data_L9S
#

_chem_comp.id                                   L9S
_chem_comp.name                                 "N-[2-fluoro-6-(pyrrolidin-1-yl)phenyl]-N'-{3-[(2R)-1-(2-hydroxyethyl)-4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperazin-2-yl]phenyl}urea"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H33 F N8 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-02-15
_chem_comp.pdbx_modified_date                   2019-06-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       544.623
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    L9S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6NZM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
L9S  C3   C1   C  0  1  N  N  N   -0.665  -22.379  -17.514   4.628   2.140  -0.684  C3   L9S   1  
L9S  N4   N1   N  0  1  N  N  N  -11.335  -20.952  -14.521  -6.755  -1.893  -0.285  N4   L9S   2  
L9S  C5   C2   C  0  1  N  N  R   -2.975  -22.003  -17.862   2.638   0.828  -0.267  C5   L9S   3  
L9S  C7   C3   C  0  1  Y  N  N   -4.441  -23.966  -18.643   1.184   1.378   1.695  C7   L9S   4  
L9S  C14  C4   C  0  1  Y  N  N  -13.529  -22.016  -18.113  -7.067   2.267  -0.264  C14  L9S   5  
L9S  C15  C5   C  0  1  Y  N  N  -14.107  -21.919  -16.852  -8.202   1.486  -0.141  C15  L9S   6  
L9S  C13  C6   C  0  1  Y  N  N  -12.180  -21.777  -18.098  -5.824   1.673  -0.395  C13  L9S   7  
L9S  C12  C7   C  0  1  Y  N  N  -11.406  -21.501  -16.959  -5.715   0.288  -0.402  C12  L9S   8  
L9S  C11  C8   C  0  1  N  N  N   -9.159  -22.216  -17.588  -3.369   0.262   0.013  C11  L9S   9  
L9S  C8   C9   C  0  1  Y  N  N   -5.689  -24.533  -18.852  -0.040   1.382   2.339  C8   L9S  10  
L9S  C10  C10  C  0  1  Y  N  N   -6.731  -22.566  -18.022  -1.031   0.276   0.456  C10  L9S  11  
L9S  O1   O1   O  0  1  N  N  N   -0.947  -25.637  -16.255   4.283   4.842  -0.356  O1   L9S  12  
L9S  C1   C11  C  0  1  N  N  N   -2.264  -25.162  -16.420   2.992   4.529   0.172  C1   L9S  13  
L9S  C2   C12  C  0  1  N  N  N   -2.266  -23.650  -16.291   2.480   3.236  -0.466  C2   L9S  14  
L9S  N1   N2   N  0  1  N  N  N   -1.983  -23.014  -17.554   3.315   2.110  -0.027  N1   L9S  15  
L9S  C4   C13  C  0  1  N  N  N   -0.290  -21.927  -18.906   5.494   1.000  -0.141  C4   L9S  16  
L9S  C6   C14  C  0  1  Y  N  N   -4.306  -22.688  -18.114   1.303   0.824   0.433  C6   L9S  17  
L9S  C9   C15  C  0  1  Y  N  N   -6.844  -23.836  -18.563  -1.147   0.833   1.723  C9   L9S  18  
L9S  N2   N3   N  0  1  N  N  N   -7.854  -21.766  -17.697  -2.150  -0.285  -0.168  N2   L9S  19  
L9S  N3   N4   N  0  1  N  N  N  -10.007  -21.236  -17.128  -4.456  -0.317  -0.534  N3   L9S  20  
L9S  F1   F1   F  0  1  N  N  N  -11.597  -21.884  -19.283  -4.718   2.439  -0.516  F1   L9S  21  
L9S  C16  C16  C  0  1  Y  N  N  -13.368  -21.580  -15.712  -8.101   0.107  -0.147  C16  L9S  22  
L9S  C17  C17  C  0  1  Y  N  N  -12.016  -21.348  -15.729  -6.859  -0.498  -0.278  C17  L9S  23  
L9S  C18  C18  C  0  1  N  N  N  -12.161  -21.063  -13.306  -7.333  -2.476   0.953  C18  L9S  24  
L9S  C19  C19  C  0  1  N  N  N  -11.198  -20.853  -12.179  -7.614  -3.946   0.555  C19  L9S  25  
L9S  C20  C20  C  0  1  N  N  N   -9.922  -21.474  -12.792  -8.089  -3.823  -0.911  C20  L9S  26  
L9S  C21  C21  C  0  1  N  N  N  -10.117  -21.669  -14.290  -7.528  -2.476  -1.403  C21  L9S  27  
L9S  O2   O2   O  0  1  N  N  N   -9.557  -23.328  -17.939  -3.487   1.278   0.670  O2   L9S  28  
L9S  C22  C22  C  0  1  Y  N  N   -5.485  -22.008  -17.824   0.201   0.269  -0.185  C22  L9S  29  
L9S  C23  C23  C  0  1  N  N  N   -2.721  -21.502  -19.234   3.503  -0.313   0.275  C23  L9S  30  
L9S  N5   N5   N  0  1  N  N  N   -1.368  -21.008  -19.293   4.817  -0.282  -0.382  N5   L9S  31  
L9S  C24  C24  C  0  1  Y  N  N   -1.002  -19.838  -19.932   5.603  -1.343   0.031  C24  L9S  32  
L9S  N6   N6   N  0  1  Y  N  N    0.314  -19.716  -20.291   5.146  -2.227   0.913  N6   L9S  33  
L9S  C25  C25  C  0  1  Y  N  N    0.669  -18.605  -20.884   5.893  -3.241   1.311  C25  L9S  34  
L9S  N7   N7   N  0  1  Y  N  N   -0.095  -17.571  -21.267   7.116  -3.439   0.869  N7   L9S  35  
L9S  C26  C26  C  0  1  Y  N  N   -1.347  -17.716  -20.872   7.663  -2.608  -0.017  C26  L9S  36  
L9S  C27  C27  C  0  1  Y  N  N   -1.897  -18.817  -20.242   6.901  -1.516  -0.474  C27  L9S  37  
L9S  C28  C28  C  0  1  Y  N  N   -3.295  -18.513  -20.041   7.749  -0.795  -1.420  C28  L9S  38  
L9S  C29  C29  C  0  1  Y  N  N   -3.551  -17.265  -20.633   8.916  -1.457  -1.480  C29  L9S  39  
L9S  N8   N8   N  0  1  Y  N  N   -2.339  -16.792  -21.094   8.875  -2.546  -0.648  N8   L9S  40  
L9S  H1   H1   H  0  1  N  N  N    0.080  -23.101  -17.148   4.500   2.019  -1.760  H1   L9S  41  
L9S  H2   H2   H  0  1  N  N  N   -0.695  -21.510  -16.840   5.115   3.094  -0.481  H2   L9S  42  
L9S  H3   H3   H  0  1  N  N  N   -3.044  -21.202  -17.111   2.486   0.692  -1.338  H3   L9S  43  
L9S  H4   H4   H  0  1  N  N  N   -3.555  -24.529  -18.897   2.048   1.812   2.177  H4   L9S  44  
L9S  H5   H5   H  0  1  N  N  N  -14.084  -22.254  -19.008  -7.152   3.344  -0.263  H5   L9S  45  
L9S  H6   H6   H  0  1  N  N  N  -15.164  -22.112  -16.748  -9.170   1.954  -0.040  H6   L9S  46  
L9S  H7   H7   H  0  1  N  N  N   -5.758  -25.536  -19.247  -0.129   1.815   3.324  H7   L9S  47  
L9S  H8   H8   H  0  1  N  N  N   -0.939  -26.584  -16.335   4.669   5.652   0.005  H8   L9S  48  
L9S  H9   H9   H  0  1  N  N  N   -2.913  -25.599  -15.646   3.063   4.398   1.252  H9   L9S  49  
L9S  H10  H10  H  0  1  N  N  N   -2.637  -25.447  -17.415   2.302   5.343  -0.051  H10  L9S  50  
L9S  H11  H11  H  0  1  N  N  N   -1.499  -23.352  -15.561   1.448   3.065  -0.161  H11  L9S  51  
L9S  H12  H12  H  0  1  N  N  N   -3.255  -23.322  -15.939   2.529   3.322  -1.552  H12  L9S  52  
L9S  H14  H14  H  0  1  N  N  N   -0.243  -22.784  -19.594   6.459   1.003  -0.649  H14  L9S  53  
L9S  H15  H15  H  0  1  N  N  N    0.680  -21.408  -18.899   5.645   1.136   0.929  H15  L9S  54  
L9S  H16  H16  H  0  1  N  N  N   -7.814  -24.271  -18.754  -2.103   0.836   2.226  H16  L9S  55  
L9S  H17  H17  H  0  1  N  N  N   -7.690  -20.793  -17.532  -2.049  -1.068  -0.732  H17  L9S  56  
L9S  H18  H18  H  0  1  N  N  N   -9.645  -20.330  -16.909  -4.368  -1.153  -1.019  H18  L9S  57  
L9S  H19  H19  H  0  1  N  N  N  -13.890  -21.497  -14.770  -8.989  -0.499  -0.051  H19  L9S  58  
L9S  H20  H20  H  0  1  N  N  N  -12.945  -20.291  -13.297  -6.615  -2.430   1.771  H20  L9S  59  
L9S  H21  H21  H  0  1  N  N  N  -12.625  -22.058  -13.241  -8.258  -1.967   1.223  H21  L9S  60  
L9S  H22  H22  H  0  1  N  N  N  -11.063  -19.785  -11.952  -6.705  -4.543   0.617  H22  L9S  61  
L9S  H23  H23  H  0  1  N  N  N  -11.513  -21.384  -11.269  -8.397  -4.373   1.182  H23  L9S  62  
L9S  H24  H24  H  0  1  N  N  N   -9.725  -22.447  -12.319  -7.688  -4.641  -1.509  H24  L9S  63  
L9S  H25  H25  H  0  1  N  N  N   -9.068  -20.802  -12.618  -9.178  -3.820  -0.957  H25  L9S  64  
L9S  H26  H26  H  0  1  N  N  N  -10.224  -22.734  -14.545  -8.347  -1.810  -1.676  H26  L9S  65  
L9S  H27  H27  H  0  1  N  N  N   -9.283  -21.237  -14.862  -6.875  -2.637  -2.261  H27  L9S  66  
L9S  H28  H28  H  0  1  N  N  N   -5.422  -21.005  -17.429   0.294  -0.163  -1.171  H28  L9S  67  
L9S  H29  H29  H  0  1  N  N  N   -3.424  -20.689  -19.469   3.632  -0.192   1.351  H29  L9S  68  
L9S  H30  H30  H  0  1  N  N  N   -2.850  -22.320  -19.958   3.017  -1.267   0.072  H30  L9S  69  
L9S  H31  H31  H  0  1  N  N  N    1.724  -18.507  -21.094   5.483  -3.936   2.029  H31  L9S  70  
L9S  H32  H32  H  0  1  N  N  N   -4.014  -19.134  -19.528   7.488   0.099  -1.967  H32  L9S  71  
L9S  H33  H33  H  0  1  N  N  N   -4.509  -16.772  -20.712   9.759  -1.176  -2.093  H33  L9S  72  
L9S  H34  H34  H  0  1  N  N  N   -2.202  -15.902  -21.529   9.599  -3.179  -0.524  H34  L9S  73  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
L9S  N7   C25  DOUB  Y  N   1  
L9S  N7   C26  SING  Y  N   2  
L9S  N8   C26  SING  Y  N   3  
L9S  N8   C29  SING  Y  N   4  
L9S  C25  N6   SING  Y  N   5  
L9S  C26  C27  DOUB  Y  N   6  
L9S  C29  C28  DOUB  Y  N   7  
L9S  N6   C24  DOUB  Y  N   8  
L9S  C27  C28  SING  Y  N   9  
L9S  C27  C24  SING  Y  N  10  
L9S  C24  N5   SING  N  N  11  
L9S  N5   C23  SING  N  N  12  
L9S  N5   C4   SING  N  N  13  
L9S  F1   C13  SING  N  N  14  
L9S  C23  C5   SING  N  N  15  
L9S  C4   C3   SING  N  N  16  
L9S  C8   C7   DOUB  Y  N  17  
L9S  C8   C9   SING  Y  N  18  
L9S  C7   C6   SING  Y  N  19  
L9S  C9   C10  DOUB  Y  N  20  
L9S  C6   C5   SING  N  N  21  
L9S  C6   C22  DOUB  Y  N  22  
L9S  C14  C13  DOUB  Y  N  23  
L9S  C14  C15  SING  Y  N  24  
L9S  C13  C12  SING  Y  N  25  
L9S  C10  C22  SING  Y  N  26  
L9S  C10  N2   SING  N  N  27  
L9S  O2   C11  DOUB  N  N  28  
L9S  C5   N1   SING  N  N  29  
L9S  N2   C11  SING  N  N  30  
L9S  C11  N3   SING  N  N  31  
L9S  N1   C3   SING  N  N  32  
L9S  N1   C2   SING  N  N  33  
L9S  N3   C12  SING  N  N  34  
L9S  C12  C17  DOUB  Y  N  35  
L9S  C15  C16  DOUB  Y  N  36  
L9S  C1   C2   SING  N  N  37  
L9S  C1   O1   SING  N  N  38  
L9S  C17  C16  SING  Y  N  39  
L9S  C17  N4   SING  N  N  40  
L9S  N4   C21  SING  N  N  41  
L9S  N4   C18  SING  N  N  42  
L9S  C21  C20  SING  N  N  43  
L9S  C18  C19  SING  N  N  44  
L9S  C20  C19  SING  N  N  45  
L9S  C3   H1   SING  N  N  46  
L9S  C3   H2   SING  N  N  47  
L9S  C5   H3   SING  N  N  48  
L9S  C7   H4   SING  N  N  49  
L9S  C14  H5   SING  N  N  50  
L9S  C15  H6   SING  N  N  51  
L9S  C8   H7   SING  N  N  52  
L9S  O1   H8   SING  N  N  53  
L9S  C1   H9   SING  N  N  54  
L9S  C1   H10  SING  N  N  55  
L9S  C2   H11  SING  N  N  56  
L9S  C2   H12  SING  N  N  57  
L9S  C4   H14  SING  N  N  58  
L9S  C4   H15  SING  N  N  59  
L9S  C9   H16  SING  N  N  60  
L9S  N2   H17  SING  N  N  61  
L9S  N3   H18  SING  N  N  62  
L9S  C16  H19  SING  N  N  63  
L9S  C18  H20  SING  N  N  64  
L9S  C18  H21  SING  N  N  65  
L9S  C19  H22  SING  N  N  66  
L9S  C19  H23  SING  N  N  67  
L9S  C20  H24  SING  N  N  68  
L9S  C20  H25  SING  N  N  69  
L9S  C21  H26  SING  N  N  70  
L9S  C21  H27  SING  N  N  71  
L9S  C22  H28  SING  N  N  72  
L9S  C23  H29  SING  N  N  73  
L9S  C23  H30  SING  N  N  74  
L9S  C25  H31  SING  N  N  75  
L9S  C28  H32  SING  N  N  76  
L9S  C29  H33  SING  N  N  77  
L9S  N8   H34  SING  N  N  78  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
L9S  SMILES            ACDLabs               12.01  "C4N(C(c1cccc(c1)NC(Nc3c(cccc3N2CCCC2)F)=O)CN(C4)c5ncnc6c5ccn6)CCO"  
L9S  InChI             InChI                 1.03   "InChI=1S/C29H33FN8O2/c30-23-7-4-8-24(36-11-1-2-12-36)26(23)35-29(40)34-21-6-3-5-20(17-21)25-18-38(14-13-37(25)15-16-39)28-22-9-10-31-27(22)32-19-33-28/h3-10,17,19,25,39H,1-2,11-16,18H2,(H,31,32,33)(H2,34,35,40)/t25-/m0/s1"  
L9S  InChIKey          InChI                 1.03   ZJSNZHATZAWKIQ-VWLOTQADSA-N  
L9S  SMILES_CANONICAL  CACTVS                3.385  "OCCN1CCN(C[C@H]1c2cccc(NC(=O)Nc3c(F)cccc3N4CCCC4)c2)c5ncnc6[nH]ccc56"  
L9S  SMILES            CACTVS                3.385  "OCCN1CCN(C[CH]1c2cccc(NC(=O)Nc3c(F)cccc3N4CCCC4)c2)c5ncnc6[nH]ccc56"  
L9S  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)NC(=O)Nc2c(cccc2F)N3CCCC3)[C@@H]4CN(CCN4CCO)c5c6cc[nH]c6ncn5"  
L9S  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)NC(=O)Nc2c(cccc2F)N3CCCC3)C4CN(CCN4CCO)c5c6cc[nH]c6ncn5"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
L9S  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[2-fluoro-6-(pyrrolidin-1-yl)phenyl]-N'-{3-[(2R)-1-(2-hydroxyethyl)-4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperazin-2-yl]phenyl}urea"  
L9S  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "1-(2-fluoranyl-6-pyrrolidin-1-yl-phenyl)-3-[3-[(2~{R})-1-(2-hydroxyethyl)-4-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)piperazin-2-yl]phenyl]urea"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
L9S  "Create component"  2019-02-15  RCSB  
L9S  "Initial release"   2019-06-12  RCSB  
##
