data_TKS
# 
_chem_comp.id                                    TKS 
_chem_comp.name                                  "2-(3-chlorophenyl)-2-methylpropyl [(2S)-3-cyclohexyl-1-({(1R,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-1-sulfanylpropan-2-yl}amino)-1-oxopropan-2-yl]carbamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H40 Cl N3 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-03-24 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        554.142 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     TKS 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6W5J 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
TKS C10 C1  C  0 1 N N N N N N -2.117 -5.048 -52.694 0.334  4.324  0.109  C10 TKS 1  
TKS C12 C2  C  0 1 N N N N N N -3.964 -3.411 -53.473 -0.702 4.871  -2.098 C12 TKS 2  
TKS C13 C3  C  0 1 N N N N N N -3.375 -2.334 -52.573 -0.713 3.385  -2.461 C13 TKS 3  
TKS C15 C4  C  0 1 N N N N N N 0.656  -4.175 -48.681 2.628  -0.047 0.750  C15 TKS 4  
TKS C11 C5  C  0 1 N N N N N N -3.102 -4.631 -53.773 -0.836 5.027  -0.582 C11 TKS 5  
TKS C14 C6  C  0 1 N N N N N N -2.494 -2.876 -51.454 0.458  2.683  -1.770 C14 TKS 6  
TKS C17 C7  C  0 1 N N S N N N 0.415  -4.518 -46.170 5.041  -0.366 0.873  C17 TKS 7  
TKS C18 C8  C  0 1 N N N N N N 0.997  -3.450 -45.266 6.062  -0.610 -0.239 C18 TKS 8  
TKS C20 C9  C  0 1 N N N N N N 2.939  -1.946 -44.913 6.489  -1.878 -2.351 C20 TKS 9  
TKS C22 C10 C  0 1 N N N N N N 4.647  -3.168 -46.051 5.683  -3.962 -1.720 C22 TKS 10 
TKS C23 C11 C  0 1 N N N N N N 3.280  -3.864 -46.240 5.313  -3.001 -0.568 C23 TKS 11 
TKS C25 C12 C  0 1 N N R N N N -0.835 -5.136 -45.520 5.661  0.528  1.949  C25 TKS 12 
TKS C29 C13 C  0 1 N N N N N N 6.594  -0.362 -51.438 -4.143 -2.353 1.106  C29 TKS 13 
TKS C01 C14 C  0 1 N N N N N N 5.419  -1.821 -53.076 -4.612 -0.119 2.120  C01 TKS 14 
TKS C02 C15 C  0 1 N N N N N N 5.232  -0.823 -51.932 -4.459 -0.887 0.806  C02 TKS 15 
TKS C03 C16 C  0 1 N N N N N N 4.459  -1.516 -50.807 -3.319 -0.276 -0.012 C03 TKS 16 
TKS C05 C17 C  0 1 N N N N N N 2.202  -2.147 -50.406 -0.975 0.136  0.161  C05 TKS 17 
TKS C07 C18 C  0 1 N N S N N N 0.135  -3.529 -49.973 1.411  0.630  0.175  C07 TKS 18 
TKS C08 C19 C  0 1 N N N N N N -0.759 -4.515 -50.695 1.494  2.136  0.436  C08 TKS 19 
TKS C09 C20 C  0 1 N N N N N N -1.468 -3.907 -51.914 0.323  2.838  -0.254 C09 TKS 20 
TKS C19 C21 C  0 1 N N S N N N 2.247  -2.813 -45.864 5.496  -1.620 -1.239 C19 TKS 21 
TKS C30 C22 C  0 1 Y N N N N N 4.406  0.385  -52.376 -5.743 -0.800 0.021  C30 TKS 22 
TKS C31 C23 C  0 1 Y N N N N N 3.831  1.197  -51.405 -6.917 -1.291 0.561  C31 TKS 23 
TKS C32 C24 C  0 1 Y N N N N N 3.075  2.297  -51.757 -8.095 -1.210 -0.160 C32 TKS 24 
TKS C34 C25 C  0 1 Y N N N N N 2.891  2.600  -53.100 -8.098 -0.638 -1.419 C34 TKS 25 
TKS C35 C26 C  0 1 Y N N N N N 3.466  1.795  -54.079 -6.923 -0.148 -1.958 C35 TKS 26 
TKS C36 C27 C  0 1 Y N N N N N 4.224  0.687  -53.719 -5.747 -0.224 -1.236 C36 TKS 27 
TKS N06 N1  N  0 1 N N N N N N 1.304  -3.213 -50.774 0.206  0.090  0.809  N06 TKS 28 
TKS N16 N2  N  0 1 N N N N N N -0.042 -3.926 -47.432 3.858  0.292  0.314  N16 TKS 29 
TKS N21 N3  N  0 1 N N N N N N 4.427  -2.162 -45.053 6.575  -3.196 -2.598 N21 TKS 30 
TKS O04 O1  O  0 1 N N N N N N 3.202  -1.814 -51.334 -2.082 -0.360 0.744  O04 TKS 31 
TKS O24 O2  O  0 1 N N N N N N 2.423  -1.172 -44.176 7.113  -1.019 -2.938 O24 TKS 32 
TKS O26 O3  O  0 1 N N N N N N -1.261 -6.228 -46.305 6.816  -0.114 2.494  O26 TKS 33 
TKS O27 O4  O  0 1 N N N N N N 1.625  -4.877 -48.717 2.502  -0.897 1.605  O27 TKS 34 
TKS O28 O5  O  0 1 N N N N N N 2.109  -1.578 -49.364 -1.040 0.626  -0.949 O28 TKS 35 
TKS CL3 CL1 CL 0 0 N N N N N N 2.339  3.311  -50.480 -9.570 -1.827 0.517  CL3 TKS 36 
TKS S1  S1  S  0 1 N Y N N N N -2.149 -3.886 -45.527 4.450  0.817  3.268  S1  TKS 37 
TKS H1  H1  H  0 1 N N N N N N -2.652 -5.687 -51.976 1.272  4.772  -0.221 H1  TKS 38 
TKS H2  H2  H  0 1 N N N N N N -1.315 -5.628 -53.174 0.238  4.435  1.189  H2  TKS 39 
TKS H3  H3  H  0 1 N N N N N N -4.210 -2.937 -54.435 0.236  5.319  -2.427 H3  TKS 40 
TKS H4  H4  H  0 1 N N N N N N -4.887 -3.770 -52.995 -1.536 5.372  -2.590 H4  TKS 41 
TKS H5  H5  H  0 1 N N N N N N -2.769 -1.658 -53.194 -1.651 2.938  -2.132 H5  TKS 42 
TKS H6  H6  H  0 1 N N N N N N -4.204 -1.771 -52.119 -0.617 3.274  -3.541 H6  TKS 43 
TKS H7  H7  H  0 1 N N N N N N -3.777 -5.480 -53.955 -1.774 4.579  -0.252 H7  TKS 44 
TKS H8  H8  H  0 1 N N N N N N -2.527 -4.417 -54.686 -0.829 6.086  -0.323 H8  TKS 45 
TKS H9  H9  H  0 1 N N N N N N -1.955 -2.032 -50.999 0.450  1.624  -2.029 H9  TKS 46 
TKS H10 H10 H  0 1 N N N N N N -3.143 -3.346 -50.700 1.395  3.130  -2.100 H10 TKS 47 
TKS H11 H11 H  0 1 N N N N N N 1.163  -5.303 -46.356 4.751  -1.319 1.316  H11 TKS 48 
TKS H12 H12 H  0 1 N N N N N N 0.240  -2.667 -45.109 6.273  0.329  -0.752 H12 TKS 49 
TKS H13 H13 H  0 1 N N N N N N 1.259  -3.907 -44.300 6.983  -1.003 0.192  H13 TKS 50 
TKS H14 H14 H  0 1 N N N N N N 5.403  -3.890 -45.709 6.199  -4.840 -1.332 H14 TKS 51 
TKS H15 H15 H  0 1 N N N N N N 4.979  -2.709 -46.994 4.786  -4.262 -2.263 H15 TKS 52 
TKS H16 H16 H  0 1 N N N N N N 3.148  -4.179 -47.286 4.279  -3.148 -0.254 H16 TKS 53 
TKS H17 H17 H  0 1 N N N N N N 3.198  -4.740 -45.580 5.995  -3.120 0.274  H17 TKS 54 
TKS H18 H18 H  0 1 N N N N N N -0.640 -5.410 -44.473 5.951  1.481  1.506  H18 TKS 55 
TKS H19 H19 H  0 1 N N N N N N 6.462  0.356  -50.615 -4.955 -2.788 1.689  H19 TKS 56 
TKS H20 H20 H  0 1 N N N N N N 7.167  -1.230 -51.079 -4.035 -2.901 0.170  H20 TKS 57 
TKS H21 H21 H  0 1 N N N N N N 7.139  0.121  -52.263 -3.215 -2.416 1.673  H21 TKS 58 
TKS H22 H22 H  0 1 N N N N N N 6.016  -2.675 -52.724 -3.683 -0.182 2.688  H22 TKS 59 
TKS H23 H23 H  0 1 N N N N N N 4.435  -2.176 -53.417 -4.837 0.926  1.906  H23 TKS 60 
TKS H24 H24 H  0 1 N N N N N N 5.940  -1.329 -53.910 -5.424 -0.553 2.703  H24 TKS 61 
TKS H25 H25 H  0 1 N N N N N N 4.974  -2.438 -50.501 -3.210 -0.824 -0.948 H25 TKS 62 
TKS H26 H26 H  0 1 N N N N N N 4.361  -0.846 -49.940 -3.544 0.768  -0.226 H26 TKS 63 
TKS H27 H27 H  0 1 N N N N N N -0.431 -2.618 -49.729 1.369  0.450  -0.899 H27 TKS 64 
TKS H28 H28 H  0 1 N N N N N N -1.523 -4.876 -49.990 1.447  2.321  1.509  H28 TKS 65 
TKS H29 H29 H  0 1 N N N N N N -0.144 -5.361 -51.034 2.433  2.522  0.041  H29 TKS 66 
TKS H30 H30 H  0 1 N N N N N N -0.721 -3.413 -52.553 -0.615 2.391  0.075  H30 TKS 67 
TKS H31 H31 H  0 1 N N N N N N 1.968  -2.242 -46.762 4.550  -1.265 -1.647 H31 TKS 68 
TKS H32 H32 H  0 1 N N N N N N 3.978  0.964  -50.361 -6.914 -1.737 1.544  H32 TKS 69 
TKS H33 H33 H  0 1 N N N N N N 2.302  3.460  -53.384 -9.017 -0.576 -1.982 H33 TKS 70 
TKS H34 H34 H  0 1 N N N N N N 3.323  2.032  -55.123 -6.926 0.302  -2.940 H34 TKS 71 
TKS H35 H35 H  0 1 N N N N N N 4.669  0.064  -54.480 -4.829 0.160  -1.656 H35 TKS 72 
TKS H36 H36 H  0 1 N N N N N N 1.490  -3.746 -51.599 0.258  -0.301 1.695  H36 TKS 73 
TKS H37 H37 H  0 1 N N N N N N -0.851 -3.339 -47.432 3.959  0.973  -0.370 H37 TKS 74 
TKS H38 H38 H  0 1 N N N N N N 5.138  -1.684 -44.537 7.154  -3.591 -3.269 H38 TKS 75 
TKS H39 H39 H  0 1 N N N N N N -2.033 -6.618 -45.913 7.507  -0.300 1.844  H39 TKS 76 
TKS H40 H40 H  0 1 N N N N N N -1.637 -2.952 -44.782 3.435  1.416  2.620  H40 TKS 77 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
TKS C35 C36 DOUB Y N 1  
TKS C35 C34 SING Y N 2  
TKS C11 C12 SING N N 3  
TKS C11 C10 SING N N 4  
TKS C36 C30 SING Y N 5  
TKS C12 C13 SING N N 6  
TKS C34 C32 DOUB Y N 7  
TKS C01 C02 SING N N 8  
TKS C10 C09 SING N N 9  
TKS C13 C14 SING N N 10 
TKS C30 C02 SING N N 11 
TKS C30 C31 DOUB Y N 12 
TKS C02 C29 SING N N 13 
TKS C02 C03 SING N N 14 
TKS C09 C14 SING N N 15 
TKS C09 C08 SING N N 16 
TKS C32 C31 SING Y N 17 
TKS C32 CL3 SING N N 18 
TKS O04 C03 SING N N 19 
TKS O04 C05 SING N N 20 
TKS N06 C05 SING N N 21 
TKS N06 C07 SING N N 22 
TKS C08 C07 SING N N 23 
TKS C05 O28 DOUB N N 24 
TKS C07 C15 SING N N 25 
TKS O27 C15 DOUB N N 26 
TKS C15 N16 SING N N 27 
TKS N16 C17 SING N N 28 
TKS O26 C25 SING N N 29 
TKS C23 C22 SING N N 30 
TKS C23 C19 SING N N 31 
TKS C17 C25 SING N N 32 
TKS C17 C18 SING N N 33 
TKS C22 N21 SING N N 34 
TKS C19 C18 SING N N 35 
TKS C19 C20 SING N N 36 
TKS N21 C20 SING N N 37 
TKS C20 O24 DOUB N N 38 
TKS C25 S1  SING N N 39 
TKS C10 H1  SING N N 40 
TKS C10 H2  SING N N 41 
TKS C12 H3  SING N N 42 
TKS C12 H4  SING N N 43 
TKS C13 H5  SING N N 44 
TKS C13 H6  SING N N 45 
TKS C11 H7  SING N N 46 
TKS C11 H8  SING N N 47 
TKS C14 H9  SING N N 48 
TKS C14 H10 SING N N 49 
TKS C17 H11 SING N N 50 
TKS C18 H12 SING N N 51 
TKS C18 H13 SING N N 52 
TKS C22 H14 SING N N 53 
TKS C22 H15 SING N N 54 
TKS C23 H16 SING N N 55 
TKS C23 H17 SING N N 56 
TKS C25 H18 SING N N 57 
TKS C29 H19 SING N N 58 
TKS C29 H20 SING N N 59 
TKS C29 H21 SING N N 60 
TKS C01 H22 SING N N 61 
TKS C01 H23 SING N N 62 
TKS C01 H24 SING N N 63 
TKS C03 H25 SING N N 64 
TKS C03 H26 SING N N 65 
TKS C07 H27 SING N N 66 
TKS C08 H28 SING N N 67 
TKS C08 H29 SING N N 68 
TKS C09 H30 SING N N 69 
TKS C19 H31 SING N N 70 
TKS C31 H32 SING N N 71 
TKS C34 H33 SING N N 72 
TKS C35 H34 SING N N 73 
TKS C36 H35 SING N N 74 
TKS N06 H36 SING N N 75 
TKS N16 H37 SING N N 76 
TKS N21 H38 SING N N 77 
TKS O26 H39 SING N N 78 
TKS S1  H40 SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
TKS SMILES           ACDLabs              12.01 "C1C(CCCC1)CC(C(NC(C(S)O)CC2C(=O)NCC2)=O)NC(=O)OCC(C)(C)c3cc(Cl)ccc3"                                                                                                                                                                                 
TKS InChI            InChI                1.03  "InChI=1S/C27H40ClN3O5S/c1-27(2,19-9-6-10-20(28)15-19)16-36-26(35)31-21(13-17-7-4-3-5-8-17)24(33)30-22(25(34)37)14-18-11-12-29-23(18)32/h6,9-10,15,17-18,21-22,25,34,37H,3-5,7-8,11-14,16H2,1-2H3,(H,29,32)(H,30,33)(H,31,35)/t18-,21-,22-,25+/m0/s1" 
TKS InChIKey         InChI                1.03  MEDRHFREPGGTSN-OPQSODGTSA-N                                                                                                                                                                                                                           
TKS SMILES_CANONICAL CACTVS               3.385 "CC(C)(COC(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@H](O)S)c3cccc(Cl)c3"                                                                                                                                                                  
TKS SMILES           CACTVS               3.385 "CC(C)(COC(=O)N[CH](CC1CCCCC1)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)S)c3cccc(Cl)c3"                                                                                                                                                                         
TKS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(COC(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@H](O)S)c3cccc(c3)Cl"                                                                                                                                                                  
TKS SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(COC(=O)NC(CC1CCCCC1)C(=O)NC(CC2CCNC2=O)C(O)S)c3cccc(c3)Cl"                                                                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
TKS "SYSTEMATIC NAME" ACDLabs              12.01 "2-(3-chlorophenyl)-2-methylpropyl [(2S)-3-cyclohexyl-1-({(1R,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-1-sulfanylpropan-2-yl}amino)-1-oxopropan-2-yl]carbamate"                                           
TKS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[2-(3-chlorophenyl)-2-methyl-propyl] ~{N}-[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(1~{R},2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-1-sulfanyl-propan-2-yl]amino]propan-2-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
TKS "Create component" 2020-03-24 RCSB 
TKS "Initial release"  2020-09-30 RCSB 
TKS "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            TKS 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C25 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
