data_V1S
#

_chem_comp.id                                   V1S
_chem_comp.name                                 "(1S)-N-{(1S)-1-[5-cyano-2-(4-fluorophenyl)-1H-imidazol-4-yl]-7,7-dihydroxynonyl}-6-methyl-6-azaspiro[2.5]octane-1-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H38 F N5 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-06-15
_chem_comp.pdbx_modified_date                   2020-08-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       511.631
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V1S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XEC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V1S  N4   N1   N  0  1  N  N  N  72.740  35.650  -2.382  -0.278   2.554   4.444  N4   V1S   1  
V1S  C27  C1   C  0  1  N  N  N  73.212  35.418  -1.366  -0.761   2.274   3.455  C27  V1S   2  
V1S  C26  C2   C  0  1  Y  N  N  73.787  35.076  -0.099  -1.371   1.921   2.209  C26  V1S   3  
V1S  N3   N2   N  0  1  Y  N  N  73.886  35.967   0.939  -2.601   2.342   1.740  N3   V1S   4  
V1S  C19  C3   C  0  1  Y  N  N  74.387  35.278   1.958  -2.778   1.765   0.520  C19  V1S   5  
V1S  C20  C4   C  0  1  Y  N  N  74.676  35.833   3.297  -3.960   1.939  -0.349  C20  V1S   6  
V1S  C25  C5   C  0  1  Y  N  N  74.902  34.990   4.378  -5.016   2.756   0.060  C25  V1S   7  
V1S  C24  C6   C  0  1  Y  N  N  75.162  35.505   5.635  -6.117   2.915  -0.754  C24  V1S   8  
V1S  C23  C7   C  0  1  Y  N  N  75.194  36.863   5.786  -6.177   2.265  -1.977  C23  V1S   9  
V1S  F    F1   F  0  1  N  N  N  75.435  37.375   7.027  -7.258   2.424  -2.772  F    V1S  10  
V1S  C22  C8   C  0  1  Y  N  N  74.990  37.730   4.753  -5.132   1.452  -2.388  C22  V1S  11  
V1S  C21  C9   C  0  1  Y  N  N  74.727  37.207   3.500  -4.024   1.291  -1.584  C21  V1S  12  
V1S  N2   N3   N  0  1  Y  N  N  74.617  33.973   1.599  -1.723   1.027   0.239  N2   V1S  13  
V1S  C18  C10  C  0  1  Y  N  N  74.241  33.829   0.287  -0.845   1.099   1.235  C18  V1S  14  
V1S  C8   C11  C  0  1  N  N  S  74.288  32.561  -0.509   0.490   0.401   1.292  C8   V1S  15  
V1S  C7   C12  C  0  1  N  N  N  73.181  31.600  -0.065   1.479   1.117   0.370  C7   V1S  16  
V1S  C6   C13  C  0  1  N  N  N  71.773  31.922  -0.556   2.865   0.487   0.521  C6   V1S  17  
V1S  C5   C14  C  0  1  N  N  N  70.736  30.890  -0.117   3.854   1.203  -0.401  C5   V1S  18  
V1S  C4   C15  C  0  1  N  N  N  69.308  31.054  -0.645   5.240   0.573  -0.250  C4   V1S  19  
V1S  C3   C16  C  0  1  N  N  N  68.361  30.085   0.067   6.229   1.289  -1.172  C3   V1S  20  
V1S  C2   C17  C  0  1  N  N  N  67.002  29.860  -0.598   7.615   0.659  -1.021  C2   V1S  21  
V1S  O1   O1   O  0  1  N  N  N  67.149  29.226  -1.853   8.050   0.785   0.334  O1   V1S  22  
V1S  O    O2   O  0  1  N  N  N  66.337  31.093  -0.750   7.550  -0.724  -1.374  O    V1S  23  
V1S  C1   C18  C  0  1  N  N  N  66.140  28.887   0.201   8.604   1.375  -1.943  C1   V1S  24  
V1S  C    C19  C  0  1  N  N  N  65.902  29.293   1.654   9.990   0.745  -1.792  C    V1S  25  
V1S  N    N4   N  0  1  N  N  N  75.596  31.963  -0.319   0.334  -0.988   0.855  N    V1S  26  
V1S  C9   C20  C  0  1  N  N  N  76.620  32.247  -1.130  -0.052  -1.932   1.737  C9   V1S  27  
V1S  O2   O3   O  0  1  N  N  N  76.521  33.008  -2.090  -0.269  -1.631   2.891  O2   V1S  28  
V1S  C10  C21  C  0  1  N  N  S  77.925  31.567  -0.763  -0.212  -3.362   1.288  C10  V1S  29  
V1S  C12  C22  C  0  1  N  N  N  79.086  32.422  -0.306  -1.591  -3.795   0.792  C12  V1S  30  
V1S  C11  C23  C  0  1  N  N  N  79.171  31.746  -1.626  -1.084  -4.279   2.148  C11  V1S  31  
V1S  C17  C24  C  0  1  N  N  N  78.963  33.946  -0.244  -2.707  -2.745   0.778  C17  V1S  32  
V1S  C16  C25  C  0  1  N  N  N  78.441  34.418   1.104  -2.759  -2.104  -0.613  C16  V1S  33  
V1S  N1   N5   N  0  1  N  N  N  79.298  33.929   2.232  -2.928  -3.152  -1.628  N1   V1S  34  
V1S  C15  C26  C  0  1  N  N  N  78.777  34.398   3.546  -3.200  -2.567  -2.948  C15  V1S  35  
V1S  C14  C27  C  0  1  N  N  N  79.424  32.434   2.196  -1.766  -4.047  -1.679  C14  V1S  36  
V1S  C13  C28  C  0  1  N  N  N  79.964  31.946   0.858  -1.651  -4.810  -0.354  C13  V1S  37  
V1S  H1   H1   H  0  1  N  N  N  73.633  36.935   0.930  -3.221   2.934   2.194  H1   V1S  38  
V1S  H2   H2   H  0  1  N  N  N  74.874  33.920   4.235  -4.971   3.262   1.013  H2   V1S  39  
V1S  H3   H3   H  0  1  N  N  N  75.335  34.850   6.476  -6.934   3.546  -0.439  H3   V1S  40  
V1S  H4   H4   H  0  1  N  N  N  75.033  38.798   4.910  -5.184   0.948  -3.342  H4   V1S  41  
V1S  H5   H5   H  0  1  N  N  N  74.559  37.875   2.668  -3.208   0.661  -1.907  H5   V1S  42  
V1S  H7   H7   H  0  1  N  N  N  74.140  32.799  -1.573   0.867   0.421   2.314  H7   V1S  43  
V1S  H8   H8   H  0  1  N  N  N  73.160  31.597   1.035   1.147   1.021  -0.664  H8   V1S  44  
V1S  H9   H9   H  0  1  N  N  N  73.442  30.596  -0.430   1.528   2.173   0.639  H9   V1S  45  
V1S  H10  H10  H  0  1  N  N  N  71.786  31.960  -1.655   3.197   0.584   1.554  H10  V1S  46  
V1S  H11  H11  H  0  1  N  N  N  71.479  32.905  -0.158   2.816  -0.568   0.252  H11  V1S  47  
V1S  H12  H12  H  0  1  N  N  N  70.687  30.919   0.981   3.522   1.107  -1.435  H12  V1S  48  
V1S  H13  H13  H  0  1  N  N  N  71.096  29.903  -0.442   3.903   2.259  -0.132  H13  V1S  49  
V1S  H14  H14  H  0  1  N  N  N  68.972  32.086  -0.466   5.572   0.669   0.784  H14  V1S  50  
V1S  H15  H15  H  0  1  N  N  N  69.295  30.846  -1.725   5.191  -0.482  -0.519  H15  V1S  51  
V1S  H16  H16  H  0  1  N  N  N  68.867  29.111   0.136   5.897   1.193  -2.206  H16  V1S  52  
V1S  H17  H17  H  0  1  N  N  N  68.179  30.476   1.079   6.278   2.344  -0.903  H17  V1S  53  
V1S  H18  H18  H  0  1  N  N  N  67.598  28.397  -1.739   8.117   1.699   0.642  H18  V1S  54  
V1S  H19  H19  H  0  1  N  N  N  66.244  31.510   0.099   7.261  -0.885  -2.283  H19  V1S  55  
V1S  H20  H20  H  0  1  N  N  N  65.163  28.806  -0.297   8.272   1.279  -2.977  H20  V1S  56  
V1S  H21  H21  H  0  1  N  N  N  66.636  27.905   0.196   8.653   2.430  -1.674  H21  V1S  57  
V1S  H22  H22  H  0  1  N  N  N  65.274  28.537   2.148  10.322   0.841  -0.758  H22  V1S  58  
V1S  H23  H23  H  0  1  N  N  N  66.867  29.367   2.177   9.941  -0.310  -2.061  H23  V1S  59  
V1S  H24  H24  H  0  1  N  N  N  65.393  30.268   1.684  10.695   1.255  -2.449  H24  V1S  60  
V1S  H25  H25  H  0  1  N  N  N  75.735  31.323   0.437   0.507  -1.229  -0.068  H25  V1S  61  
V1S  H26  H26  H  0  1  N  N  N  77.829  30.589  -0.268   0.659  -3.803   0.803  H26  V1S  62  
V1S  H27  H27  H  0  1  N  N  N  79.866  30.905  -1.769  -0.786  -5.325   2.231  H27  V1S  63  
V1S  H28  H28  H  0  1  N  N  N  79.118  32.339  -2.551  -1.541  -3.849   3.039  H28  V1S  64  
V1S  H29  H29  H  0  1  N  N  N  79.954  34.390  -0.417  -3.662  -3.223   0.996  H29  V1S  65  
V1S  H30  H30  H  0  1  N  N  N  78.270  34.279  -1.030  -2.499  -1.980   1.526  H30  V1S  66  
V1S  H31  H31  H  0  1  N  N  N  78.429  35.518   1.116  -3.599  -1.411  -0.663  H31  V1S  67  
V1S  H32  H32  H  0  1  N  N  N  77.418  34.038   1.243  -1.831  -1.564  -0.800  H32  V1S  68  
V1S  H34  H34  H  0  1  N  N  N  79.425  34.024   4.352  -2.367  -1.928  -3.241  H34  V1S  69  
V1S  H35  H35  H  0  1  N  N  N  78.766  35.498   3.565  -3.321  -3.365  -3.681  H35  V1S  70  
V1S  H36  H36  H  0  1  N  N  N  77.755  34.019   3.692  -4.114  -1.975  -2.902  H36  V1S  71  
V1S  H37  H37  H  0  1  N  N  N  78.432  31.989   2.364  -1.889  -4.756  -2.497  H37  V1S  72  
V1S  H38  H38  H  0  1  N  N  N  80.109  32.115   2.995  -0.861  -3.460  -1.839  H38  V1S  73  
V1S  H39  H39  H  0  1  N  N  N  79.989  30.846   0.861  -0.743  -5.413  -0.357  H39  V1S  74  
V1S  H40  H40  H  0  1  N  N  N  80.984  32.335   0.720  -2.521  -5.454  -0.227  H40  V1S  75  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V1S  N4   C27  TRIP  N  N   1  
V1S  O2   C9   DOUB  N  N   2  
V1S  O1   C2   SING  N  N   3  
V1S  C11  C10  SING  N  N   4  
V1S  C11  C12  SING  N  N   5  
V1S  C27  C26  SING  N  N   6  
V1S  C9   C10  SING  N  N   7  
V1S  C9   N    SING  N  N   8  
V1S  C10  C12  SING  N  N   9  
V1S  O    C2   SING  N  N  10  
V1S  C4   C5   SING  N  N  11  
V1S  C4   C3   SING  N  N  12  
V1S  C2   C3   SING  N  N  13  
V1S  C2   C1   SING  N  N  14  
V1S  C6   C5   SING  N  N  15  
V1S  C6   C7   SING  N  N  16  
V1S  C8   N    SING  N  N  17  
V1S  C8   C7   SING  N  N  18  
V1S  C8   C18  SING  N  N  19  
V1S  C12  C17  SING  N  N  20  
V1S  C12  C13  SING  N  N  21  
V1S  C17  C16  SING  N  N  22  
V1S  C26  C18  DOUB  Y  N  23  
V1S  C26  N3   SING  Y  N  24  
V1S  C1   C    SING  N  N  25  
V1S  C18  N2   SING  Y  N  26  
V1S  C13  C14  SING  N  N  27  
V1S  N3   C19  SING  Y  N  28  
V1S  C16  N1   SING  N  N  29  
V1S  N2   C19  DOUB  Y  N  30  
V1S  C19  C20  SING  N  N  31  
V1S  C14  N1   SING  N  N  32  
V1S  N1   C15  SING  N  N  33  
V1S  C20  C21  DOUB  Y  N  34  
V1S  C20  C25  SING  Y  N  35  
V1S  C21  C22  SING  Y  N  36  
V1S  C25  C24  DOUB  Y  N  37  
V1S  C22  C23  DOUB  Y  N  38  
V1S  C24  C23  SING  Y  N  39  
V1S  C23  F    SING  N  N  40  
V1S  N3   H1   SING  N  N  41  
V1S  C25  H2   SING  N  N  42  
V1S  C24  H3   SING  N  N  43  
V1S  C22  H4   SING  N  N  44  
V1S  C21  H5   SING  N  N  45  
V1S  C8   H7   SING  N  N  46  
V1S  C7   H8   SING  N  N  47  
V1S  C7   H9   SING  N  N  48  
V1S  C6   H10  SING  N  N  49  
V1S  C6   H11  SING  N  N  50  
V1S  C5   H12  SING  N  N  51  
V1S  C5   H13  SING  N  N  52  
V1S  C4   H14  SING  N  N  53  
V1S  C4   H15  SING  N  N  54  
V1S  C3   H16  SING  N  N  55  
V1S  C3   H17  SING  N  N  56  
V1S  O1   H18  SING  N  N  57  
V1S  O    H19  SING  N  N  58  
V1S  C1   H20  SING  N  N  59  
V1S  C1   H21  SING  N  N  60  
V1S  C    H22  SING  N  N  61  
V1S  C    H23  SING  N  N  62  
V1S  C    H24  SING  N  N  63  
V1S  N    H25  SING  N  N  64  
V1S  C10  H26  SING  N  N  65  
V1S  C11  H27  SING  N  N  66  
V1S  C11  H28  SING  N  N  67  
V1S  C17  H29  SING  N  N  68  
V1S  C17  H30  SING  N  N  69  
V1S  C16  H31  SING  N  N  70  
V1S  C16  H32  SING  N  N  71  
V1S  C15  H34  SING  N  N  72  
V1S  C15  H35  SING  N  N  73  
V1S  C15  H36  SING  N  N  74  
V1S  C14  H37  SING  N  N  75  
V1S  C14  H38  SING  N  N  76  
V1S  C13  H39  SING  N  N  77  
V1S  C13  H40  SING  N  N  78  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V1S  SMILES            ACDLabs               12.01  "N#Cc1c(nc(n1)c2ccc(cc2)F)C(NC(C4C3(CCN(C)CC3)C4)=O)CCCCCC(CC)(O)O"  
V1S  InChI             InChI                 1.03   "InChI=1S/C28H38FN5O3/c1-3-28(36,37)12-6-4-5-7-22(32-26(35)21-17-27(21)13-15-34(2)16-14-27)24-23(18-30)31-25(33-24)19-8-10-20(29)11-9-19/h8-11,21-22,36-37H,3-7,12-17H2,1-2H3,(H,31,33)(H,32,35)/t21-,22+/m1/s1"  
V1S  InChIKey          InChI                 1.03   HQQQLMWKYHVCDC-YADHBBJMSA-N  
V1S  SMILES_CANONICAL  CACTVS                3.385  "CCC(O)(O)CCCCC[C@H](NC(=O)[C@H]1CC12CCN(C)CC2)c3nc([nH]c3C#N)c4ccc(F)cc4"  
V1S  SMILES            CACTVS                3.385  "CCC(O)(O)CCCCC[CH](NC(=O)[CH]1CC12CCN(C)CC2)c3nc([nH]c3C#N)c4ccc(F)cc4"  
V1S  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCC(CCCCC[C@@H](c1c([nH]c(n1)c2ccc(cc2)F)C#N)NC(=O)[C@H]3CC34CCN(CC4)C)(O)O"  
V1S  SMILES            "OpenEye OEToolkits"  2.0.7  "CCC(CCCCCC(c1c([nH]c(n1)c2ccc(cc2)F)C#N)NC(=O)C3CC34CCN(CC4)C)(O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V1S  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S)-N-{(1S)-1-[5-cyano-2-(4-fluorophenyl)-1H-imidazol-4-yl]-7,7-dihydroxynonyl}-6-methyl-6-azaspiro[2.5]octane-1-carboxamide"  
V1S  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-~{N}-[(1~{S})-1-[5-cyano-2-(4-fluorophenyl)-1~{H}-imidazol-4-yl]-7,7-bis(oxidanyl)nonyl]-6-methyl-6-azaspiro[2.5]octane-2-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V1S  "Create component"  2020-06-15  RCSB  
V1S  "Initial release"   2020-08-12  RCSB  
##
