data_N6S
#

_chem_comp.id                                   N6S
_chem_comp.name                                 "(2S)-N6-(1-Methyl-2-phenylethyl)adenosine-3',5'-cyclic monophosphate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H22 N5 O6 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;(2S,4aS,6R,7R,7aR)-6-(6-{[(1S)-1-methyl-2-phenylethyl]amino}-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphi
nine-2,7-diol 2-oxide
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-07-08
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       447.382
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    N6S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3I59
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N6S  C5H   C5H   C  0  1  Y  N  N   -2.207  28.689  -34.100   6.168   1.892   0.910  C5H   N6S   1  
N6S  C5F   C5F   C  0  1  Y  N  N   -1.184  29.455  -33.177   5.750   3.046   1.544  C5F   N6S   2  
N6S  C5E   C5E   C  0  1  Y  N  N   -1.141  29.148  -31.650   4.745   3.815   0.988  C5E   N6S   3  
N6S  C5G   C5G   C  0  1  Y  N  N   -2.137  28.041  -31.003   4.158   3.430  -0.203  C5G   N6S   4  
N6S  C5I   C5I   C  0  1  Y  N  N   -3.164  27.277  -31.920   4.577   2.275  -0.837  C5I   N6S   5  
N6S  C5U   C5U   C  0  1  Y  N  N   -3.205  27.584  -33.449   5.581   1.506  -0.281  C5U   N6S   6  
N6S  C5M   C5M   C  0  1  N  N  N   -4.212  26.818  -34.361   6.037   0.247  -0.972  C5M   N6S   7  
N6S  C5Y   C5Y   C  0  1  N  N  S   -4.751  25.553  -33.604   5.206  -0.938  -0.475  C5Y   N6S   8  
N6S  C5A   C5A   C  0  1  N  N  N   -3.675  24.458  -33.438   5.750  -2.233  -1.082  C5A   N6S   9  
N6S  N6    N6    N  0  1  N  N  N   -5.854  25.001  -34.400   3.809  -0.758  -0.878  N6    N6S  10  
N6S  C6    C6    C  0  1  Y  N  N   -5.607  24.332  -35.684   2.797  -1.365  -0.156  C6    N6S  11  
N6S  N1    N1    N  0  1  Y  N  N   -4.338  24.416  -36.369   3.074  -2.114   0.906  N1    N6S  12  
N6S  C2    C2    C  0  1  Y  N  N   -4.120  23.752  -37.789   2.115  -2.698   1.601  C2    N6S  13  
N6S  N3    N3    N  0  1  Y  N  N   -5.279  23.012  -38.430   0.842  -2.575   1.289  N3    N6S  14  
N6S  C4    C4    C  0  1  Y  N  N   -6.595  22.926  -37.722   0.468  -1.845   0.243  C4    N6S  15  
N6S  C5    C5    C  0  1  Y  N  N   -6.801  23.571  -36.348   1.451  -1.199  -0.525  C5    N6S  16  
N6S  N7    N7    N  0  1  Y  N  N   -8.193  23.332  -35.879   0.810  -0.533  -1.515  N7    N6S  17  
N6S  C8    C8    C  0  1  Y  N  N   -8.891  22.501  -36.992  -0.473  -0.724  -1.407  C8    N6S  18  
N6S  N9    N9    N  0  1  Y  N  N   -7.914  22.262  -38.093  -0.735  -1.524  -0.334  N9    N6S  19  
N6S  C1S   C1S   C  0  1  N  N  R   -8.157  21.557  -39.372  -2.058  -1.962   0.118  C1S   N6S  20  
N6S  O4S   O4S   O  0  1  N  N  N   -9.318  22.200  -39.993  -3.002  -1.891  -0.978  O4S   N6S  21  
N6S  C4S   C4S   C  0  1  N  N  S  -10.413  21.461  -39.348  -3.603  -0.603  -0.880  C4S   N6S  22  
N6S  C5S   C5S   C  0  1  N  N  N  -11.815  21.716  -39.995  -4.908  -0.404  -1.626  C5S   N6S  23  
N6S  O5S   O5S   O  0  1  N  N  N  -12.628  20.517  -40.048  -5.284   0.982  -1.444  O5S   N6S  24  
N6S  P5    P5    P  0  1  N  N  S  -12.236  19.257  -38.947  -5.297   1.638   0.040  P5    N6S  25  
N6S  O5D   O5D   O  0  1  N  N  N  -12.690  19.856  -37.480  -5.055   3.227  -0.058  O5D   N6S  26  
N6S  O5B   O5B   O  0  1  N  N  N  -12.903  18.026  -39.307  -6.591   1.362   0.704  O5B   N6S  27  
N6S  O3S   O3S   O  0  1  N  N  N  -10.730  19.063  -38.758  -4.082   0.940   0.877  O3S   N6S  28  
N6S  C3S   C3S   C  0  1  N  N  R   -9.952  19.984  -39.530  -3.883  -0.464   0.641  C3S   N6S  29  
N6S  C2S   C2S   C  0  1  N  N  R   -8.494  20.051  -39.138  -2.576  -1.013   1.228  C2S   N6S  30  
N6S  O2S   O2S   O  0  1  N  N  N   -7.774  19.267  -40.064  -2.831  -1.739   2.433  O2S   N6S  31  
N6S  H5H   H5H   H  0  1  N  N  N   -2.244  28.897  -35.159   6.957   1.293   1.342  H5H   N6S  32  
N6S  H5F   H5F   H  0  1  N  N  N   -0.516  30.190  -33.601   6.208   3.348   2.475  H5F   N6S  33  
N6S  H5E   H5E   H  0  1  N  N  N   -0.443  29.676  -31.017   4.417   4.717   1.485  H5E   N6S  34  
N6S  H5G   H5G   H  0  1  N  N  N   -2.095  27.829  -29.945   3.372   4.030  -0.637  H5G   N6S  35  
N6S  H5I   H5I   H  0  1  N  N  N   -3.835  26.546  -31.494   4.119   1.974  -1.768  H5I   N6S  36  
N6S  H5M   H5M   H  0  1  N  N  N   -5.054  27.480  -34.613   5.906   0.356  -2.049  H5M   N6S  37  
N6S  H5MA  H5MA  H  0  0  N  N  N   -3.702  26.502  -35.283   7.090   0.071  -0.750  H5MA  N6S  38  
N6S  H5Y   H5Y   H  0  1  N  N  N   -5.068  25.860  -32.596   5.266  -0.993   0.612  H5Y   N6S  39  
N6S  H5A   H5A   H  0  1  N  N  N   -3.419  24.042  -34.424   5.690  -2.178  -2.168  H5A   N6S  40  
N6S  H5AA  H5AA  H  0  0  N  N  N   -2.775  24.895  -32.980   6.789  -2.366  -0.781  H5AA  N6S  41  
N6S  H5AB  H5AB  H  0  0  N  N  N   -4.064  23.657  -32.792   5.158  -3.076  -0.727  H5AB  N6S  42  
N6S  HN6   HN6   H  0  1  N  N  N   -6.292  24.316  -33.818   3.594  -0.213  -1.651  HN6   N6S  43  
N6S  H2    H2    H  0  1  N  N  N   -3.166  23.824  -38.291   2.384  -3.298   2.457  H2    N6S  44  
N6S  H8    H8    H  0  1  N  N  N   -9.914  22.154  -36.971  -1.219  -0.308  -2.067  H8    N6S  45  
N6S  H1S   H1S   H  0  1  N  N  N   -7.256  21.610  -40.001  -2.001  -2.981   0.498  H1S   N6S  46  
N6S  H4S   H4S   H  0  1  N  N  N  -10.569  21.766  -38.303  -2.886   0.158  -1.190  H4S   N6S  47  
N6S  H5S   H5S   H  0  1  N  N  N  -12.344  22.470  -39.394  -4.768  -0.617  -2.685  H5S   N6S  48  
N6S  H5SA  H5SA  H  0  0  N  N  N  -11.651  22.057  -41.028  -5.676  -1.058  -1.213  H5SA  N6S  49  
N6S  HO5D  HO5D  H  0  0  N  N  N  -12.777  19.142  -36.859  -5.723   3.695  -0.578  HO5D  N6S  50  
N6S  H3S   H3S   H  0  1  N  N  N  -10.092  19.595  -40.550  -4.746  -1.057   0.943  H3S   N6S  51  
N6S  H2S   H2S   H  0  1  N  N  N   -8.266  19.702  -38.120  -1.866  -0.206   1.407  H2S   N6S  52  
N6S  HO2S  HO2S  H  0  0  N  N  N   -7.612  19.774  -40.851  -2.049  -2.167   2.806  HO2S  N6S  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N6S  C5H  C5U   DOUB  Y  N   1  
N6S  C5H  C5F   SING  Y  N   2  
N6S  C5H  H5H   SING  N  N   3  
N6S  C5F  C5E   DOUB  Y  N   4  
N6S  C5F  H5F   SING  N  N   5  
N6S  C5E  C5G   SING  Y  N   6  
N6S  C5E  H5E   SING  N  N   7  
N6S  C5I  C5G   DOUB  Y  N   8  
N6S  C5G  H5G   SING  N  N   9  
N6S  C5U  C5I   SING  Y  N  10  
N6S  C5I  H5I   SING  N  N  11  
N6S  C5M  C5U   SING  N  N  12  
N6S  C5M  C5Y   SING  N  N  13  
N6S  C5M  H5M   SING  N  N  14  
N6S  C5M  H5MA  SING  N  N  15  
N6S  N6   C5Y   SING  N  N  16  
N6S  C5Y  C5A   SING  N  N  17  
N6S  C5Y  H5Y   SING  N  N  18  
N6S  C5A  H5A   SING  N  N  19  
N6S  C5A  H5AA  SING  N  N  20  
N6S  C5A  H5AB  SING  N  N  21  
N6S  C6   N6    SING  N  N  22  
N6S  N6   HN6   SING  N  N  23  
N6S  N1   C6    DOUB  Y  N  24  
N6S  C5   C6    SING  Y  N  25  
N6S  C2   N1    SING  Y  N  26  
N6S  N3   C2    DOUB  Y  N  27  
N6S  C2   H2    SING  N  N  28  
N6S  N3   C4    SING  Y  N  29  
N6S  N9   C4    SING  Y  N  30  
N6S  C4   C5    DOUB  Y  N  31  
N6S  C5   N7    SING  Y  N  32  
N6S  C8   N7    DOUB  Y  N  33  
N6S  N9   C8    SING  Y  N  34  
N6S  C8   H8    SING  N  N  35  
N6S  C1S  N9    SING  N  N  36  
N6S  O4S  C1S   SING  N  N  37  
N6S  C1S  C2S   SING  N  N  38  
N6S  C1S  H1S   SING  N  N  39  
N6S  O4S  C4S   SING  N  N  40  
N6S  C5S  C4S   SING  N  N  41  
N6S  C3S  C4S   SING  N  N  42  
N6S  C4S  H4S   SING  N  N  43  
N6S  O5S  C5S   SING  N  N  44  
N6S  C5S  H5S   SING  N  N  45  
N6S  C5S  H5SA  SING  N  N  46  
N6S  O5S  P5    SING  N  N  47  
N6S  O5B  P5    DOUB  N  N  48  
N6S  P5   O3S   SING  N  N  49  
N6S  P5   O5D   SING  N  N  50  
N6S  O5D  HO5D  SING  N  N  51  
N6S  C3S  O3S   SING  N  N  52  
N6S  C3S  C2S   SING  N  N  53  
N6S  C3S  H3S   SING  N  N  54  
N6S  O2S  C2S   SING  N  N  55  
N6S  C2S  H2S   SING  N  N  56  
N6S  O2S  HO2S  SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N6S  SMILES            ACDLabs               10.04  "O=P4(OCC5OC(n2c3ncnc(NC(C)Cc1ccccc1)c3nc2)C(O)C5O4)O"  
N6S  SMILES_CANONICAL  CACTVS                3.341  "C[C@@H](Cc1ccccc1)Nc2ncnc3n(cnc23)[C@@H]4O[C@H]5CO[P@@](O)(=O)O[C@@H]5[C@H]4O"  
N6S  SMILES            CACTVS                3.341  "C[CH](Cc1ccccc1)Nc2ncnc3n(cnc23)[CH]4O[CH]5CO[P](O)(=O)O[CH]5[CH]4O"  
N6S  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@@H](Cc1ccccc1)Nc2c3c(ncn2)n(cn3)[C@H]4[C@@H]([C@@H]5[C@@H](O4)CO[P@@](=O)(O5)O)O"  
N6S  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(Cc1ccccc1)Nc2c3c(ncn2)n(cn3)C4C(C5C(O4)COP(=O)(O5)O)O"  
N6S  InChI             InChI                 1.03   "InChI=1S/C19H22N5O6P/c1-11(7-12-5-3-2-4-6-12)23-17-14-18(21-9-20-17)24(10-22-14)19-15(25)16-13(29-19)8-28-31(26,27)30-16/h2-6,9-11,13,15-16,19,25H,7-8H2,1H3,(H,26,27)(H,20,21,23)/t11-,13-,15+,16-,19+/m0/s1"  
N6S  InChIKey          InChI                 1.03   MKYZONTUKKUGCB-IQAYWSRLSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N6S  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2S,4aS,6R,7R,7aR)-6-(6-{[(1S)-1-methyl-2-phenylethyl]amino}-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide"  
N6S  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(1S,4S,6R,7R,8R)-4-hydroxy-4-oxo-8-[6-[[(2S)-1-phenylpropan-2-yl]amino]purin-9-yl]-3,5,9-trioxa-4$l^{5}-phosphabicyclo[4.3.0]nonan-7-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N6S  "Create component"      2009-07-08  RCSB  
N6S  "Modify aromatic_flag"  2011-06-04  RCSB  
N6S  "Modify descriptor"     2011-06-04  RCSB  
N6S  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     N6S
_pdbx_chem_comp_synonyms.name        "(2S,4aS,6R,7R,7aR)-6-(6-{[(1S)-1-methyl-2-phenylethyl]amino}-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
