data_Z7S
#

_chem_comp.id                                   Z7S
_chem_comp.name                                 "N-[(2S,3S,4R,5R,6R)-4,5-dihydroxy-2,6-bis(hydroxymethyl)piperidin-3-yl]acetamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C9 H18 N2 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-04-12
_chem_comp.pdbx_modified_date                   2021-07-23
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       234.250
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Z7S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7MFK
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Z7S  CAA  C1   C  0  1  N  N  N  -12.507   9.870   -9.765   4.603  -0.692   0.176  CAA  Z7S   1  
Z7S  CAG  C2   C  0  1  N  N  N  -12.021  17.830   -8.638  -3.317   0.810  -0.521  CAG  Z7S   2  
Z7S  CAH  C3   C  0  1  N  N  N  -10.440  14.340  -10.613  -0.361  -1.904   0.863  CAH  Z7S   3  
Z7S  CAK  C4   C  0  1  N  N  N  -12.596  11.213   -9.040   3.295  -0.121  -0.308  CAK  Z7S   4  
Z7S  CAL  C5   C  0  1  N  N  R  -11.931  16.467   -9.319  -1.964   0.286  -0.036  CAL  Z7S   5  
Z7S  CAM  C6   C  0  1  N  N  S  -10.983  14.245   -9.181  -0.186  -1.286  -0.526  CAM  Z7S   6  
Z7S  CAN  C7   C  0  1  N  N  R  -13.324  15.879   -9.353  -0.967   1.444   0.044  CAN  Z7S   7  
Z7S  CAO  C8   C  0  1  N  N  R  -13.306  14.510  -10.019   0.390   0.912   0.510  CAO  Z7S   8  
Z7S  CAP  C9   C  0  1  N  N  S  -12.392  13.628   -9.211   0.864  -0.174  -0.460  CAP  Z7S   9  
Z7S  NAI  N1   N  0  1  N  N  N  -12.337  12.287   -9.798   2.135  -0.729   0.010  NAI  Z7S  10  
Z7S  NAJ  N2   N  0  1  N  N  N  -11.044  15.576   -8.555  -1.466  -0.726  -0.977  NAJ  Z7S  11  
Z7S  OAB  O1   O  0  1  N  N  N  -12.938  11.272   -7.858   3.286   0.886  -0.984  OAB  Z7S  12  
Z7S  OAC  O2   O  0  1  N  N  N  -12.518  17.660   -7.302  -4.279  -0.247  -0.484  OAC  Z7S  13  
Z7S  OAD  O3   O  0  1  N  N  N   -9.121  14.910  -10.589  -1.252  -3.018   0.780  OAD  Z7S  14  
Z7S  OAE  O4   O  0  1  N  N  N  -14.210  16.754  -10.065  -1.443   2.419   0.974  OAE  Z7S  15  
Z7S  OAF  O5   O  0  1  N  N  N  -14.623  13.944  -10.022   1.340   1.980   0.532  OAF  Z7S  16  
Z7S  H1   H1   H  0  1  N  N  N  -12.785   9.061   -9.074   5.425  -0.069  -0.179  H1   Z7S  17  
Z7S  H2   H2   H  0  1  N  N  N  -13.194   9.871  -10.624   4.609  -0.715   1.265  H2   Z7S  18  
Z7S  H3   H3   H  0  1  N  N  N  -11.478   9.712  -10.119   4.722  -1.705  -0.210  H3   Z7S  19  
Z7S  H4   H4   H  0  1  N  N  N  -11.022  18.290   -8.603  -3.645   1.623   0.127  H4   Z7S  20  
Z7S  H5   H5   H  0  1  N  N  N  -12.704  18.480   -9.205  -3.220   1.177  -1.543  H5   Z7S  21  
Z7S  H6   H6   H  0  1  N  N  N  -11.104  14.978  -11.215   0.607  -2.240   1.236  H6   Z7S  22  
Z7S  H7   H7   H  0  1  N  N  N  -10.397  13.334  -11.056  -0.773  -1.159   1.543  H7   Z7S  23  
Z7S  H8   H8   H  0  1  N  N  N  -11.555  16.592  -10.345  -2.080  -0.162   0.951  H8   Z7S  24  
Z7S  H9   H9   H  0  1  N  N  N  -10.322  13.590   -8.594   0.142  -2.054  -1.226  H9   Z7S  25  
Z7S  H10  H10  H  0  1  N  N  N  -13.678  15.758   -8.319  -0.861   1.901  -0.940  H10  Z7S  26  
Z7S  H11  H11  H  0  1  N  N  N  -12.920  14.605  -11.045   0.292   0.490   1.510  H11  Z7S  27  
Z7S  H12  H12  H  0  1  N  N  N  -12.771  13.565   -8.180   0.999   0.257  -1.452  H12  Z7S  28  
Z7S  H13  H13  H  0  1  N  N  N  -12.106  12.173  -10.764   2.143  -1.535   0.551  H13  Z7S  29  
Z7S  H14  H14  H  0  1  N  N  N  -10.125  15.970   -8.530  -2.149  -1.455  -1.120  H14  Z7S  30  
Z7S  H16  H16  H  0  1  N  N  N  -12.575  18.507   -6.875  -5.162   0.014  -0.779  H16  Z7S  31  
Z7S  H17  H17  H  0  1  N  N  N   -8.785  14.969  -11.476  -1.410  -3.460   1.625  H17  Z7S  32  
Z7S  H18  H18  H  0  1  N  N  N  -14.218  17.607   -9.646  -0.860   3.184   1.075  H18  Z7S  33  
Z7S  H19  H19  H  0  1  N  N  N  -14.601  13.091  -10.439   1.101   2.706   1.123  H19  Z7S  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Z7S  CAH  OAD  SING  N  N   1  
Z7S  CAH  CAM  SING  N  N   2  
Z7S  OAE  CAN  SING  N  N   3  
Z7S  OAF  CAO  SING  N  N   4  
Z7S  CAO  CAN  SING  N  N   5  
Z7S  CAO  CAP  SING  N  N   6  
Z7S  NAI  CAP  SING  N  N   7  
Z7S  NAI  CAK  SING  N  N   8  
Z7S  CAA  CAK  SING  N  N   9  
Z7S  CAN  CAL  SING  N  N  10  
Z7S  CAL  CAG  SING  N  N  11  
Z7S  CAL  NAJ  SING  N  N  12  
Z7S  CAP  CAM  SING  N  N  13  
Z7S  CAM  NAJ  SING  N  N  14  
Z7S  CAK  OAB  DOUB  N  N  15  
Z7S  CAG  OAC  SING  N  N  16  
Z7S  CAA  H1   SING  N  N  17  
Z7S  CAA  H2   SING  N  N  18  
Z7S  CAA  H3   SING  N  N  19  
Z7S  CAG  H4   SING  N  N  20  
Z7S  CAG  H5   SING  N  N  21  
Z7S  CAH  H6   SING  N  N  22  
Z7S  CAH  H7   SING  N  N  23  
Z7S  CAL  H8   SING  N  N  24  
Z7S  CAM  H9   SING  N  N  25  
Z7S  CAN  H10  SING  N  N  26  
Z7S  CAO  H11  SING  N  N  27  
Z7S  CAP  H12  SING  N  N  28  
Z7S  NAI  H13  SING  N  N  29  
Z7S  NAJ  H14  SING  N  N  30  
Z7S  OAC  H16  SING  N  N  31  
Z7S  OAD  H17  SING  N  N  32  
Z7S  OAE  H18  SING  N  N  33  
Z7S  OAF  H19  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Z7S  SMILES            ACDLabs               12.01  "OC1C(O)C(NC(C)=O)C(CO)NC1CO"  
Z7S  InChI             InChI                 1.03   "InChI=1S/C9H18N2O5/c1-4(14)10-7-5(2-12)11-6(3-13)8(15)9(7)16/h5-9,11-13,15-16H,2-3H2,1H3,(H,10,14)/t5-,6-,7+,8-,9-/m1/s1"  
Z7S  InChIKey          InChI                 1.03   GYKHMAHAJKZLAT-SYHAXYEDSA-N  
Z7S  SMILES_CANONICAL  CACTVS                3.385  "CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)N[C@@H]1CO"  
Z7S  SMILES            CACTVS                3.385  "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)N[CH]1CO"  
Z7S  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(=O)N[C@H]1[C@H](N[C@@H]([C@H]([C@@H]1O)O)CO)CO"  
Z7S  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(=O)NC1C(NC(C(C1O)O)CO)CO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Z7S  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(2S,3S,4R,5R,6R)-4,5-dihydroxy-2,6-bis(hydroxymethyl)piperidin-3-yl]acetamide"  
Z7S  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N}-[(2~{S},3~{S},4~{R},5~{R},6~{R})-2,6-bis(hydroxymethyl)-4,5-bis(oxidanyl)piperidin-3-yl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Z7S  "Create component"  2021-04-12  RCSB  
Z7S  "Initial release"   2021-07-28  RCSB  
##
