data_6DT
# 
_chem_comp.id                                    6DT 
_chem_comp.name                                  "N-(4-((5-methyl-5H-pyrrolo[3,2-d]pyrimidin-4-yl)oxy)phenyl)-1H-benzimidazol-2-amine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H16 N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-04-11 
_chem_comp.pdbx_modified_date                    2016-06-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        356.381 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6DT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5B4K 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6DT C20 C1  C 0 1 Y N N -2.065 -4.528 -24.021 7.710  0.957  0.646  C20 6DT 1  
6DT C21 C2  C 0 1 Y N N -1.794 -5.457 -25.000 6.896  2.076  0.743  C21 6DT 2  
6DT C19 C3  C 0 1 Y N N -1.094 -4.050 -23.171 7.175  -0.270 0.316  C19 6DT 3  
6DT C22 C4  C 0 1 Y N N -0.536 -5.980 -25.201 5.543  1.977  0.511  C22 6DT 4  
6DT C11 C5  C 0 1 Y N N 5.617  -4.676 -21.770 0.334  -1.517 -1.495 C11 6DT 5  
6DT C13 C6  C 0 1 Y N N 3.699  -3.374 -21.275 1.060  -0.120 0.323  C13 6DT 6  
6DT C10 C7  C 0 1 Y N N 6.347  -3.963 -20.845 -0.918 -0.939 -1.439 C10 6DT 7  
6DT C14 C8  C 0 1 Y N N 4.413  -2.652 -20.345 -0.190 0.466  0.371  C14 6DT 8  
6DT C4  C9  C 0 1 Y N N 8.549  -1.993 -15.068 -6.980 0.355  0.530  C4  6DT 9  
6DT C3  C10 C 0 1 Y N N 9.216  -1.254 -16.019 -6.674 1.496  -0.116 C3  6DT 10 
6DT C26 C11 C 0 1 Y N N 5.585  -3.751 -16.137 -4.156 -1.973 1.227  C26 6DT 11 
6DT C18 C12 C 0 1 Y N N 0.181  -4.559 -23.353 5.813  -0.389 0.085  C18 6DT 12 
6DT C5  C13 C 0 1 Y N N 7.436  -2.585 -15.715 -5.737 -0.392 0.691  C5  6DT 13 
6DT C23 C14 C 0 1 Y N N 0.422  -5.491 -24.342 4.984  0.741  0.176  C23 6DT 14 
6DT C6  C15 C 0 1 Y N N 7.443  -2.198 -17.038 -4.733 0.394  0.095  C6  6DT 15 
6DT C12 C16 C 0 1 Y N N 4.287  -4.396 -21.993 1.327  -1.110 -0.614 C12 6DT 16 
6DT C9  C17 C 0 1 Y N N 5.737  -2.959 -20.133 -1.183 0.054  -0.506 C9  6DT 17 
6DT C7  C18 C 0 1 Y N N 6.464  -2.633 -17.903 -3.423 -0.090 0.107  C7  6DT 18 
6DT C16 C19 C 0 1 Y N N 2.275  -5.014 -23.224 3.715  -0.953 -0.349 C16 6DT 19 
6DT C1  C20 C 0 1 N N N 8.951  -0.749 -18.427 -4.648 2.623  -1.080 C1  6DT 20 
6DT N27 N1  N 0 1 Y N N 6.485  -3.389 -15.216 -5.405 -1.562 1.242  N27 6DT 21 
6DT N25 N2  N 0 1 Y N N 5.504  -3.434 -17.432 -3.185 -1.265 0.678  N25 6DT 22 
6DT N17 N3  N 0 1 Y N N 1.337  -4.273 -22.674 4.985  -1.447 -0.256 N17 6DT 23 
6DT N24 N4  N 0 1 Y N N 1.751  -5.769 -24.233 3.719  0.333  -0.104 N24 6DT 24 
6DT N2  N5  N 0 1 Y N N 8.537  -1.389 -17.197 -5.337 1.533  -0.384 N2  6DT 25 
6DT N15 N6  N 0 1 N N N 3.599  -5.146 -22.966 2.597  -1.696 -0.670 N15 6DT 26 
6DT O8  O1  O 0 1 N N N 6.481  -2.236 -19.221 -2.416 0.624  -0.452 O8  6DT 27 
6DT H1  H1  H 0 1 N N N -3.075 -4.161 -23.916 8.771  1.049  0.826  H1  6DT 28 
6DT H2  H2  H 0 1 N N N -2.601 -5.789 -25.636 7.327  3.032  1.002  H2  6DT 29 
6DT H3  H3  H 0 1 N N N -1.314 -3.320 -22.406 7.815  -1.137 0.238  H3  6DT 30 
6DT H4  H4  H 0 1 N N N -0.320 -6.711 -25.966 4.914  2.852  0.589  H4  6DT 31 
6DT H5  H5  H 0 1 N N N 6.095  -5.467 -22.329 0.540  -2.290 -2.221 H5  6DT 32 
6DT H6  H6  H 0 1 N N N 2.659  -3.136 -21.446 1.833  0.201  1.006  H6  6DT 33 
6DT H7  H7  H 0 1 N N N 7.390  -4.191 -20.681 -1.692 -1.259 -2.121 H7  6DT 34 
6DT H8  H8  H 0 1 N N N 3.940  -1.856 -19.790 -0.394 1.245  1.090  H8  6DT 35 
6DT H9  H9  H 0 1 N N N 8.822  -2.101 -14.029 -7.959 0.052  0.869  H9  6DT 36 
6DT H10 H10 H 0 1 N N N 10.113 -0.673 -15.862 -7.382 2.267  -0.382 H10 6DT 37 
6DT H11 H11 H 0 1 N N N 4.801  -4.401 -15.777 -3.916 -2.924 1.680  H11 6DT 38 
6DT H12 H12 H 0 1 N N N 9.864  -0.163 -18.247 -4.645 2.425  -2.152 H12 6DT 39 
6DT H13 H13 H 0 1 N N N 9.152  -1.516 -19.190 -5.165 3.563  -0.885 H13 6DT 40 
6DT H14 H14 H 0 1 N N N 8.151  -0.082 -18.780 -3.621 2.692  -0.720 H14 6DT 41 
6DT H15 H15 H 0 1 N N N 1.445  -3.631 -21.915 5.257  -2.366 -0.401 H15 6DT 42 
6DT H17 H17 H 0 1 N N N 4.118  -5.815 -23.498 2.692  -2.625 -0.934 H17 6DT 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6DT C22 C21 DOUB Y N 1  
6DT C22 C23 SING Y N 2  
6DT C21 C20 SING Y N 3  
6DT C23 N24 SING Y N 4  
6DT C23 C18 DOUB Y N 5  
6DT N24 C16 DOUB Y N 6  
6DT C20 C19 DOUB Y N 7  
6DT C18 C19 SING Y N 8  
6DT C18 N17 SING Y N 9  
6DT C16 N15 SING N N 10 
6DT C16 N17 SING Y N 11 
6DT N15 C12 SING N N 12 
6DT C12 C11 DOUB Y N 13 
6DT C12 C13 SING Y N 14 
6DT C11 C10 SING Y N 15 
6DT C13 C14 DOUB Y N 16 
6DT C10 C9  DOUB Y N 17 
6DT C14 C9  SING Y N 18 
6DT C9  O8  SING N N 19 
6DT O8  C7  SING N N 20 
6DT C1  N2  SING N N 21 
6DT C7  N25 DOUB Y N 22 
6DT C7  C6  SING Y N 23 
6DT N25 C26 SING Y N 24 
6DT N2  C6  SING Y N 25 
6DT N2  C3  SING Y N 26 
6DT C6  C5  DOUB Y N 27 
6DT C26 N27 DOUB Y N 28 
6DT C3  C4  DOUB Y N 29 
6DT C5  N27 SING Y N 30 
6DT C5  C4  SING Y N 31 
6DT C20 H1  SING N N 32 
6DT C21 H2  SING N N 33 
6DT C19 H3  SING N N 34 
6DT C22 H4  SING N N 35 
6DT C11 H5  SING N N 36 
6DT C13 H6  SING N N 37 
6DT C10 H7  SING N N 38 
6DT C14 H8  SING N N 39 
6DT C4  H9  SING N N 40 
6DT C3  H10 SING N N 41 
6DT C26 H11 SING N N 42 
6DT C1  H12 SING N N 43 
6DT C1  H13 SING N N 44 
6DT C1  H14 SING N N 45 
6DT N17 H15 SING N N 46 
6DT N15 H17 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6DT InChI            InChI                1.03  "InChI=1S/C20H16N6O/c1-26-11-10-17-18(26)19(22-12-21-17)27-14-8-6-13(7-9-14)23-20-24-15-4-2-3-5-16(15)25-20/h2-12H,1H3,(H2,23,24,25)" 
6DT InChIKey         InChI                1.03  YXAQBFXRVSBMEL-UHFFFAOYSA-N                                                                                                           
6DT SMILES_CANONICAL CACTVS               3.385 "Cn1ccc2ncnc(Oc3ccc(Nc4[nH]c5ccccc5n4)cc3)c12"                                                                                        
6DT SMILES           CACTVS               3.385 "Cn1ccc2ncnc(Oc3ccc(Nc4[nH]c5ccccc5n4)cc3)c12"                                                                                        
6DT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "Cn1ccc2c1c(ncn2)Oc3ccc(cc3)Nc4[nH]c5ccccc5n4"                                                                                        
6DT SMILES           "OpenEye OEToolkits" 2.0.4 "Cn1ccc2c1c(ncn2)Oc3ccc(cc3)Nc4[nH]c5ccccc5n4"                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6DT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{N}-[4-(5-methylpyrrolo[3,2-d]pyrimidin-4-yl)oxyphenyl]-1~{H}-benzimidazol-2-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6DT "Create component" 2016-04-11 PDBJ 
6DT "Initial release"  2016-06-29 RCSB 
# 
