data_3OT
# 
_chem_comp.id                                    3OT 
_chem_comp.name                                  "2-methoxy-4-{1-[2-(morpholin-4-yl)ethyl]-2-(2-phenylethyl)-1H-benzimidazol-5-yl}cyclohepta-2,4,6-trien-1-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H31 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-09-30 
_chem_comp.pdbx_modified_date                    2015-10-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        469.575 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3OT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4WHW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3OT N3  N1  N 0 1 N N N -17.780 5.251  -1.928  -3.333 2.991  -0.073 N3  3OT 1  
3OT C4  C1  C 0 1 N N N -15.240 11.765 -6.140  4.403  -0.658 0.407  C4  3OT 2  
3OT N2  N2  N 0 1 Y N N -16.408 6.374  -5.161  -1.163 -0.031 0.242  N2  3OT 3  
3OT C7  C2  C 0 1 N N N -14.990 14.892 -6.270  7.316  -1.720 0.902  C7  3OT 4  
3OT C6  C3  C 0 1 N N N -15.662 14.123 -5.407  6.124  -2.187 1.413  C6  3OT 5  
3OT C9  C4  C 0 1 Y N N -15.540 10.352 -5.842  2.941  -0.426 0.397  C9  3OT 6  
3OT C13 C5  C 0 1 Y N N -16.154 8.155  -6.516  0.715  -1.158 -0.150 C13 3OT 7  
3OT C20 C6  C 0 1 N N N -18.831 2.957  -1.771  -4.812 4.820  -0.750 C20 3OT 8  
3OT C21 C7  C 0 1 N N N -17.561 3.813  -1.627  -3.758 3.813  -1.216 C21 3OT 9  
3OT C8  C8  C 0 1 N N N -14.143 14.532 -7.398  7.528  -0.642 0.026  C8  3OT 10 
3OT C18 C9  C 0 1 N N N -18.966 5.727  -1.169  -2.786 3.834  1.000  C18 3OT 11 
3OT C16 C10 C 0 1 N N N -16.465 5.534  -3.969  -2.133 0.986  0.657  C16 3OT 12 
3OT C19 C11 C 0 1 N N N -20.192 4.822  -1.373  -3.851 4.840  1.444  C19 3OT 13 
3OT C26 C12 C 0 1 Y N N -21.067 4.499  -5.717  -6.237 -4.642 -0.791 C26 3OT 14 
3OT C1  C13 C 0 1 N N N -12.453 11.955 -9.287  6.041  2.109  -1.955 C1  3OT 15 
3OT O1  O1  O 0 1 N N N -12.975 13.158 -8.778  7.001  1.224  -1.375 O1  3OT 16 
3OT C2  C14 C 0 1 N N N -13.875 13.118 -7.756  6.528  0.253  -0.557 C2  3OT 17 
3OT C3  C15 C 0 1 N N N -14.346 11.965 -7.240  5.161  0.227  -0.376 C3  3OT 18 
3OT C5  C16 C 0 1 N N N -15.804 12.702 -5.351  4.835  -1.719 1.195  C5  3OT 19 
3OT O2  O2  O 0 1 N N N -13.609 15.419 -8.057  8.691  -0.423 -0.286 O2  3OT 20 
3OT C10 C17 C 0 1 Y N N -15.482 9.922  -4.494  2.419  0.757  0.930  C10 3OT 21 
3OT C11 C18 C 0 1 Y N N -15.780 8.628  -4.128  1.072  0.984  0.927  C11 3OT 22 
3OT C12 C19 C 0 1 Y N N -16.115 7.746  -5.156  0.207  0.037  0.391  C12 3OT 23 
3OT C14 C20 C 0 1 Y N N -15.878 9.483  -6.861  2.091  -1.384 -0.144 C14 3OT 24 
3OT N1  N3  N 0 1 Y N N -16.467 7.063  -7.348  -0.350 -1.880 -0.584 N1  3OT 25 
3OT C15 C21 C 0 1 Y N N -16.604 6.015  -6.509  -1.447 -1.219 -0.358 C15 3OT 26 
3OT C17 C22 C 0 1 N N N -17.902 5.515  -3.389  -2.361 1.972  -0.490 C17 3OT 27 
3OT O3  O3  O 0 1 N N N -19.885 3.499  -1.020  -4.273 5.609  0.314  O3  3OT 28 
3OT C22 C23 C 0 1 N N N -16.866 4.626  -6.964  -2.833 -1.701 -0.703 C22 3OT 29 
3OT C23 C24 C 0 1 N N N -18.029 4.589  -7.955  -3.408 -2.487 0.477  C23 3OT 30 
3OT C24 C25 C 0 1 Y N N -19.292 5.000  -7.273  -4.793 -2.969 0.131  C24 3OT 31 
3OT C25 C26 C 0 1 Y N N -19.901 4.127  -6.374  -4.966 -4.200 -0.474 C25 3OT 32 
3OT C27 C27 C 0 1 Y N N -21.639 5.741  -5.966  -7.334 -3.852 -0.508 C27 3OT 33 
3OT C28 C28 C 0 1 Y N N -21.040 6.607  -6.872  -7.162 -2.621 0.097  C28 3OT 34 
3OT C29 C29 C 0 1 Y N N -19.863 6.246  -7.521  -5.892 -2.181 0.419  C29 3OT 35 
3OT H7  H2  H 0 1 N N N -15.092 15.954 -6.103  8.203  -2.250 1.217  H7  3OT 36 
3OT H6  H3  H 0 1 N N N -16.180 14.662 -4.628  6.203  -3.036 2.076  H6  3OT 37 
3OT H19 H4  H 0 1 N N N -19.124 2.922  -2.831  -5.088 5.469  -1.581 H19 3OT 38 
3OT H20 H5  H 0 1 N N N -18.621 1.938  -1.415  -5.694 4.286  -0.396 H20 3OT 39 
3OT H21 H6  H 0 1 N N N -16.799 3.424  -2.318  -2.897 4.347  -1.619 H21 3OT 40 
3OT H22 H7  H 0 1 N N N -17.197 3.725  -0.593  -4.183 3.171  -1.988 H22 3OT 41 
3OT H16 H8  H 0 1 N N N -18.716 5.747  -0.098  -2.502 3.207  1.846  H16 3OT 42 
3OT H15 H9  H 0 1 N N N -19.217 6.744  -1.506  -1.910 4.368  0.632  H15 3OT 43 
3OT H12 H10 H 0 1 N N N -16.168 4.509  -4.234  -3.076 0.504  0.916  H12 3OT 44 
3OT H11 H11 H 0 1 N N N -15.774 5.932  -3.212  -1.748 1.521  1.526  H11 3OT 45 
3OT H17 H12 H 0 1 N N N -21.018 5.183  -0.743  -4.705 4.307  1.861  H17 3OT 46 
3OT H18 H13 H 0 1 N N N -20.495 4.855  -2.430  -3.431 5.505  2.199  H18 3OT 47 
3OT H28 H14 H 0 1 N N N -21.529 3.823  -5.013  -6.371 -5.604 -1.264 H28 3OT 48 
3OT H2  H15 H 0 1 N N N -11.747 12.176 -10.101 6.552  2.837  -2.586 H2  3OT 49 
3OT H1  H16 H 0 1 N N N -11.929 11.414 -8.485  5.337  1.536  -2.559 H1  3OT 50 
3OT H3  H17 H 0 1 N N N -13.274 11.333 -9.673  5.502  2.630  -1.164 H3  3OT 51 
3OT H4  H18 H 0 1 N N N -14.000 11.064 -7.725  4.601  0.984  -0.904 H4  3OT 52 
3OT H5  H19 H 0 1 N N N -16.451 12.328 -4.571  4.055  -2.257 1.713  H5  3OT 53 
3OT H8  H20 H 0 1 N N N -15.196 10.630 -3.730  3.086  1.497  1.348  H8  3OT 54 
3OT H9  H21 H 0 1 N N N -15.756 8.312  -3.096  0.678  1.900  1.342  H9  3OT 55 
3OT H10 H22 H 0 1 N N N -15.928 9.816  -7.887  2.494  -2.297 -0.557 H10 3OT 56 
3OT H13 H23 H 0 1 N N N -18.390 6.486  -3.558  -2.745 1.436  -1.358 H13 3OT 57 
3OT H14 H24 H 0 1 N N N -18.492 4.720  -3.868  -1.418 2.454  -0.748 H14 3OT 58 
3OT H23 H25 H 0 1 N N N -17.115 4.002  -6.093  -3.473 -0.845 -0.916 H23 3OT 59 
3OT H24 H26 H 0 1 N N N -15.963 4.230  -7.453  -2.784 -2.346 -1.581 H24 3OT 60 
3OT H25 H27 H 0 1 N N N -18.142 3.567  -8.347  -2.768 -3.343 0.690  H25 3OT 61 
3OT H26 H28 H 0 1 N N N -17.822 5.279  -8.786  -3.456 -1.842 1.354  H26 3OT 62 
3OT H27 H29 H 0 1 N N N -19.465 3.157  -6.187  -4.108 -4.816 -0.700 H27 3OT 63 
3OT H29 H30 H 0 1 N N N -22.546 6.032  -5.457  -8.327 -4.196 -0.759 H29 3OT 64 
3OT H30 H31 H 0 1 N N N -21.491 7.567  -7.074  -8.020 -2.003 0.318  H30 3OT 65 
3OT H31 H32 H 0 1 N N N -19.394 6.929  -8.214  -5.757 -1.219 0.892  H31 3OT 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3OT C1  O1  SING N N 1  
3OT O1  C2  SING N N 2  
3OT O2  C8  DOUB N N 3  
3OT C23 C24 SING N N 4  
3OT C23 C22 SING N N 5  
3OT C2  C8  SING N N 6  
3OT C2  C3  DOUB N N 7  
3OT C29 C24 DOUB Y N 8  
3OT C29 C28 SING Y N 9  
3OT C8  C7  SING N N 10 
3OT N1  C13 SING Y N 11 
3OT N1  C15 DOUB Y N 12 
3OT C24 C25 SING Y N 13 
3OT C3  C4  SING N N 14 
3OT C22 C15 SING N N 15 
3OT C28 C27 DOUB Y N 16 
3OT C14 C13 DOUB Y N 17 
3OT C14 C9  SING Y N 18 
3OT C13 C12 SING Y N 19 
3OT C15 N2  SING Y N 20 
3OT C25 C26 DOUB Y N 21 
3OT C7  C6  DOUB N N 22 
3OT C4  C9  SING N N 23 
3OT C4  C5  DOUB N N 24 
3OT C27 C26 SING Y N 25 
3OT C9  C10 DOUB Y N 26 
3OT C6  C5  SING N N 27 
3OT N2  C12 SING Y N 28 
3OT N2  C16 SING N N 29 
3OT C12 C11 DOUB Y N 30 
3OT C10 C11 SING Y N 31 
3OT C16 C17 SING N N 32 
3OT C17 N3  SING N N 33 
3OT N3  C21 SING N N 34 
3OT N3  C18 SING N N 35 
3OT C20 C21 SING N N 36 
3OT C20 O3  SING N N 37 
3OT C19 C18 SING N N 38 
3OT C19 O3  SING N N 39 
3OT C7  H7  SING N N 40 
3OT C6  H6  SING N N 41 
3OT C20 H19 SING N N 42 
3OT C20 H20 SING N N 43 
3OT C21 H21 SING N N 44 
3OT C21 H22 SING N N 45 
3OT C18 H16 SING N N 46 
3OT C18 H15 SING N N 47 
3OT C16 H12 SING N N 48 
3OT C16 H11 SING N N 49 
3OT C19 H17 SING N N 50 
3OT C19 H18 SING N N 51 
3OT C26 H28 SING N N 52 
3OT C1  H2  SING N N 53 
3OT C1  H1  SING N N 54 
3OT C1  H3  SING N N 55 
3OT C3  H4  SING N N 56 
3OT C5  H5  SING N N 57 
3OT C10 H8  SING N N 58 
3OT C11 H9  SING N N 59 
3OT C14 H10 SING N N 60 
3OT C17 H13 SING N N 61 
3OT C17 H14 SING N N 62 
3OT C22 H23 SING N N 63 
3OT C22 H24 SING N N 64 
3OT C23 H25 SING N N 65 
3OT C23 H26 SING N N 66 
3OT C25 H27 SING N N 67 
3OT C27 H29 SING N N 68 
3OT C28 H30 SING N N 69 
3OT C29 H31 SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3OT SMILES           ACDLabs              12.01 "O=C1C=CC=C(C=C1OC)c2cc3nc(n(c3cc2)CCN4CCOCC4)CCc5ccccc5"                                                                                                              
3OT InChI            InChI                1.03  "InChI=1S/C29H31N3O3/c1-34-28-21-23(8-5-9-27(28)33)24-11-12-26-25(20-24)30-29(13-10-22-6-3-2-4-7-22)32(26)15-14-31-16-18-35-19-17-31/h2-9,11-12,20-21H,10,13-19H2,1H3" 
3OT InChIKey         InChI                1.03  ZSTNBLSPAMZIQD-UHFFFAOYSA-N                                                                                                                                            
3OT SMILES_CANONICAL CACTVS               3.385 "COC1=CC(=CC=CC1=O)c2ccc3n(CCN4CCOCC4)c(CCc5ccccc5)nc3c2"                                                                                                              
3OT SMILES           CACTVS               3.385 "COC1=CC(=CC=CC1=O)c2ccc3n(CCN4CCOCC4)c(CCc5ccccc5)nc3c2"                                                                                                              
3OT SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COC1=CC(=CC=CC1=O)c2ccc3c(c2)nc(n3CCN4CCOCC4)CCc5ccccc5"                                                                                                              
3OT SMILES           "OpenEye OEToolkits" 1.9.2 "COC1=CC(=CC=CC1=O)c2ccc3c(c2)nc(n3CCN4CCOCC4)CCc5ccccc5"                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3OT "SYSTEMATIC NAME" ACDLabs              12.01 "2-methoxy-4-{1-[2-(morpholin-4-yl)ethyl]-2-(2-phenylethyl)-1H-benzimidazol-5-yl}cyclohepta-2,4,6-trien-1-one" 
3OT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-methoxy-4-[1-(2-morpholin-4-ylethyl)-2-(2-phenylethyl)benzimidazol-5-yl]cyclohepta-2,4,6-trien-1-one"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3OT "Create component" 2014-09-30 RCSB 
3OT "Initial release"  2015-10-28 RCSB 
# 
