data_X6S
#

_chem_comp.id                                   X6S
_chem_comp.name                                 "tert-butyl [(2S)-1-(naphthalen-1-yl)-3-{[(2R)-1-oxo-3-phenyl-1-{[3-(pyridin-3-yl)propyl]amino}propan-2-yl]sulfanyl}propan-2-yl]carbamate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C35 H41 N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-12-01
_chem_comp.pdbx_modified_date                   2021-01-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       583.783
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    X6S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7KVO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
X6S  C12  C1   C  0  1  N  N  R  2.711  -18.155  -46.579   -0.518  -0.455  -0.409  C12  X6S   1  
X6S  C10  C2   C  0  1  N  N  N  2.613  -15.567  -44.867    2.230   0.146  -0.021  C10  X6S   2  
X6S  C14  C3   C  0  1  Y  N  N  2.337  -20.012  -48.234   -1.485  -2.366   0.841  C14  X6S   3  
X6S  C15  C4   C  0  1  Y  N  N  1.405  -20.997  -48.557   -2.576  -2.951   0.226  C15  X6S   4  
X6S  C17  C5   C  0  1  Y  N  N  3.170  -22.535  -49.141   -3.643  -3.202   2.354  C17  X6S   5  
X6S  C20  C6   C  0  1  N  N  N  2.075  -18.646  -45.285   -1.725  -0.362  -1.306  C20  X6S   6  
X6S  C01  C7   C  0  1  N  N  N  7.212  -13.335  -46.213    3.434   5.239   1.789  C01  X6S   7  
X6S  C02  C8   C  0  1  N  N  N  6.751  -12.269  -45.218    2.281   5.197   0.784  C02  X6S   8  
X6S  C03  C9   C  0  1  N  N  N  7.970  -11.413  -44.827    1.014   4.698   1.482  C03  X6S   9  
X6S  C04  C10  C  0  1  N  N  N  5.729  -11.314  -45.853    2.037   6.602   0.228  C04  X6S  10  
X6S  C06  C11  C  0  1  N  N  N  5.036  -13.564  -44.075    2.910   3.024   0.023  C06  X6S  11  
X6S  C09  C12  C  0  1  N  N  S  3.956  -15.851  -44.108    3.515   0.746  -0.593  C09  X6S  12  
X6S  C13  C13  C  0  1  N  N  N  1.913  -18.675  -47.756   -0.310  -1.910   0.016  C13  X6S  13  
X6S  C16  C14  C  0  1  Y  N  N  1.816  -22.248  -49.005   -3.655  -3.369   0.982  C16  X6S  14  
X6S  C18  C15  C  0  1  Y  N  N  4.100  -21.563  -48.804   -2.555  -2.613   2.969  C18  X6S  15  
X6S  C19  C16  C  0  1  Y  N  N  3.692  -20.314  -48.362   -1.476  -2.194   2.213  C19  X6S  16  
X6S  C23  C17  C  0  1  N  N  N  2.195  -20.033  -43.136   -4.130  -0.156  -1.642  C23  X6S  17  
X6S  C24  C18  C  0  1  N  N  N  1.398  -21.362  -43.186   -5.393  -0.034  -0.786  C24  X6S  18  
X6S  C25  C19  C  0  1  N  N  N  2.206  -22.663  -43.094   -6.618   0.061  -1.697  C25  X6S  19  
X6S  C26  C20  C  0  1  Y  N  N  3.330  -22.700  -42.078   -7.862   0.182  -0.855  C26  X6S  20  
X6S  C27  C21  C  0  1  Y  N  N  4.671  -22.473  -42.398   -8.543  -0.953  -0.441  C27  X6S  21  
X6S  C28  C22  C  0  1  Y  N  N  5.668  -22.522  -41.419   -9.682  -0.793   0.333  C28  X6S  22  
X6S  C29  C23  C  0  1  Y  N  N  5.304  -22.804  -40.101  -10.099   0.482   0.663  C29  X6S  23  
X6S  C31  C24  C  0  1  Y  N  N  3.076  -22.973  -40.719   -8.336   1.425  -0.481  C31  X6S  24  
X6S  C32  C25  C  0  1  N  N  N  3.750  -15.786  -42.546    4.632   0.646   0.448  C32  X6S  25  
X6S  C33  C26  C  0  1  Y  N  N  4.096  -16.991  -41.709    4.966  -0.803   0.689  C33  X6S  26  
X6S  C34  C27  C  0  1  Y  N  N  5.427  -17.536  -41.614    5.830  -1.484  -0.185  C34  X6S  27  
X6S  C35  C28  C  0  1  Y  N  N  6.527  -16.977  -42.303    6.401  -0.840  -1.296  C35  X6S  28  
X6S  C36  C29  C  0  1  Y  N  N  7.779  -17.514  -42.199    7.234  -1.531  -2.120  C36  X6S  29  
X6S  C37  C30  C  0  1  Y  N  N  8.027  -18.642  -41.397    7.531  -2.872  -1.881  C37  X6S  30  
X6S  C38  C31  C  0  1  Y  N  N  6.994  -19.209  -40.714    6.997  -3.528  -0.815  C38  X6S  31  
X6S  C39  C32  C  0  1  Y  N  N  5.693  -18.659  -40.820    6.133  -2.847   0.059  C39  X6S  32  
X6S  C40  C33  C  0  1  Y  N  N  4.653  -19.279  -40.096    5.562  -3.491   1.170  C40  X6S  33  
X6S  C41  C34  C  0  1  Y  N  N  3.399  -18.759  -40.189    4.729  -2.800   1.995  C41  X6S  34  
X6S  C42  C35  C  0  1  Y  N  N  3.122  -17.626  -40.983    4.436  -1.459   1.758  C42  X6S  35  
X6S  N08  N1   N  0  1  N  N  N  5.020  -14.905  -44.509    3.289   2.153  -0.933  N08  X6S  36  
X6S  N22  N2   N  0  1  N  N  N  2.727  -19.519  -44.387   -2.957  -0.247  -0.769  N22  X6S  37  
X6S  N30  N3   N  0  1  Y  N  N  4.016  -23.029  -39.748   -9.427   1.539   0.251  N30  X6S  38  
X6S  O05  O1   O  0  1  N  N  N  6.287  -12.956  -44.030    2.621   4.298  -0.304  O05  X6S  39  
X6S  O07  O2   O  0  1  N  N  N  4.036  -12.944  -43.761    2.829   2.660   1.179  O07  X6S  40  
X6S  O21  O3   O  0  1  N  N  N  0.941  -18.313  -44.964   -1.589  -0.391  -2.511  O21  X6S  41  
X6S  S11  S1   S  0  1  N  N  N  2.622  -16.281  -46.585    0.947   0.129  -1.304  S11  X6S  42  
X6S  H1   H1   H  0  1  N  N  N  3.772  -18.437  -46.645   -0.674   0.163   0.476  H1   X6S  43  
X6S  H2   H2   H  0  1  N  N  N  2.466  -14.479  -44.935    2.422  -0.873   0.314  H2   X6S  44  
X6S  H3   H3   H  0  1  N  N  N  1.783  -16.014  -44.300    1.892   0.748   0.822  H3   X6S  45  
X6S  H4   H4   H  0  1  N  N  N  0.350  -20.786  -48.458   -2.585  -3.082  -0.846  H4   X6S  46  
X6S  H5   H5   H  0  1  N  N  N  3.492  -23.500  -49.503   -4.486  -3.529   2.945  H5   X6S  47  
X6S  H6   H6   H  0  1  N  N  N  7.941  -14.000  -45.727    3.653   4.228   2.134  H6   X6S  48  
X6S  H7   H7   H  0  1  N  N  N  6.345  -13.924  -46.547    4.318   5.660   1.310  H7   X6S  49  
X6S  H8   H8   H  0  1  N  N  N  7.681  -12.848  -47.081    3.152   5.860   2.640  H8   X6S  50  
X6S  H9   H9   H  0  1  N  N  N  7.660  -10.638  -44.110    0.760   5.372   2.299  H9   X6S  51  
X6S  H10  H10  H  0  1  N  N  N  8.735  -12.054  -44.365    0.193   4.668   0.766  H10  X6S  52  
X6S  H11  H11  H  0  1  N  N  N  8.386  -10.935  -45.726    1.188   3.697   1.878  H11  X6S  53  
X6S  H12  H12  H  0  1  N  N  N  5.419  -10.562  -45.112    2.940   6.957  -0.269  H12  X6S  54  
X6S  H13  H13  H  0  1  N  N  N  6.186  -10.810  -46.718    1.216   6.571  -0.488  H13  X6S  55  
X6S  H14  H14  H  0  1  N  N  N  4.850  -11.886  -46.184    1.783   7.276   1.046  H14  X6S  56  
X6S  H15  H15  H  0  1  N  N  N  4.275  -16.873  -44.361    3.805   0.198  -1.490  H15  X6S  57  
X6S  H16  H16  H  0  1  N  N  N  2.019  -17.962  -48.587   -0.222  -2.539  -0.870  H16  X6S  58  
X6S  H17  H17  H  0  1  N  N  N  0.856  -18.735  -47.457    0.602  -1.988   0.609  H17  X6S  59  
X6S  H18  H18  H  0  1  N  N  N  1.080  -23.000  -49.248   -4.507  -3.826   0.501  H18  X6S  60  
X6S  H19  H19  H  0  1  N  N  N  5.154  -21.782  -48.887   -2.545  -2.482   4.041  H19  X6S  61  
X6S  H20  H20  H  0  1  N  N  N  4.432  -19.567  -48.114   -0.625  -1.734   2.693  H20  X6S  62  
X6S  H21  H21  H  0  1  N  N  N  3.045  -20.185  -42.455   -4.194  -1.053  -2.258  H21  X6S  63  
X6S  H22  H22  H  0  1  N  N  N  1.526  -19.264  -42.722   -4.039   0.720  -2.283  H22  X6S  64  
X6S  H23  H23  H  0  1  N  N  N  0.686  -21.354  -42.348   -5.484  -0.910  -0.145  H23  X6S  65  
X6S  H24  H24  H  0  1  N  N  N  0.845  -21.382  -44.137   -5.328   0.863  -0.170  H24  X6S  66  
X6S  H25  H25  H  0  1  N  N  N  1.505  -23.473  -42.844   -6.528   0.937  -2.339  H25  X6S  67  
X6S  H26  H26  H  0  1  N  N  N  2.646  -22.852  -44.084   -6.683  -0.836  -2.314  H26  X6S  68  
X6S  H27  H27  H  0  1  N  N  N  4.942  -22.256  -43.420   -8.193  -1.938  -0.715  H27  X6S  69  
X6S  H28  H28  H  0  1  N  N  N  6.701  -22.345  -41.678  -10.238  -1.655   0.673  H28  X6S  70  
X6S  H29  H29  H  0  1  N  N  N  6.071  -22.844  -39.342  -10.986   0.615   1.265  H29  X6S  71  
X6S  H30  H30  H  0  1  N  N  N  2.051  -23.151  -40.430   -7.809   2.314  -0.796  H30  X6S  72  
X6S  H31  H31  H  0  1  N  N  N  4.362  -14.950  -42.175    5.517   1.167   0.083  H31  X6S  73  
X6S  H32  H32  H  0  1  N  N  N  2.686  -15.567  -42.371    4.301   1.103   1.381  H32  X6S  74  
X6S  H33  H33  H  0  1  N  N  N  6.375  -16.107  -42.925    6.180   0.199  -1.494  H33  X6S  75  
X6S  H34  H34  H  0  1  N  N  N  8.595  -17.063  -42.744    7.672  -1.034  -2.973  H34  X6S  76  
X6S  H35  H35  H  0  1  N  N  N  9.023  -19.053  -41.324    8.195  -3.398  -2.551  H35  X6S  77  
X6S  H36  H36  H  0  1  N  N  N  7.166  -20.076  -40.093    7.236  -4.567  -0.643  H36  X6S  78  
X6S  H37  H37  H  0  1  N  N  N  4.848  -20.146  -39.482    5.784  -4.530   1.368  H37  X6S  79  
X6S  H38  H38  H  0  1  N  N  N  2.594  -19.226  -39.640    4.292  -3.298   2.848  H38  X6S  80  
X6S  H39  H39  H  0  1  N  N  N  2.111  -17.247  -41.020    3.776  -0.932   2.431  H39  X6S  81  
X6S  H40  H40  H  0  1  N  N  N  5.753  -15.228  -45.108    3.412   2.457  -1.846  H40  X6S  82  
X6S  H41  H41  H  0  1  N  N  N  3.649  -19.814  -44.637   -3.065  -0.223   0.194  H41  X6S  83  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
X6S  C17  C16  DOUB  Y  N   1  
X6S  C17  C18  SING  Y  N   2  
X6S  C16  C15  SING  Y  N   3  
X6S  C18  C19  DOUB  Y  N   4  
X6S  C15  C14  DOUB  Y  N   5  
X6S  C19  C14  SING  Y  N   6  
X6S  C14  C13  SING  N  N   7  
X6S  C13  C12  SING  N  N   8  
X6S  S11  C12  SING  N  N   9  
X6S  S11  C10  SING  N  N  10  
X6S  C12  C20  SING  N  N  11  
X6S  C01  C02  SING  N  N  12  
X6S  C04  C02  SING  N  N  13  
X6S  C20  O21  DOUB  N  N  14  
X6S  C20  N22  SING  N  N  15  
X6S  C02  C03  SING  N  N  16  
X6S  C02  O05  SING  N  N  17  
X6S  C10  C09  SING  N  N  18  
X6S  N08  C09  SING  N  N  19  
X6S  N08  C06  SING  N  N  20  
X6S  N22  C23  SING  N  N  21  
X6S  C09  C32  SING  N  N  22  
X6S  C06  O05  SING  N  N  23  
X6S  C06  O07  DOUB  N  N  24  
X6S  C24  C23  SING  N  N  25  
X6S  C24  C25  SING  N  N  26  
X6S  C25  C26  SING  N  N  27  
X6S  C32  C33  SING  N  N  28  
X6S  C27  C26  DOUB  Y  N  29  
X6S  C27  C28  SING  Y  N  30  
X6S  C35  C36  DOUB  Y  N  31  
X6S  C35  C34  SING  Y  N  32  
X6S  C36  C37  SING  Y  N  33  
X6S  C26  C31  SING  Y  N  34  
X6S  C33  C34  DOUB  Y  N  35  
X6S  C33  C42  SING  Y  N  36  
X6S  C34  C39  SING  Y  N  37  
X6S  C28  C29  DOUB  Y  N  38  
X6S  C37  C38  DOUB  Y  N  39  
X6S  C42  C41  DOUB  Y  N  40  
X6S  C39  C38  SING  Y  N  41  
X6S  C39  C40  DOUB  Y  N  42  
X6S  C31  N30  DOUB  Y  N  43  
X6S  C41  C40  SING  Y  N  44  
X6S  C29  N30  SING  Y  N  45  
X6S  C12  H1   SING  N  N  46  
X6S  C10  H2   SING  N  N  47  
X6S  C10  H3   SING  N  N  48  
X6S  C15  H4   SING  N  N  49  
X6S  C17  H5   SING  N  N  50  
X6S  C01  H6   SING  N  N  51  
X6S  C01  H7   SING  N  N  52  
X6S  C01  H8   SING  N  N  53  
X6S  C03  H9   SING  N  N  54  
X6S  C03  H10  SING  N  N  55  
X6S  C03  H11  SING  N  N  56  
X6S  C04  H12  SING  N  N  57  
X6S  C04  H13  SING  N  N  58  
X6S  C04  H14  SING  N  N  59  
X6S  C09  H15  SING  N  N  60  
X6S  C13  H16  SING  N  N  61  
X6S  C13  H17  SING  N  N  62  
X6S  C16  H18  SING  N  N  63  
X6S  C18  H19  SING  N  N  64  
X6S  C19  H20  SING  N  N  65  
X6S  C23  H21  SING  N  N  66  
X6S  C23  H22  SING  N  N  67  
X6S  C24  H23  SING  N  N  68  
X6S  C24  H24  SING  N  N  69  
X6S  C25  H25  SING  N  N  70  
X6S  C25  H26  SING  N  N  71  
X6S  C27  H27  SING  N  N  72  
X6S  C28  H28  SING  N  N  73  
X6S  C29  H29  SING  N  N  74  
X6S  C31  H30  SING  N  N  75  
X6S  C32  H31  SING  N  N  76  
X6S  C32  H32  SING  N  N  77  
X6S  C35  H33  SING  N  N  78  
X6S  C36  H34  SING  N  N  79  
X6S  C37  H35  SING  N  N  80  
X6S  C38  H36  SING  N  N  81  
X6S  C40  H37  SING  N  N  82  
X6S  C41  H38  SING  N  N  83  
X6S  C42  H39  SING  N  N  84  
X6S  N08  H40  SING  N  N  85  
X6S  N22  H41  SING  N  N  86  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
X6S  SMILES            ACDLabs               12.01  "C(C(=O)NCCCc1cnccc1)(Cc2ccccc2)SCC(Cc4c3c(cccc3)ccc4)NC(OC(C)(C)C)=O"  
X6S  InChI             InChI                 1.03   "InChI=1S/C35H41N3O3S/c1-35(2,3)41-34(40)38-30(23-29-18-9-17-28-16-7-8-19-31(28)29)25-42-32(22-26-12-5-4-6-13-26)33(39)37-21-11-15-27-14-10-20-36-24-27/h4-10,12-14,16-20,24,30,32H,11,15,21-23,25H2,1-3H3,(H,37,39)(H,38,40)/t30-,32+/m0/s1"  
X6S  InChIKey          InChI                 1.03   XDOKSTKEPWQDPB-XDFJSJKPSA-N  
X6S  SMILES_CANONICAL  CACTVS                3.385  "CC(C)(C)OC(=O)N[C@H](CS[C@H](Cc1ccccc1)C(=O)NCCCc2cccnc2)Cc3cccc4ccccc34"  
X6S  SMILES            CACTVS                3.385  "CC(C)(C)OC(=O)N[CH](CS[CH](Cc1ccccc1)C(=O)NCCCc2cccnc2)Cc3cccc4ccccc34"  
X6S  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)(C)OC(=O)N[C@@H](Cc1cccc2c1cccc2)CS[C@H](Cc3ccccc3)C(=O)NCCCc4cccnc4"  
X6S  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)(C)OC(=O)NC(Cc1cccc2c1cccc2)CSC(Cc3ccccc3)C(=O)NCCCc4cccnc4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
X6S  "SYSTEMATIC NAME"  ACDLabs               12.01  "tert-butyl [(2S)-1-(naphthalen-1-yl)-3-{[(2R)-1-oxo-3-phenyl-1-{[3-(pyridin-3-yl)propyl]amino}propan-2-yl]sulfanyl}propan-2-yl]carbamate"  
X6S  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{tert}-butyl ~{N}-[(2~{S})-1-naphthalen-1-yl-3-[(2~{R})-1-oxidanylidene-3-phenyl-1-(3-pyridin-3-ylpropylamino)propan-2-yl]sulfanyl-propan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
X6S  "Create component"  2020-12-01  RCSB  
X6S  "Initial release"   2021-01-20  RCSB  
##
