data_59T
# 
_chem_comp.id                                    59T 
_chem_comp.name                                  "8-[(trans-5-amino-1,3-dioxan-2-yl)methyl]-6-[2-chloro-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7(8H)-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H25 Cl N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-08-27 
_chem_comp.pdbx_modified_date                    2016-01-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        492.957 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     59T 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5DEY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
59T N3  N1  N  0 1 Y N N 1.089  -10.515 -12.111 6.122  1.052  -0.717 N3  59T 1  
59T C4  C1  C  0 1 Y N N 1.115  -9.939  -13.306 5.613  -0.050 -0.182 C4  59T 2  
59T C5  C2  C  0 1 Y N N 0.120  -9.028  -13.660 6.449  -1.042 0.329  C5  59T 3  
59T C6  C3  C  0 1 Y N N -0.892 -8.740  -12.754 7.820  -0.862 0.268  C6  59T 4  
59T C7  C4  C  0 1 Y N N -0.887 -9.366  -11.520 8.311  0.306  -0.301 C7  59T 5  
59T C8  C5  C  0 1 Y N N 2.225  -10.272 -14.237 4.142  -0.228 -0.125 C8  59T 6  
59T C10 C6  C  0 1 Y N N 3.684  -11.941 -15.188 2.234  -1.552 0.485  C10 59T 7  
59T C13 C7  C  0 1 Y N N 2.868  -9.278  -14.984 3.300  0.762  -0.633 C13 59T 8  
59T C15 C8  C  0 1 N N N 6.745  -11.606 -16.217 -0.875 0.004  1.017  C15 59T 9  
59T C20 C9  C  0 1 Y N N 8.874  -11.853 -20.367 -4.773 -1.984 -0.602 C20 59T 10 
59T C22 C10 C  0 1 Y N N 6.610  -11.393 -20.368 -2.798 -2.595 -1.625 C22 59T 11 
59T C24 C11 C  0 1 N N N 5.407  -11.207 -18.210 -0.704 -1.593 -0.830 C24 59T 12 
59T C26 C12 C  0 1 N N N 11.312 -12.135 -20.363 -6.843 -3.025 -1.444 C26 59T 13 
59T C28 C13 C  0 1 N N N 9.646  -10.913 -15.450 -3.427 1.935  1.452  C28 59T 14 
59T C1  C14 C  0 1 N N N 0.138  -10.919 -9.891  7.952  2.517  -1.406 C1  59T 15 
59T C2  C15 C  0 1 Y N N 0.133  -10.248 -11.233 7.424  1.248  -0.787 C2  59T 16 
59T C9  C16 C  0 1 Y N N 2.646  -11.595 -14.342 3.601  -1.387 0.432  C9  59T 17 
59T C11 C17 C  0 1 Y N N 4.325  -10.957 -15.947 1.391  -0.559 -0.020 C11 59T 18 
59T C12 C18 C  0 1 Y N N 3.910  -9.624  -15.828 1.934  0.598  -0.581 C12 59T 19 
59T C14 C19 C  0 1 N N N 5.470  -11.266 -16.850 -0.078 -0.736 0.036  C14 59T 20 
59T O16 O1  O  0 1 N N N 6.781  -11.697 -15.003 -0.327 0.768  1.791  O16 59T 21 
59T N17 N2  N  0 1 N N N 7.869  -11.793 -16.935 -2.212 -0.152 1.064  N17 59T 22 
59T C18 C20 C  0 1 Y N N 7.825  -11.716 -18.307 -2.848 -1.004 0.197  C18 59T 23 
59T N19 N3  N  0 1 Y N N 8.923  -11.924 -19.045 -4.167 -1.161 0.239  N19 59T 24 
59T N21 N4  N  0 1 Y N N 7.749  -11.595 -21.020 -4.110 -2.685 -1.516 N21 59T 25 
59T C23 C21 C  0 1 Y N N 6.598  -11.452 -18.963 -2.109 -1.731 -0.760 C23 59T 26 
59T N25 N5  N  0 1 N N N 10.036 -12.057 -21.082 -6.145 -2.121 -0.526 N25 59T 27 
59T C27 C22 C  0 1 N N N 9.135  -12.127 -16.254 -2.995 0.595  2.052  C27 59T 28 
59T O30 O2  O  0 1 N N N 10.880 -11.192 -14.781 -2.268 2.691  1.092  O30 59T 29 
59T C31 C23 C  0 1 N N N 11.378 -10.110 -13.976 -2.568 3.956  0.494  C31 59T 30 
59T C32 C24 C  0 1 N N N 11.527 -8.831  -14.807 -3.427 3.726  -0.754 C32 59T 31 
59T C34 C25 C  0 1 N N N 10.224 -8.593  -15.579 -4.657 2.900  -0.363 C34 59T 32 
59T O35 O3  O  0 1 N N N 9.843  -9.783  -16.290 -4.225 1.702  0.289  O35 59T 33 
59T N36 N6  N  0 1 N N N 11.762 -7.677  -13.922 -3.856 5.019  -1.302 N36 59T 34 
59T CL1 CL1 CL 0 0 N N N 4.154  -13.599 -15.281 1.560  -2.994 1.178  CL1 59T 35 
59T H1  H1  H  0 1 N N N 0.137  -8.551  -14.629 6.033  -1.938 0.765  H1  59T 36 
59T H2  H2  H  0 1 N N N -1.672 -8.038  -13.009 8.493  -1.612 0.656  H2  59T 37 
59T H3  H3  H  0 1 N N N -1.665 -9.168  -10.798 9.375  0.476  -0.362 H3  59T 38 
59T H4  H4  H  0 1 N N N 2.554  -8.248  -14.903 3.720  1.657  -1.068 H4  59T 39 
59T H5  H5  H  0 1 N N N 5.701  -11.185 -20.912 -2.266 -3.169 -2.371 H5  59T 40 
59T H6  H6  H  0 1 N N N 4.477  -10.980 -18.709 -0.134 -2.147 -1.561 H6  59T 41 
59T H7  H7  H  0 1 N N N 12.129 -12.299 -21.081 -6.666 -2.707 -2.471 H7  59T 42 
59T H8  H8  H  0 1 N N N 11.485 -11.194 -19.820 -6.470 -4.040 -1.308 H8  59T 43 
59T H9  H9  H  0 1 N N N 11.279 -12.970 -19.648 -7.912 -3.000 -1.235 H9  59T 44 
59T H10 H10 H  0 1 N N N 8.881  -10.670 -14.698 -4.009 2.491  2.187  H10 59T 45 
59T H11 H11 H  0 1 N N N 1.005  -11.592 -9.820  8.060  3.279  -0.634 H11 59T 46 
59T H12 H12 H  0 1 N N N 0.200  -10.157 -9.100  8.922  2.322  -1.862 H12 59T 47 
59T H13 H13 H  0 1 N N N -0.788 -11.500 -9.768  7.256  2.866  -2.168 H13 59T 48 
59T H14 H14 H  0 1 N N N 2.157  -12.359 -13.756 4.253  -2.154 0.822  H14 59T 49 
59T H15 H15 H  0 1 N N N 4.409  -8.857  -16.402 1.283  1.364  -0.974 H15 59T 50 
59T H16 H16 H  0 1 N N N 9.927  -12.918 -21.578 -6.646 -1.618 0.134  H16 59T 51 
59T H17 H17 H  0 1 N N N 8.967  -12.971 -15.569 -2.387 0.773  2.938  H17 59T 52 
59T H18 H18 H  0 1 N N N 9.888  -12.408 -17.005 -3.878 0.019  2.326  H18 59T 53 
59T H19 H19 H  0 1 N N N 10.676 -9.923  -13.150 -3.116 4.575  1.205  H19 59T 54 
59T H20 H20 H  0 1 N N N 12.360 -10.389 -13.566 -1.641 4.456  0.212  H20 59T 55 
59T H21 H21 H  0 1 N N N 12.360 -8.947  -15.516 -2.847 3.185  -1.502 H21 59T 56 
59T H22 H22 H  0 1 N N N 9.427  -8.322  -14.871 -5.285 3.478  0.315  H22 59T 57 
59T H23 H23 H  0 1 N N N 10.372 -7.773  -16.297 -5.225 2.644  -1.258 H23 59T 58 
59T H24 H24 H  0 1 N N N 11.858 -6.848  -14.473 -4.424 4.892  -2.126 H24 59T 59 
59T H25 H25 H  0 1 N N N 10.989 -7.574  -13.296 -4.345 5.562  -0.606 H25 59T 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
59T N3  C4  DOUB Y N 1  
59T N3  C2  SING Y N 2  
59T C4  C5  SING Y N 3  
59T C4  C8  SING N N 4  
59T C5  C6  DOUB Y N 5  
59T C6  C7  SING Y N 6  
59T C7  C2  DOUB Y N 7  
59T C8  C13 DOUB Y N 8  
59T C8  C9  SING Y N 9  
59T C10 C9  DOUB Y N 10 
59T C10 C11 SING Y N 11 
59T C10 CL1 SING N N 12 
59T C13 C12 SING Y N 13 
59T C15 C14 SING N N 14 
59T C15 O16 DOUB N N 15 
59T C15 N17 SING N N 16 
59T C20 N19 DOUB Y N 17 
59T C20 N21 SING Y N 18 
59T C20 N25 SING N N 19 
59T C22 N21 DOUB Y N 20 
59T C22 C23 SING Y N 21 
59T C24 C14 DOUB N N 22 
59T C24 C23 SING N N 23 
59T C26 N25 SING N N 24 
59T C28 O30 SING N N 25 
59T C28 O35 SING N N 26 
59T C1  C2  SING N N 27 
59T C11 C12 DOUB Y N 28 
59T C11 C14 SING N N 29 
59T N17 C18 SING N N 30 
59T N17 C27 SING N N 31 
59T C18 N19 SING Y N 32 
59T C18 C23 DOUB Y N 33 
59T O30 C31 SING N N 34 
59T C31 C32 SING N N 35 
59T C32 C34 SING N N 36 
59T C32 N36 SING N N 37 
59T C34 O35 SING N N 38 
59T C27 C28 SING N N 39 
59T C5  H1  SING N N 40 
59T C6  H2  SING N N 41 
59T C7  H3  SING N N 42 
59T C13 H4  SING N N 43 
59T C22 H5  SING N N 44 
59T C24 H6  SING N N 45 
59T C26 H7  SING N N 46 
59T C26 H8  SING N N 47 
59T C26 H9  SING N N 48 
59T C28 H10 SING N N 49 
59T C1  H11 SING N N 50 
59T C1  H12 SING N N 51 
59T C1  H13 SING N N 52 
59T C9  H14 SING N N 53 
59T C12 H15 SING N N 54 
59T N25 H16 SING N N 55 
59T C27 H17 SING N N 56 
59T C27 H18 SING N N 57 
59T C31 H19 SING N N 58 
59T C31 H20 SING N N 59 
59T C32 H21 SING N N 60 
59T C34 H22 SING N N 61 
59T C34 H23 SING N N 62 
59T N36 H24 SING N N 63 
59T N36 H25 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
59T SMILES           ACDLabs              12.01 "n1c(cccc1C)c2ccc(c(c2)Cl)C=3C(=O)N(c4nc(ncc4C=3)NC)CC5OCC(CO5)N"                                                                                                                           
59T InChI            InChI                1.03  "InChI=1S/C25H25ClN6O3/c1-14-4-3-5-21(30-14)15-6-7-18(20(26)9-15)19-8-16-10-29-25(28-2)31-23(16)32(24(19)33)11-22-34-12-17(27)13-35-22/h3-10,17,22H,11-13,27H2,1-2H3,(H,28,29,31)/t17-,22-" 
59T InChIKey         InChI                1.03  ZBCMHWUFWQFPLV-VVOJOOEHSA-N                                                                                                                                                                 
59T SMILES_CANONICAL CACTVS               3.385 "CNc1ncc2C=C(C(=O)N(C[C@H]3OC[C@H](N)CO3)c2n1)c4ccc(cc4Cl)c5cccc(C)n5"                                                                                                                      
59T SMILES           CACTVS               3.385 "CNc1ncc2C=C(C(=O)N(C[CH]3OC[CH](N)CO3)c2n1)c4ccc(cc4Cl)c5cccc(C)n5"                                                                                                                        
59T SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cc1cccc(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CC5OCC(CO5)N)NC"                                                                                                                              
59T SMILES           "OpenEye OEToolkits" 1.9.2 "Cc1cccc(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CC5OCC(CO5)N)NC"                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
59T "SYSTEMATIC NAME" ACDLabs              12.01 "8-[(trans-5-amino-1,3-dioxan-2-yl)methyl]-6-[2-chloro-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7(8H)-one" 
59T "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "8-[(5-azanyl-1,3-dioxan-2-yl)methyl]-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
59T "Create component" 2015-08-27 RCSB 
59T "Initial release"  2016-01-27 RCSB 
# 
