data_LRS
#

_chem_comp.id                                   LRS
_chem_comp.name                                 "N-{5-[4-(hydroxymethyl)piperidin-1-yl]-1-methyl-2-(morpholin-4-yl)-1H-benzimidazol-6-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H30 N8 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-13
_chem_comp.pdbx_modified_date                   2019-05-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       490.558
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LRS
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6O94
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LRS  C4   C1   C  0  1  Y  N  N  12.872  43.042  57.026  -0.169  -1.397   0.212  C4   LRS   1  
LRS  C14  C2   C  0  1  N  N  N  13.599  38.949  55.977   1.526  -5.244  -0.021  C14  LRS   2  
LRS  C5   C3   C  0  1  Y  N  N  11.954  43.046  58.076  -1.525  -1.619   0.068  C5   LRS   3  
LRS  C6   C4   C  0  1  Y  N  N  11.446  44.250  58.548  -2.412  -0.539   0.090  C6   LRS   4  
LRS  C11  C5   C  0  1  N  N  N   8.594  45.631  61.243  -6.256   0.670   1.038  C11  LRS   5  
LRS  C7   C6   C  0  1  Y  N  N  10.221  45.763  59.447  -4.123   0.815   0.063  C7   LRS   6  
LRS  C8   C7   C  0  1  N  N  N   8.195  47.004  59.244  -5.996   1.022  -1.341  C8   LRS   7  
LRS  C9   C8   C  0  1  N  N  N   7.208  47.800  60.054  -7.413   1.599  -1.398  C9   LRS   8  
LRS  C10  C9   C  0  1  N  N  N   7.562  46.478  61.942  -7.670   1.251   0.958  C10  LRS   9  
LRS  C12  C10  C  0  1  N  N  N  14.105  40.981  57.391   0.421  -3.423   1.281  C12  LRS  10  
LRS  C13  C11  C  0  1  N  N  N  14.688  39.756  56.677   1.495  -4.512   1.324  C13  LRS  11  
LRS  N1   N1   N  0  1  Y  N  N  10.407  44.473  59.454  -3.764  -0.441  -0.024  N1   LRS  12  
LRS  N2   N2   N  0  1  N  N  N   9.195  46.392  60.132  -5.422   1.274  -0.011  N2   LRS  13  
LRS  C3   C12  C  0  1  Y  N  N  13.311  44.258  56.463   0.319  -0.098   0.379  C3   LRS  14  
LRS  N3   N3   N  0  1  N  N  N  13.323  41.821  56.472   0.720  -2.480   0.196  N3   LRS  15  
LRS  O2   O1   O  0  1  N  N  N  14.573  46.416  54.858   1.514   2.212  -0.196  O2   LRS  16  
LRS  C18  C13  C  0  1  N  N  N  14.751  45.212  54.631   2.234   1.304   0.176  C18  LRS  17  
LRS  C19  C14  C  0  1  Y  N  N  15.493  44.782  53.415   3.685   1.500   0.246  C19  LRS  18  
LRS  C21  C15  C  0  1  Y  N  N  15.928  43.507  53.041   4.389   2.675  -0.083  C21  LRS  19  
LRS  N7   N4   N  0  1  Y  N  N  15.806  42.314  53.646   3.991   3.870  -0.521  N7   LRS  20  
LRS  C22  C16  C  0  1  Y  N  N  16.346  41.250  53.023   4.863   4.825  -0.760  C22  LRS  21  
LRS  C23  C17  C  0  1  Y  N  N  16.985  41.311  51.788   6.229   4.596  -0.555  C23  LRS  22  
LRS  C24  C18  C  0  1  Y  N  N  17.062  42.542  51.172   6.641   3.382  -0.109  C24  LRS  23  
LRS  N6   N5   N  0  1  Y  N  N  16.526  43.664  51.802   5.712   2.412   0.129  N6   LRS  24  
LRS  N5   N6   N  0  1  Y  N  N  16.478  44.947  51.338   5.827   1.094   0.583  N5   LRS  25  
LRS  C20  C19  C  0  1  Y  N  N  15.860  45.607  52.341   4.639   0.554   0.660  C20  LRS  26  
LRS  N4   N7   N  0  1  N  N  N  14.259  44.201  55.404   1.697   0.118   0.524  N4   LRS  27  
LRS  C2   C20  C  0  1  Y  N  N  12.814  45.476  56.942  -0.553   0.977   0.402  C2   LRS  28  
LRS  C16  C21  C  0  1  N  N  N  12.284  41.093  55.731   0.709  -3.151  -1.110  C16  LRS  29  
LRS  C15  C22  C  0  1  N  N  N  12.851  39.863  55.011   1.792  -4.232  -1.138  C15  LRS  30  
LRS  C17  C23  C  0  1  N  N  N  14.140  37.709  55.291   2.638  -6.295  -0.005  C17  LRS  31  
LRS  O1   O2   O  0  1  N  N  N  15.113  38.037  54.313   2.592  -7.056  -1.214  O1   LRS  32  
LRS  C1   C24  C  0  1  Y  N  N  11.892  45.449  57.988  -1.916   0.763   0.258  C1   LRS  33  
LRS  N    N8   N  0  1  Y  N  N  11.133  46.451  58.591  -3.021   1.602   0.238  N    LRS  34  
LRS  C    C25  C  0  1  N  N  N  11.381  47.882  58.454  -3.008   3.060   0.377  C    LRS  35  
LRS  O    O3   O  0  1  N  N  N   6.588  46.980  61.031  -8.199   1.024  -0.352  O    LRS  36  
LRS  H1   H1   H  0  1  N  N  N  12.883  38.621  56.745   0.567  -5.732  -0.192  H1   LRS  37  
LRS  H2   H2   H  0  1  N  N  N  11.638  42.114  58.522  -1.898  -2.624  -0.061  H2   LRS  38  
LRS  H3   H3   H  0  1  N  N  N   8.114  44.724  60.847  -5.827   0.891   2.016  H3   LRS  39  
LRS  H4   H4   H  0  1  N  N  N   9.380  45.348  61.959  -6.297  -0.410   0.895  H4   LRS  40  
LRS  H5   H5   H  0  1  N  N  N   7.663  46.213  58.695  -6.033  -0.052  -1.524  H5   LRS  41  
LRS  H6   H6   H  0  1  N  N  N   8.701  47.670  58.529  -5.377   1.500  -2.101  H6   LRS  42  
LRS  H7   H7   H  0  1  N  N  N   7.734  48.625  60.556  -7.370   2.681  -1.269  H7   LRS  43  
LRS  H8   H8   H  0  1  N  N  N   6.438  48.210  59.384  -7.863   1.365  -2.363  H8   LRS  44  
LRS  H9   H9   H  0  1  N  N  N   8.067  47.326  62.428  -8.306   0.764   1.697  H9   LRS  45  
LRS  H10  H10  H  0  1  N  N  N   7.056  45.867  62.704  -7.635   2.322   1.156  H10  LRS  46  
LRS  H11  H11  H  0  1  N  N  N  14.930  41.578  57.806  -0.553  -3.881   1.106  H11  LRS  47  
LRS  H12  H12  H  0  1  N  N  N  13.451  40.641  58.208   0.406  -2.890   2.232  H12  LRS  48  
LRS  H13  H13  H  0  1  N  N  N  15.189  39.115  57.417   1.264  -5.221   2.119  H13  LRS  49  
LRS  H14  H14  H  0  1  N  N  N  15.421  40.093  55.929   2.467  -4.057   1.512  H14  LRS  50  
LRS  H15  H15  H  0  1  N  N  N  16.279  40.289  53.512   4.525   5.788  -1.114  H15  LRS  51  
LRS  H16  H16  H  0  1  N  N  N  17.405  40.428  51.330   6.948   5.378  -0.751  H16  LRS  52  
LRS  H17  H17  H  0  1  N  N  N  17.535  42.637  50.206   7.690   3.187   0.055  H17  LRS  53  
LRS  H18  H18  H  0  1  N  N  N  15.667  46.669  52.319   4.426  -0.455   0.981  H18  LRS  54  
LRS  H19  H19  H  0  1  N  N  N  14.616  43.290  55.196   2.264  -0.587   0.875  H19  LRS  55  
LRS  H20  H20  H  0  1  N  N  N  13.136  46.413  56.512  -0.173   1.979   0.532  H20  LRS  56  
LRS  H21  H21  H  0  1  N  N  N  11.840  41.768  54.985  -0.266  -3.610  -1.273  H21  LRS  57  
LRS  H22  H22  H  0  1  N  N  N  11.507  40.765  56.437   0.903  -2.421  -1.895  H22  LRS  58  
LRS  H23  H23  H  0  1  N  N  N  12.022  39.301  54.556   2.769  -3.773  -0.988  H23  LRS  59  
LRS  H24  H24  H  0  1  N  N  N  13.544  40.196  54.224   1.773  -4.741  -2.102  H24  LRS  60  
LRS  H25  H25  H  0  1  N  N  N  13.308  37.179  54.804   3.606  -5.799   0.075  H25  LRS  61  
LRS  H26  H26  H  0  1  N  N  N  14.599  37.055  56.046   2.499  -6.959   0.848  H26  LRS  62  
LRS  H27  H27  H  0  1  N  N  N  15.431  37.241  53.903   3.270  -7.742  -1.273  H27  LRS  63  
LRS  H28  H28  H  0  1  N  N  N  10.632  48.442  59.034  -2.824   3.516  -0.596  H28  LRS  64  
LRS  H29  H29  H  0  1  N  N  N  12.387  48.117  58.831  -3.972   3.398   0.760  H29  LRS  65  
LRS  H30  H30  H  0  1  N  N  N  11.311  48.166  57.394  -2.219   3.352   1.070  H30  LRS  66  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LRS  C24  C23  DOUB  Y  N   1  
LRS  C24  N6   SING  Y  N   2  
LRS  N5   N6   SING  Y  N   3  
LRS  N5   C20  DOUB  Y  N   4  
LRS  C23  C22  SING  Y  N   5  
LRS  N6   C21  SING  Y  N   6  
LRS  C20  C19  SING  Y  N   7  
LRS  C22  N7   DOUB  Y  N   8  
LRS  C21  C19  DOUB  Y  N   9  
LRS  C21  N7   SING  Y  N  10  
LRS  C19  C18  SING  N  N  11  
LRS  O1   C17  SING  N  N  12  
LRS  C18  O2   DOUB  N  N  13  
LRS  C18  N4   SING  N  N  14  
LRS  C15  C16  SING  N  N  15  
LRS  C15  C14  SING  N  N  16  
LRS  C17  C14  SING  N  N  17  
LRS  N4   C3   SING  N  N  18  
LRS  C16  N3   SING  N  N  19  
LRS  C14  C13  SING  N  N  20  
LRS  C3   C2   DOUB  Y  N  21  
LRS  C3   C4   SING  Y  N  22  
LRS  N3   C4   SING  N  N  23  
LRS  N3   C12  SING  N  N  24  
LRS  C13  C12  SING  N  N  25  
LRS  C2   C1   SING  Y  N  26  
LRS  C4   C5   DOUB  Y  N  27  
LRS  C1   C6   DOUB  Y  N  28  
LRS  C1   N    SING  Y  N  29  
LRS  C5   C6   SING  Y  N  30  
LRS  C    N    SING  N  N  31  
LRS  C6   N1   SING  Y  N  32  
LRS  N    C7   SING  Y  N  33  
LRS  C8   C9   SING  N  N  34  
LRS  C8   N2   SING  N  N  35  
LRS  C7   N1   DOUB  Y  N  36  
LRS  C7   N2   SING  N  N  37  
LRS  C9   O    SING  N  N  38  
LRS  N2   C11  SING  N  N  39  
LRS  O    C10  SING  N  N  40  
LRS  C11  C10  SING  N  N  41  
LRS  C14  H1   SING  N  N  42  
LRS  C5   H2   SING  N  N  43  
LRS  C11  H3   SING  N  N  44  
LRS  C11  H4   SING  N  N  45  
LRS  C8   H5   SING  N  N  46  
LRS  C8   H6   SING  N  N  47  
LRS  C9   H7   SING  N  N  48  
LRS  C9   H8   SING  N  N  49  
LRS  C10  H9   SING  N  N  50  
LRS  C10  H10  SING  N  N  51  
LRS  C12  H11  SING  N  N  52  
LRS  C12  H12  SING  N  N  53  
LRS  C13  H13  SING  N  N  54  
LRS  C13  H14  SING  N  N  55  
LRS  C22  H15  SING  N  N  56  
LRS  C23  H16  SING  N  N  57  
LRS  C24  H17  SING  N  N  58  
LRS  C20  H18  SING  N  N  59  
LRS  N4   H19  SING  N  N  60  
LRS  C2   H20  SING  N  N  61  
LRS  C16  H21  SING  N  N  62  
LRS  C16  H22  SING  N  N  63  
LRS  C15  H23  SING  N  N  64  
LRS  C15  H24  SING  N  N  65  
LRS  C17  H25  SING  N  N  66  
LRS  C17  H26  SING  N  N  67  
LRS  O1   H27  SING  N  N  68  
LRS  C    H28  SING  N  N  69  
LRS  C    H29  SING  N  N  70  
LRS  C    H30  SING  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LRS  SMILES            ACDLabs               12.01  "c3(cc2nc(N1CCOCC1)n(c2cc3NC(=O)c5c4ncccn4nc5)C)N6CCC(CC6)CO"  
LRS  InChI             InChI                 1.03   "InChI=1S/C25H30N8O3/c1-30-21-13-20(28-24(35)18-15-27-33-6-2-5-26-23(18)33)22(31-7-3-17(16-34)4-8-31)14-19(21)29-25(30)32-9-11-36-12-10-32/h2,5-6,13-15,17,34H,3-4,7-12,16H2,1H3,(H,28,35)"  
LRS  InChIKey          InChI                 1.03   LVDMRCKBQDTUEU-UHFFFAOYSA-N  
LRS  SMILES_CANONICAL  CACTVS                3.385  "Cn1c2cc(NC(=O)c3cnn4cccnc34)c(cc2nc1N5CCOCC5)N6CCC(CO)CC6"  
LRS  SMILES            CACTVS                3.385  "Cn1c2cc(NC(=O)c3cnn4cccnc34)c(cc2nc1N5CCOCC5)N6CCC(CO)CC6"  
LRS  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cn1c2cc(c(cc2nc1N3CCOCC3)N4CCC(CC4)CO)NC(=O)c5cnn6c5nccc6"  
LRS  SMILES            "OpenEye OEToolkits"  2.0.7  "Cn1c2cc(c(cc2nc1N3CCOCC3)N4CCC(CC4)CO)NC(=O)c5cnn6c5nccc6"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LRS  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{5-[4-(hydroxymethyl)piperidin-1-yl]-1-methyl-2-(morpholin-4-yl)-1H-benzimidazol-6-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide"  
LRS  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N}-[6-[4-(hydroxymethyl)piperidin-1-yl]-3-methyl-2-morpholin-4-yl-benzimidazol-5-yl]pyrazolo[1,5-a]pyrimidine-3-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LRS  "Create component"  2019-03-13  RCSB  
LRS  "Initial release"   2019-05-22  RCSB  
##
