data_SQS
#

_chem_comp.id                                   SQS
_chem_comp.name                                 "(2S,3R,4E)-2-aminooctadec-4-ene-1,3-diol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H37 N O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        D-Sphingosine
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2013-04-26
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       299.492
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SQS
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3VZB
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SQS  C4   C4   C  0  1  N  N  N  48.093  61.148   2.176    5.350  -0.917   0.515  C4   SQS   1  
SQS  C5   C5   C  0  1  N  N  N  49.013  62.107   2.277    4.362  -1.368  -0.217  C5   SQS   2  
SQS  C6   C6   C  0  1  N  N  N  48.571  63.509   2.621    3.047  -1.722   0.429  C6   SQS   3  
SQS  C7   C7   C  0  1  N  N  N  48.180  63.584   4.090    1.917  -0.953  -0.259  C7   SQS   4  
SQS  C8   C8   C  0  1  N  N  N  49.285  64.162   4.956    0.582  -1.312   0.396  C8   SQS   5  
SQS  C10  C10  C  0  1  N  N  N  49.843  64.033   7.412   -1.882  -0.903   0.364  C10  SQS   6  
SQS  C13  C13  C  0  1  N  N  N  50.736  64.153  10.940   -5.476   0.276  -0.357  C13  SQS   7  
SQS  C15  C15  C  0  1  N  N  N  52.187  62.455  12.239   -7.940   0.686  -0.389  C15  SQS   8  
SQS  C17  C17  C  0  1  N  N  N  53.127  60.314  11.244  -10.405   1.096  -0.422  C17  SQS   9  
SQS  O3   O3   O  0  1  N  N  N  47.248  58.936   1.701    6.545  -0.682  -1.551  O3   SQS  10  
SQS  C3   C3   C  0  1  N  N  R  48.458  59.715   1.840    6.663  -0.557  -0.132  C3   SQS  11  
SQS  C2   C2   C  0  1  N  N  S  49.346  59.638   0.582    7.028   0.885   0.224  C2   SQS  12  
SQS  N2   N2   N  0  1  N  N  N  49.547  58.246   0.209    7.149   1.014   1.683  N2   SQS  13  
SQS  C1   C1   C  0  1  N  N  N  48.810  60.412  -0.630    8.361   1.251  -0.432  C1   SQS  14  
SQS  O1   O1   O  0  1  N  N  N  49.906  60.899  -1.424    8.646   2.631  -0.197  O1   SQS  15  
SQS  C9   C9   C  0  1  N  N  N  48.789  64.393   6.378   -0.547  -0.543  -0.292  C9   SQS  16  
SQS  C11  C11  C  0  1  N  N  N  49.395  64.499   8.795   -3.011  -0.133  -0.324  C11  SQS  17  
SQS  C12  C12  C  0  1  N  N  N  49.771  63.540   9.923   -4.346  -0.493   0.331  C12  SQS  18  
SQS  C14  C14  C  0  1  N  N  N  50.893  63.280  12.191   -6.811  -0.083   0.299  C14  SQS  19  
SQS  C16  C16  C  0  1  N  N  N  51.954  60.966  11.973   -9.275   0.327   0.266  C16  SQS  20  
SQS  C18  C18  C  0  1  N  N  N  52.695  59.112  10.426  -11.740   0.737   0.234  C18  SQS  21  
SQS  H1   H1   H  0  1  N  N  N  47.055  61.399   2.339    5.223  -0.799   1.581  H1   SQS  22  
SQS  H2   H2   H  0  1  N  N  N  50.057  61.885   2.115    4.489  -1.487  -1.283  H2   SQS  23  
SQS  H3   H3   H  0  1  N  N  N  49.397  64.209   2.427    2.870  -2.793   0.329  H3   SQS  24  
SQS  H4   H4   H  0  1  N  N  N  47.706  63.781   1.999    3.077  -1.456   1.485  H4   SQS  25  
SQS  H5   H5   H  0  1  N  N  N  47.288  64.220   4.186    2.094   0.118  -0.160  H5   SQS  26  
SQS  H6   H6   H  0  1  N  N  N  47.947  62.569   4.446    1.887  -1.220  -1.316  H6   SQS  27  
SQS  H7   H7   H  0  1  N  N  N  50.131  63.460   4.978    0.406  -2.384   0.297  H7   SQS  28  
SQS  H8   H8   H  0  1  N  N  N  49.615  65.120   4.528    0.613  -1.046   1.452  H8   SQS  29  
SQS  H9   H9   H  0  1  N  N  N  49.985  62.942   7.423   -2.059  -1.974   0.264  H9   SQS  30  
SQS  H10  H10  H  0  1  N  N  N  50.792  64.524   7.151   -1.852  -0.636   1.420  H10  SQS  31  
SQS  H11  H11  H  0  1  N  N  N  51.721  64.272  10.466   -5.299   1.347  -0.258  H11  SQS  32  
SQS  H12  H12  H  0  1  N  N  N  50.353  65.139  11.242   -5.506   0.009  -1.413  H12  SQS  33  
SQS  H13  H13  H  0  1  N  N  N  52.638  62.567  13.236   -7.764   1.757  -0.290  H13  SQS  34  
SQS  H14  H14  H  0  1  N  N  N  52.879  62.843  11.478   -7.971   0.419  -1.446  H14  SQS  35  
SQS  H15  H15  H  0  1  N  N  N  53.870  59.988  11.987  -10.228   2.167  -0.323  H15  SQS  36  
SQS  H16  H16  H  0  1  N  N  N  53.582  61.055  10.571  -10.435   0.829  -1.478  H16  SQS  37  
SQS  H17  H17  H  0  1  N  N  N  46.731  59.010   2.494    5.869  -0.112  -1.941  H17  SQS  38  
SQS  H18  H18  H  0  1  N  N  N  49.041  59.312   2.681    7.442  -1.229   0.229  H18  SQS  39  
SQS  H19  H19  H  0  1  N  N  N  50.323  60.072   0.844    6.249   1.557  -0.137  H19  SQS  40  
SQS  H20  H20  H  0  1  N  N  N  49.896  57.737   0.996    7.865   0.401   2.042  H20  SQS  41  
SQS  H21  H21  H  0  1  N  N  N  48.677  57.851  -0.084    7.326   1.971   1.948  H21  SQS  42  
SQS  H23  H23  H  0  1  N  N  N  48.206  61.263  -0.281    9.156   0.638  -0.006  H23  SQS  43  
SQS  H24  H24  H  0  1  N  N  N  48.185  59.745  -1.242    8.299   1.070  -1.505  H24  SQS  44  
SQS  H25  H25  H  0  1  N  N  N  49.568  61.377  -2.172    9.478   2.933  -0.585  H25  SQS  45  
SQS  H26  H26  H  0  1  N  N  N  48.525  65.454   6.494   -0.370   0.528  -0.193  H26  SQS  46  
SQS  H27  H27  H  0  1  N  N  N  47.897  63.772   6.549   -0.577  -0.810  -1.348  H27  SQS  47  
SQS  H28  H28  H  0  1  N  N  N  49.861  65.474   9.000   -2.835   0.938  -0.225  H28  SQS  48  
SQS  H29  H29  H  0  1  N  N  N  48.301  64.610   8.785   -3.042  -0.400  -1.381  H29  SQS  49  
SQS  H30  H30  H  0  1  N  N  N  48.852  63.242  10.449   -4.316  -0.226   1.388  H30  SQS  50  
SQS  H31  H31  H  0  1  N  N  N  50.246  62.651   9.482   -4.523  -1.564   0.232  H31  SQS  51  
SQS  H32  H32  H  0  1  N  N  N  50.873  63.938  13.073   -6.988  -1.154   0.199  H32  SQS  52  
SQS  H33  H33  H  0  1  N  N  N  50.042  62.585  12.233   -6.780   0.184   1.355  H33  SQS  53  
SQS  H34  H34  H  0  1  N  N  N  51.049  60.855  11.357   -9.452  -0.744   0.167  H34  SQS  54  
SQS  H35  H35  H  0  1  N  N  N  51.808  60.454  12.935   -9.245   0.594   1.322  H35  SQS  55  
SQS  H36  H36  H  0  1  N  N  N  53.570  58.678   9.921  -11.917  -0.334   0.134  H36  SQS  56  
SQS  H37  H37  H  0  1  N  N  N  52.244  58.360  11.090  -11.709   1.003   1.290  H37  SQS  57  
SQS  H38  H38  H  0  1  N  N  N  51.957  59.427   9.674  -12.544   1.285  -0.257  H38  SQS  58  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SQS  O1   C1   SING  N  N   1  
SQS  C1   C2   SING  N  N   2  
SQS  N2   C2   SING  N  N   3  
SQS  C2   C3   SING  N  N   4  
SQS  O3   C3   SING  N  N   5  
SQS  C3   C4   SING  N  N   6  
SQS  C4   C5   DOUB  N  E   7  
SQS  C5   C6   SING  N  N   8  
SQS  C6   C7   SING  N  N   9  
SQS  C7   C8   SING  N  N  10  
SQS  C8   C9   SING  N  N  11  
SQS  C9   C10  SING  N  N  12  
SQS  C10  C11  SING  N  N  13  
SQS  C11  C12  SING  N  N  14  
SQS  C12  C13  SING  N  N  15  
SQS  C18  C17  SING  N  N  16  
SQS  C13  C14  SING  N  N  17  
SQS  C17  C16  SING  N  N  18  
SQS  C16  C15  SING  N  N  19  
SQS  C14  C15  SING  N  N  20  
SQS  C4   H1   SING  N  N  21  
SQS  C5   H2   SING  N  N  22  
SQS  C6   H3   SING  N  N  23  
SQS  C6   H4   SING  N  N  24  
SQS  C7   H5   SING  N  N  25  
SQS  C7   H6   SING  N  N  26  
SQS  C8   H7   SING  N  N  27  
SQS  C8   H8   SING  N  N  28  
SQS  C10  H9   SING  N  N  29  
SQS  C10  H10  SING  N  N  30  
SQS  C13  H11  SING  N  N  31  
SQS  C13  H12  SING  N  N  32  
SQS  C15  H13  SING  N  N  33  
SQS  C15  H14  SING  N  N  34  
SQS  C17  H15  SING  N  N  35  
SQS  C17  H16  SING  N  N  36  
SQS  O3   H17  SING  N  N  37  
SQS  C3   H18  SING  N  N  38  
SQS  C2   H19  SING  N  N  39  
SQS  N2   H20  SING  N  N  40  
SQS  N2   H21  SING  N  N  41  
SQS  C1   H23  SING  N  N  42  
SQS  C1   H24  SING  N  N  43  
SQS  O1   H25  SING  N  N  44  
SQS  C9   H26  SING  N  N  45  
SQS  C9   H27  SING  N  N  46  
SQS  C11  H28  SING  N  N  47  
SQS  C11  H29  SING  N  N  48  
SQS  C12  H30  SING  N  N  49  
SQS  C12  H31  SING  N  N  50  
SQS  C14  H32  SING  N  N  51  
SQS  C14  H33  SING  N  N  52  
SQS  C16  H34  SING  N  N  53  
SQS  C16  H35  SING  N  N  54  
SQS  C18  H36  SING  N  N  55  
SQS  C18  H37  SING  N  N  56  
SQS  C18  H38  SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SQS  SMILES            ACDLabs               12.01  "OCC(N)C(O)/C=C/CCCCCCCCCCCCC"  
SQS  InChI             InChI                 1.03   "InChI=1S/C18H37NO2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(21)17(19)16-20/h14-15,17-18,20-21H,2-13,16,19H2,1H3/b15-14+/t17-,18+/m0/s1"  
SQS  InChIKey          InChI                 1.03   WWUZIQQURGPMPG-KRWOKUGFSA-N  
SQS  SMILES_CANONICAL  CACTVS                3.370  "CCCCCCCCCCCCC/C=C/[C@@H](O)[C@@H](N)CO"  
SQS  SMILES            CACTVS                3.370  "CCCCCCCCCCCCCC=C[CH](O)[CH](N)CO"  
SQS  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CCCCCCCCCCCCC/C=C/[C@H]([C@H](CO)N)O"  
SQS  SMILES            "OpenEye OEToolkits"  1.7.6  "CCCCCCCCCCCCCC=CC(C(CO)N)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SQS  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2S,3R,4E)-2-aminooctadec-4-ene-1,3-diol"  
SQS  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(E,2S,3R)-2-azanyloctadec-4-ene-1,3-diol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SQS  "Create component"  2013-04-26  PDBJ  
SQS  "Initial release"   2013-05-08  RCSB  
SQS  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     SQS
_pdbx_chem_comp_synonyms.name        D-Sphingosine
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
