data_Y0S
# 
_chem_comp.id                                    Y0S 
_chem_comp.name                                  "N-[(3-methylthiophen-2-yl)methyl]benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H13 N O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-11-14 
_chem_comp.pdbx_modified_date                    2024-02-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        231.313 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y0S 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GRQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y0S C13 C1  C 0 1 Y N N N N N -28.713 -8.355 -26.956 -3.591 1.925  0.361  C13 Y0S 1  
Y0S C15 C2  C 0 1 Y N N N N N -29.825 -6.263 -27.305 -4.936 -0.024 -0.022 C15 Y0S 2  
Y0S C01 C3  C 0 1 N N N N N N -22.732 -2.918 -31.206 2.495  -0.748 2.321  C01 Y0S 3  
Y0S C02 C4  C 0 1 Y N N N N N -24.244 -2.936 -31.408 2.946  -0.127 1.024  C02 Y0S 4  
Y0S C03 C5  C 0 1 Y N N N N N -24.839 -2.428 -32.543 4.044  0.712  0.942  C03 Y0S 5  
Y0S C04 C6  C 0 1 Y N N N N N -26.228 -2.545 -32.546 4.307  1.176  -0.280 C04 Y0S 6  
Y0S C06 C7  C 0 1 Y N N N N N -25.072 -3.474 -30.445 2.321  -0.349 -0.133 C06 Y0S 7  
Y0S C07 C8  C 0 1 N N N N N N -24.652 -4.084 -29.107 1.109  -1.226 -0.311 C07 Y0S 8  
Y0S C09 C9  C 0 1 N N N N N N -26.256 -5.939 -28.659 -1.317 -1.001 -0.249 C09 Y0S 9  
Y0S C11 C10 C 0 1 Y N N N N N -27.532 -6.528 -28.008 -2.541 -0.191 -0.071 C11 Y0S 10 
Y0S C12 C11 C 0 1 Y N N N N N -27.561 -7.836 -27.531 -2.445 1.174  0.201  C12 Y0S 11 
Y0S C14 C12 C 0 1 Y N N N N N -29.848 -7.568 -26.841 -4.834 1.328  0.253  C14 Y0S 12 
Y0S C16 C13 C 0 1 Y N N N N N -28.675 -5.751 -27.888 -3.798 -0.786 -0.189 C16 Y0S 13 
Y0S N08 N1  N 0 1 N N N N N N -25.857 -4.554 -28.444 -0.104 -0.424 -0.134 N08 Y0S 14 
Y0S O10 O1  O 0 1 N N N N N N -25.547 -6.598 -29.357 -1.404 -2.187 -0.499 O10 Y0S 15 
Y0S S05 S1  S 0 1 Y N N N N N -26.681 -3.317 -31.065 3.127  0.541  -1.419 S05 Y0S 16 
Y0S H1  H1  H 0 1 N N N N N N -28.725 -9.374 -26.598 -3.517 2.981  0.576  H1  Y0S 17 
Y0S H2  H2  H 0 1 N N N N N N -30.704 -5.643 -27.213 -5.910 -0.485 -0.106 H2  Y0S 18 
Y0S H3  H3  H 0 1 N N N N N N -22.440 -1.985 -30.702 2.997  -1.705 2.459  H3  Y0S 19 
Y0S H4  H4  H 0 1 N N N N N N -22.435 -3.777 -30.587 2.746  -0.083 3.148  H4  Y0S 20 
Y0S H5  H5  H 0 1 N N N N N N -22.231 -2.979 -32.183 1.417  -0.903 2.294  H5  Y0S 21 
Y0S H6  H6  H 0 1 N N N N N N -24.282 -1.982 -33.353 4.642  0.973  1.804  H6  Y0S 22 
Y0S H7  H7  H 0 1 N N N N N N -26.897 -2.215 -33.327 5.121  1.840  -0.532 H7  Y0S 23 
Y0S H8  H8  H 0 1 N N N N N N -23.964 -4.926 -29.277 1.116  -1.657 -1.312 H8  Y0S 24 
Y0S H9  H9  H 0 1 N N N N N N -24.155 -3.324 -28.487 1.126  -2.025 0.430  H9  Y0S 25 
Y0S H10 H10 H 0 1 N N N N N N -26.678 -8.453 -27.609 -1.475 1.642  0.286  H10 Y0S 26 
Y0S H11 H11 H 0 1 N N N N N N -30.745 -7.970 -26.392 -5.728 1.919  0.383  H11 Y0S 27 
Y0S H12 H12 H 0 1 N N N N N N -28.669 -4.735 -28.253 -3.880 -1.840 -0.411 H12 Y0S 28 
Y0S H13 H13 H 0 1 N N N N N N -26.395 -3.947 -27.859 -0.035 0.523  0.065  H13 Y0S 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y0S C04 C03 DOUB Y N 1  
Y0S C04 S05 SING Y N 2  
Y0S C03 C02 SING Y N 3  
Y0S C02 C01 SING N N 4  
Y0S C02 C06 DOUB Y N 5  
Y0S S05 C06 SING Y N 6  
Y0S C06 C07 SING N N 7  
Y0S O10 C09 DOUB N N 8  
Y0S C07 N08 SING N N 9  
Y0S C09 N08 SING N N 10 
Y0S C09 C11 SING N N 11 
Y0S C11 C16 DOUB Y N 12 
Y0S C11 C12 SING Y N 13 
Y0S C16 C15 SING Y N 14 
Y0S C12 C13 DOUB Y N 15 
Y0S C15 C14 DOUB Y N 16 
Y0S C13 C14 SING Y N 17 
Y0S C13 H1  SING N N 18 
Y0S C15 H2  SING N N 19 
Y0S C01 H3  SING N N 20 
Y0S C01 H4  SING N N 21 
Y0S C01 H5  SING N N 22 
Y0S C03 H6  SING N N 23 
Y0S C04 H7  SING N N 24 
Y0S C07 H8  SING N N 25 
Y0S C07 H9  SING N N 26 
Y0S C12 H10 SING N N 27 
Y0S C14 H11 SING N N 28 
Y0S C16 H12 SING N N 29 
Y0S N08 H13 SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y0S SMILES           ACDLabs              12.01 "Cc1ccsc1CNC(=O)c1ccccc1"                                                                  
Y0S InChI            InChI                1.06  "InChI=1S/C13H13NOS/c1-10-7-8-16-12(10)9-14-13(15)11-5-3-2-4-6-11/h2-8H,9H2,1H3,(H,14,15)" 
Y0S InChIKey         InChI                1.06  WNIZEKJOPGQRGN-UHFFFAOYSA-N                                                                
Y0S SMILES_CANONICAL CACTVS               3.385 "Cc1ccsc1CNC(=O)c2ccccc2"                                                                  
Y0S SMILES           CACTVS               3.385 "Cc1ccsc1CNC(=O)c2ccccc2"                                                                  
Y0S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccsc1CNC(=O)c2ccccc2"                                                                  
Y0S SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccsc1CNC(=O)c2ccccc2"                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y0S "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(3-methylthiophen-2-yl)methyl]benzamide"    
Y0S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(3-methylthiophen-2-yl)methyl]benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y0S "Create component" 2023-11-14 RCSB 
Y0S "Initial release"  2024-02-14 RCSB 
# 
