 -1.918 H9  9PT 60 
9PT H10 H10 H 0 1 N N N -0.079 -5.817  -13.655 -10.270 -4.749 -2.482 H10 9PT 61 
9PT H11 H11 H 0 1 N N N -0.220 -5.490  -16.101 -8.083  -4.901 -1.371 H11 9PT 62 
9PT H12 H12 H 0 1 N N N 1.556  -6.348  -17.584 -7.425  -3.277 0.320  H12 9PT 63 
9PT H13 H13 H 0 1 N N N 3.776  -6.420  -18.510 -7.670  -0.867 2.747  H13 9PT 64 
9PT H14 H14 H 0 1 N N N 2.763  -7.897  -18.656 -7.354  -2.395 1.892  H14 9PT 65 
9PT H15 H15 H 0 1 N N N 4.708  -9.312  -18.873 -6.515  -1.127 -0.066 H15 9PT 66 
9PT H16 H16 H 0 1 N N N 5.813  -7.974  -18.408 -6.830  0.402  0.789  H16 9PT 67 
9PT H17 H17 H 0 1 N N N 5.154  -6.711  -20.445 -5.249  -0.271 2.576  H17 9PT 68 
9PT H18 H18 H 0 1 N N N 4.027  -8.031  -20.907 -4.934  -1.801 1.721  H18 9PT 69 
9PT H19 H19 H 0 1 N N N 7.731  -7.155  -21.225 -3.265  1.377  2.125  H19 9PT 70 
9PT H20 H20 H 0 1 N N N 9.989  -8.517  -21.918 -1.370  2.674  1.006  H20 9PT 71 
9PT H21 H21 H 0 1 N N N 9.361  -11.506 -22.177 -0.368  1.156  -1.447 H21 9PT 72 
9PT H22 H22 H 0 1 N N N 9.801  -10.591 -20.083 -0.426  -0.101 0.584  H22 9PT 73 
9PT H23 H23 H 0 1 N N N 9.158  -9.825  -27.590 -3.057  6.688  -1.991 H23 9PT 74 
9PT H24 H24 H 0 1 N N N 12.273 -11.723 -25.203 1.090   5.582  -2.162 H24 9PT 75 
9PT H25 H25 H 0 1 N N N 12.886 -11.772 -21.118 2.431   0.923  0.539  H25 9PT 76 
9PT H26 H26 H 0 1 N N N 13.393 -14.245 -22.860 4.649   1.635  -1.434 H26 9PT 77 
9PT H27 H27 H 0 1 N N N 12.465 -15.246 -20.956 3.051   0.037  -2.213 H27 9PT 78 
9PT H28 H28 H 0 1 N N N 15.198 -11.134 -21.176 3.805   1.634  2.412  H28 9PT 79 
9PT H29 H29 H 0 1 N N N 17.074 -10.476 -22.479 5.474   3.292  3.295  H29 9PT 80 
9PT H30 H30 H 0 1 N N N 15.653 -9.992  -23.464 5.163   4.312  1.870  H30 9PT 81 
9PT H31 H31 H 0 1 N N N 17.241 -11.173 -24.700 3.781   4.922  3.720  H31 9PT 82 
9PT H32 H32 H 0 1 N N N 15.960 -13.600 -22.840 6.089   2.380  0.528  H32 9PT 83 
9PT H33 H33 H 0 1 N N N 17.189 -13.998 -20.891 6.722   1.937  2.791  H33 9PT 84 
9PT H34 H34 H 0 1 N N N 14.531 -13.438 -20.140 4.635   -0.273 0.951  H34 9PT 85 
9PT H35 H35 H 0 1 N N N 13.748 -15.770 -19.478 5.251   -1.726 -1.117 H35 9PT 86 
9PT H36 H36 H 0 1 N N N 14.270 -15.542 -17.213 5.018   -3.854 0.032  H36 9PT 87 
9PT H37 H37 H 0 1 N N N 15.592 -13.870 -16.139 5.793   -5.334 1.909  H37 9PT 88 
9PT H38 H38 H 0 1 N N N 16.121 -15.420 -15.401 6.680   -3.949 2.590  H38 9PT 89 
9PT H39 H39 H 0 1 N N N 17.925 -14.146 -16.206 4.488   -4.147 3.519  H39 9PT 90 
9PT H40 H40 H 0 1 N N N 16.853 -17.177 -17.475 8.037   -4.021 0.459  H40 9PT 91 
9PT H41 H41 H 0 1 N N N 15.814 -17.153 -15.357 7.699   -6.052 -0.752 H41 9PT 92 
9PT H42 H42 H 0 1 N N N 14.007 -18.013 -18.209 6.393   -3.772 -2.104 H42 9PT 93 
9PT H43 H43 H 0 1 N N N 15.581 -19.681 -17.661 8.590   -3.643 -3.032 H43 9PT 94 
9PT H44 H44 H 0 1 N N N 16.326 -17.301 -20.062 8.281   -1.791 -0.746 H44 9PT 95 
9PT H45 H45 H 0 1 N N N 14.788 -18.896 -20.774 7.491   -0.421 -2.540 H45 9PT 96 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9PT O6  C6  SING N N 1   
9PT C6  C5  SING N N 2   
9PT O4  C4  SING N N 3   
9PT C5  C4  SING N N 4   
9PT C5  O5  SING N N 5   
9PT C4  C3  SING N N 6   
9PT OAX CAW SING N N 7   
9PT O5  C1  SING N N 8   
9PT CAW CAV SING N N 9   
9PT C3  O3  SING N N 10  
9PT C3  C2  SING N N 11  
9PT O3  CAR SING N N 12  
9PT OAU CAV SING N N 13  
9PT OAU CAR SING N N 14  
9PT C1  C2  SING N N 15  
9PT C1  NAF SING N N 16  
9PT CAV CAY SING N N 17  
9PT CAR CAS SING N N 18  
9PT C2  O2  SING N N 19  
9PT CAS CBA SING N N 20  
9PT CAS OAT SING N N 21  
9PT CAY CBA SING N N 22  
9PT CAY OAZ SING N N 23  
9PT NAF NAE SING Y N 24  
9PT NAF CAC SING Y N 25  
9PT NAE NAD DOUB Y N 26  
9PT CAC CAB DOUB Y N 27  
9PT NAD CAB SING Y N 28  
9PT CBA OBB SING N N 29  
9PT OBB CBC SING N N 30  
9PT CAB CAA SING N N 31  
9PT OBM CBL SING N N 32  
9PT CAA CBO SING N N 33  
9PT CBL CBC SING N N 34  
9PT CBL CBJ SING N N 35  
9PT CBC OBD SING N N 36  
9PT CBO CBN SING N N 37  
9PT OBD CBE SING N N 38  
9PT OBK CBJ SING N N 39  
9PT CBJ CBH SING N N 40  
9PT CBN NBQ SING N N 41  
9PT CBE CBH SING N N 42  
9PT CBE CBF SING N N 43  
9PT CBH OBI SING N N 44  
9PT OBG CBF SING N N 45  
9PT NBQ CBR DOUB Y N 46  
9PT NBQ CBU SING Y N 47  
9PT CBV CBU DOUB Y N 48  
9PT CBV CBW SING Y N 49  
9PT CBR CBS SING Y N 50  
9PT CBU CBT SING Y N 51  
9PT CBW CBX DOUB Y N 52  
9PT CBS CBP DOUB Y N 53  
9PT CBT CBP SING Y N 54  
9PT CBT CBY DOUB Y N 55  
9PT CBX CBY SING Y N 56  
9PT C4  H1  SING N N 57  
9PT C5  H2  SING N N 58  
9PT C6  H3  SING N N 59  
9PT C6  H4  SING N N 60  
9PT C3  H5  SING N N 61  
9PT CBR H6  SING N N 62  
9PT CBS H7  SING N N 63  
9PT CBP H8  SING N N 64  
9PT CBY H9  SING N N 65  
9PT CBX H10 SING N N 66  
9PT CBW H11 SING N N 67  
9PT CBV H12 SING N N 68  
9PT CBN H13 SING N N 69  
9PT CBN H14 SING N N 70  
9PT CBO H15 SING N N 71  
9PT CBO H16 SING N N 72  
9PT CAA H17 SING N N 73  
9PT CAA H18 SING N N 74  
9PT CAC H19 SING N N 75  
9PT C1  H20 SING N N 76  
9PT C2  H21 SING N N 77  
9PT O2  H22 SING N N 78  
9PT O6  H23 SING N N 79  
9PT O4  H24 SING N N 80  
9PT CAR H25 SING N N 81  
9PT CAS H26 SING N N 82  
9PT OAT H27 SING N N 83  
9PT CAV H28 SING N N 84  
9PT CAW H29 SING N N 85  
9PT CAW H30 SING N N 86  
9PT OAX H31 SING N N 87  
9PT CAY H32 SING N N 88  
9PT OAZ H33 SING N N 89  
9PT CBA H34 SING N N 90  
9PT CBC H35 SING N N 91  
9PT CBE H36 SING N N 92  
9PT CBF H37 SING N N 93  
9PT CBF H38 SING N N 94  
9PT OBG H39 SING N N 95  
9PT CBH H40 SING N N 96  
9PT OBI H41 SING N N 97  
9PT CBJ H42 SING N N 98  
9PT OBK H43 SING N N 99  
9PT CBL H44 SING N N 100 
9PT OBM H45 SING N N 101 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9PT InChI            InChI                1.03  
;InChI=1S/C32H45N4O15/c37-12-18-21(40)24(43)25(44)31(48-18)51-29-23(42)20(14-39)49-32(27(29)46)50-28-22(41)19(13-38)47-30(26(28)45)36-11-16(33-34-36)7-4-10-35-9-3-6-15-5-1-2-8-17(15)35/h1-3,5-6,8-9,11,18-32,37-46H,4,7,10,12-14H2/q+1/t18-,19-,20-,21-,22-,23-,24+,25-,26-,27-,28+,29+,30-,31+,32+/m1/s1
;
9PT InChIKey         InChI                1.03  ZDLMHTZQWQBSDO-DGUZUYFASA-N 
9PT SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](CO)O[C@@H](O[C@H]3[C@H](O)[C@@H](CO)O[C@H]([C@@H]3O)n4cc(CCC[n+]5cccc6ccccc56)nn4)[C@@H]2O)[C@H](O)[C@@H](O)[C@@H]1O" 
9PT SMILES           CACTVS               3.385 "OC[CH]1O[CH](O[CH]2[CH](O)[CH](CO)O[CH](O[CH]3[CH](O)[CH](CO)O[CH]([CH]3O)n4cc(CCC[n+]5cccc6ccccc56)nn4)[CH]2O)[CH](O)[CH](O)[CH]1O" 
9PT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)ccc[n+]2CCCc3cn(nn3)[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O)O" 
9PT SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)ccc[n+]2CCCc3cn(nn3)C4C(C(C(C(O4)CO)O)OC5C(C(C(C(O5)CO)O)OC6C(C(C(C(O6)CO)O)O)O)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9PT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
;(2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-3,5-bis(oxidanyl)-6-[4-(3-quinolin-1-ium-1-ylpropyl)-1,2,3-triazol-1-yl]oxan-4-yl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-oxane-3,4,5-triol
;
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9PT "Create component" 2017-06-21 RCSB 
9PT "Initial release"  2018-05-02 RCSB 
# 
