data_5MT
# 
_chem_comp.id                                    5MT 
_chem_comp.name                                  "4-azanyl-6-[[(1~{S})-1-[6-fluoranyl-1-(3-methylsulfonylphenyl)benzimidazol-2-yl]ethyl]amino]pyrimidine-5-carbonitrile" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H18 F N7 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-10-22 
_chem_comp.pdbx_modified_date                    2015-12-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        451.477 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5MT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5EDS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5MT C20 C1  C 0 1 N N N 16.729 22.129 19.629 -3.961 -3.580 1.687  C20 5MT 1  
5MT S1  S1  S 0 1 N N N 18.380 21.597 20.045 -4.522 -2.517 0.328  S1  5MT 2  
5MT O1  O1  O 0 1 N N N 19.287 21.802 18.861 -5.111 -3.296 -0.704 O1  5MT 3  
5MT O2  O2  O 0 1 N N N 18.903 22.370 21.223 -5.173 -1.361 0.836  O2  5MT 4  
5MT C18 C2  C 0 1 Y N N 18.293 19.895 20.456 -3.035 -1.899 -0.389 C18 5MT 5  
5MT C19 C3  C 0 1 Y N N 19.125 18.976 19.818 -2.480 -0.724 0.079  C19 5MT 6  
5MT C17 C4  C 0 1 Y N N 17.379 19.464 21.420 -2.423 -2.594 -1.415 C17 5MT 7  
5MT C16 C5  C 0 1 Y N N 17.291 18.112 21.744 -1.256 -2.112 -1.980 C16 5MT 8  
5MT C15 C6  C 0 1 Y N N 18.120 17.195 21.101 -0.699 -0.935 -1.520 C15 5MT 9  
5MT C14 C7  C 0 1 Y N N 19.041 17.627 20.145 -1.309 -0.238 -0.486 C14 5MT 10 
5MT N5  N1  N 0 1 Y N N 19.840 16.767 19.525 -0.744 0.954  -0.014 N5  5MT 11 
5MT C9  C8  C 0 1 Y N N 19.656 16.362 18.283 -1.306 2.215  -0.091 C9  5MT 12 
5MT C10 C9  C 0 1 Y N N 18.692 16.643 17.319 -2.494 2.711  -0.607 C10 5MT 13 
5MT C11 C10 C 0 1 Y N N 18.767 16.036 16.066 -2.767 4.062  -0.524 C11 5MT 14 
5MT F1  F1  F 0 1 N N N 17.837 16.297 15.125 -3.925 4.545  -1.027 F1  5MT 15 
5MT C12 C11 C 0 1 Y N N 19.805 15.151 15.784 -1.859 4.928  0.073  C12 5MT 16 
5MT C13 C12 C 0 1 Y N N 20.770 14.882 16.750 -0.676 4.452  0.589  C13 5MT 17 
5MT C8  C13 C 0 1 Y N N 20.699 15.486 18.003 -0.385 3.088  0.514  C8  5MT 18 
5MT N6  N2  N 0 1 Y N N 21.473 15.402 19.086 0.669  2.332  0.921  N6  5MT 19 
5MT C7  C14 C 0 1 Y N N 20.936 16.183 20.017 0.460  1.086  0.613  C7  5MT 20 
5MT C6  C15 C 0 1 N N S 21.527 16.385 21.424 1.407  -0.048 0.911  C6  5MT 21 
5MT C21 C16 C 0 1 N N N 22.642 17.416 21.264 1.345  -0.385 2.402  C21 5MT 22 
5MT N4  N3  N 0 1 N N N 22.095 15.140 22.015 2.771  0.349  0.556  N4  5MT 23 
5MT C2  C17 C 0 1 Y N N 21.348 14.147 22.528 3.710  -0.612 0.242  C2  5MT 24 
5MT N2  N4  N 0 1 Y N N 20.016 14.256 22.514 3.388  -1.903 0.252  N2  5MT 25 
5MT C1  C18 C 0 1 Y N N 19.232 13.296 23.002 4.277  -2.828 -0.046 C1  5MT 26 
5MT N1  N5  N 0 1 Y N N 19.710 12.180 23.527 5.520  -2.534 -0.368 N1  5MT 27 
5MT C4  C19 C 0 1 Y N N 21.037 11.996 23.572 5.939  -1.272 -0.407 C4  5MT 28 
5MT N3  N6  N 0 1 N N N 21.522 10.874 24.088 7.244  -0.975 -0.746 N3  5MT 29 
5MT C3  C20 C 0 1 Y N N 21.894 12.976 23.074 5.026  -0.245 -0.101 C3  5MT 30 
5MT C5  C21 C 0 1 N N N 23.297 12.738 23.137 5.424  1.131  -0.133 C5  5MT 31 
5MT N7  N7  N 0 1 N N N 24.422 12.558 23.184 5.740  2.221  -0.159 N7  5MT 32 
5MT H1  H1  H 0 1 N N N 16.066 21.979 20.494 -3.383 -2.988 2.396  H1  5MT 33 
5MT H2  H2  H 0 1 N N N 16.745 23.195 19.359 -4.826 -4.010 2.192  H2  5MT 34 
5MT H3  H3  H 0 1 N N N 16.358 21.541 18.777 -3.338 -4.381 1.288  H3  5MT 35 
5MT H4  H4  H 0 1 N N N 19.832 19.310 19.073 -2.957 -0.184 0.884  H4  5MT 36 
5MT H5  H5  H 0 1 N N N 16.740 20.180 21.915 -2.856 -3.515 -1.776 H5  5MT 37 
5MT H6  H6  H 0 1 N N N 16.585 17.777 22.489 -0.780 -2.657 -2.782 H6  5MT 38 
5MT H7  H7  H 0 1 N N N 18.050 16.145 21.343 0.212  -0.560 -1.961 H7  5MT 39 
5MT H8  H8  H 0 1 N N N 17.888 17.329 17.541 -3.203 2.043  -1.072 H8  5MT 40 
5MT H9  H9  H 0 1 N N N 19.861 14.674 14.817 -2.084 5.983  0.132  H9  5MT 41 
5MT H10 H10 H 0 1 N N N 21.578 14.201 16.527 0.025  5.131  1.051  H10 5MT 42 
5MT H11 H11 H 0 1 N N N 20.749 16.791 22.087 1.120  -0.924 0.328  H11 5MT 43 
5MT H12 H12 H 0 1 N N N 23.109 17.607 22.242 0.330  -0.681 2.666  H12 5MT 44 
5MT H13 H13 H 0 1 N N N 23.399 17.031 20.565 2.030  -1.205 2.618  H13 5MT 45 
5MT H14 H14 H 0 1 N N N 22.221 18.353 20.870 1.632  0.490  2.984  H14 5MT 46 
5MT H15 H15 H 0 1 N N N 22.644 14.721 21.291 3.015  1.288  0.541  H15 5MT 47 
5MT H16 H16 H 0 1 N N N 18.161 13.435 22.968 3.976  -3.865 -0.026 H16 5MT 48 
5MT H17 H17 H 0 1 N N N 20.767 10.291 24.388 7.864  -1.689 -0.959 H17 5MT 49 
5MT H18 H18 H 0 1 N N N 22.059 10.393 23.395 7.540  -0.051 -0.772 H18 5MT 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5MT F1  C11 SING N N 1  
5MT C12 C11 DOUB Y N 2  
5MT C12 C13 SING Y N 3  
5MT C11 C10 SING Y N 4  
5MT C13 C8  DOUB Y N 5  
5MT C10 C9  DOUB Y N 6  
5MT C8  C9  SING Y N 7  
5MT C8  N6  SING Y N 8  
5MT C9  N5  SING Y N 9  
5MT O1  S1  DOUB N N 10 
5MT N6  C7  DOUB Y N 11 
5MT N5  C7  SING Y N 12 
5MT N5  C14 SING N N 13 
5MT C20 S1  SING N N 14 
5MT C19 C14 DOUB Y N 15 
5MT C19 C18 SING Y N 16 
5MT C7  C6  SING N N 17 
5MT S1  C18 SING N N 18 
5MT S1  O2  DOUB N N 19 
5MT C14 C15 SING Y N 20 
5MT C18 C17 DOUB Y N 21 
5MT C15 C16 DOUB Y N 22 
5MT C21 C6  SING N N 23 
5MT C17 C16 SING Y N 24 
5MT C6  N4  SING N N 25 
5MT N4  C2  SING N N 26 
5MT N2  C2  DOUB Y N 27 
5MT N2  C1  SING Y N 28 
5MT C2  C3  SING Y N 29 
5MT C1  N1  DOUB Y N 30 
5MT C3  C5  SING N N 31 
5MT C3  C4  DOUB Y N 32 
5MT C5  N7  TRIP N N 33 
5MT N1  C4  SING Y N 34 
5MT C4  N3  SING N N 35 
5MT C20 H1  SING N N 36 
5MT C20 H2  SING N N 37 
5MT C20 H3  SING N N 38 
5MT C19 H4  SING N N 39 
5MT C17 H5  SING N N 40 
5MT C16 H6  SING N N 41 
5MT C15 H7  SING N N 42 
5MT C10 H8  SING N N 43 
5MT C12 H9  SING N N 44 
5MT C13 H10 SING N N 45 
5MT C6  H11 SING N N 46 
5MT C21 H12 SING N N 47 
5MT C21 H13 SING N N 48 
5MT C21 H14 SING N N 49 
5MT N4  H15 SING N N 50 
5MT C1  H16 SING N N 51 
5MT N3  H17 SING N N 52 
5MT N3  H18 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5MT InChI            InChI                1.03  "InChI=1S/C21H18FN7O2S/c1-12(27-20-16(10-23)19(24)25-11-26-20)21-28-17-7-6-13(22)8-18(17)29(21)14-4-3-5-15(9-14)32(2,30)31/h3-9,11-12H,1-2H3,(H3,24,25,26,27)/t12-/m0/s1" 
5MT InChIKey         InChI                1.03  ARGMEIUNNDIMNN-LBPRGKRZSA-N                                                                                                                                               
5MT SMILES_CANONICAL CACTVS               3.385 "C[C@H](Nc1ncnc(N)c1C#N)c2nc3ccc(F)cc3n2c4cccc(c4)[S](C)(=O)=O"                                                                                                           
5MT SMILES           CACTVS               3.385 "C[CH](Nc1ncnc(N)c1C#N)c2nc3ccc(F)cc3n2c4cccc(c4)[S](C)(=O)=O"                                                                                                            
5MT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "C[C@@H](c1nc2ccc(cc2n1c3cccc(c3)S(=O)(=O)C)F)Nc4c(c(ncn4)N)C#N"                                                                                                          
5MT SMILES           "OpenEye OEToolkits" 2.0.4 "CC(c1nc2ccc(cc2n1c3cccc(c3)S(=O)(=O)C)F)Nc4c(c(ncn4)N)C#N"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5MT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "4-azanyl-6-[[(1~{S})-1-[6-fluoranyl-1-(3-methylsulfonylphenyl)benzimidazol-2-yl]ethyl]amino]pyrimidine-5-carbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5MT "Create component" 2015-10-22 RCSB 
5MT "Initial release"  2015-12-29 RCSB 
# 
