data_H1S
#

_chem_comp.id                                   H1S
_chem_comp.name                                 "HEPARIN DISACCHARIDE I-S"
_chem_comp.type                                 saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C12 H15 N O19 S3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   -4
_chem_comp.pdbx_initial_date                    2004-08-03
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       573.438
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    H1S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1U4L
_chem_comp.pdbx_subcomponent_list               "SGN UAP"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
_chem_comp_atom.pdbx_residue_numbering
_chem_comp_atom.pdbx_polymer_type
_chem_comp_atom.pdbx_component_id
H1S  C10  C10  C   0  1  N  N  S  17.826   7.465  32.230  -3.218   1.508   0.210  C1   SGN   1  1  polymer  1  
H1S  C8   C8   C   0  1  N  N  R  17.902   6.234  33.153  -3.354  -0.014   0.299  C2   SGN   2  1  polymer  1  
H1S  C4   C4   C   0  1  N  N  R  17.578   6.681  34.581  -2.094  -0.592   0.950  C3   SGN   3  1  polymer  1  
H1S  C1   C1   C   0  1  N  N  S  18.604   7.744  35.047  -0.870  -0.091   0.175  C4   SGN   4  1  polymer  1  
H1S  C2   C2   C   0  1  N  N  R  18.562   8.923  34.009  -0.920   1.436   0.096  C5   SGN   5  1  polymer  1  
H1S  C6   C6   C   0  1  N  N  N  19.597  10.006  34.392   0.316   1.946  -0.647  C6   SGN   6  1  polymer  1  
H1S  N14  N14  N   0  1  N  N  N  16.931   5.233  32.726  -4.526  -0.354   1.110  N    SGN   7  1  polymer  1  
H1S  O15  O15  O   0  1  N  N  N  16.495   8.016  32.257  -3.035   2.046   1.521  O1   SGN   8  1  polymer  1  
H1S  O9   O9   O   0  1  N  N  N  17.625   5.571  35.485  -2.139  -2.019   0.905  O3   SGN   9  1  polymer  1  
H1S  O3   O3   O   0  1  N  N  N  18.409   8.245  36.398   0.323  -0.496   0.851  O4   SGN  10  1  polymer  1  
H1S  O5   O5   O   0  1  N  N  N  18.783   8.478  32.639  -2.095   1.845  -0.602  O5   SGN  11  1  polymer  1  
H1S  O11  O11  O   0  1  N  N  N  20.894   9.715  33.851   0.335   3.375  -0.615  O6   SGN  12  1  polymer  1  
H1S  S20  S20  S   0  1  N  N  N  17.386   3.649  32.636  -5.976  -0.674   0.377  S1   SGN  13  1  polymer  1  
H1S  O28  O28  O   0  1  N  N  N  17.659   3.154  33.941  -5.784  -1.885  -0.405  O1S  SGN  14  1  polymer  1  
H1S  O29  O29  O   0  1  N  N  N  16.333   2.889  32.058  -6.946  -0.854   1.446  O2S  SGN  15  1  polymer  1  
H1S  O30  O30  O  -1  1  N  N  N  18.744   3.525  31.692  -6.278   0.480  -0.456  O3S  SGN  16  1  polymer  1  
H1S  S16  S16  S   0  1  N  N  N  21.952  10.298  34.806   1.583   3.815  -1.368  S2   SGN  17  1  polymer  1  
H1S  O21  O21  O   0  1  N  N  N  21.850   9.682  36.091   1.300   3.623  -2.781  O4S  SGN  18  1  polymer  1  
H1S  O22  O22  O   0  1  N  N  N  23.241  10.041  34.284   1.794   5.214  -1.031  O5S  SGN  19  1  polymer  1  
H1S  O23  O23  O  -1  1  N  N  N  21.744  11.939  34.961   2.666   2.964  -0.900  O6S  SGN  20  1  polymer  1  
H1S  S26  S26  S   0  1  N  N  N  14.095   8.167  38.026   3.839  -0.465   2.398  S    UAP  21  2  polymer  1  
H1S  C7   C7   C   0  1  N  N  R  17.081   8.840  36.581   1.245  -0.916  -0.157  C1   UAP  22  2  polymer  1  
H1S  C12  C12  C   0  1  N  N  R  16.533   8.572  38.015   2.629  -1.131   0.472  C2   UAP  23  2  polymer  1  
H1S  O18  O18  O   0  1  N  N  N  15.233   9.199  38.134   3.012   0.026   1.218  O2   UAP  24  2  polymer  1  
H1S  C17  C17  C   0  1  N  N  S  17.499   9.228  39.057   3.623  -1.366  -0.674  C3   UAP  25  2  polymer  1  
H1S  O25  O25  O   0  1  N  N  N  18.641   8.383  39.252   4.815  -1.968  -0.164  O3   UAP  26  2  polymer  1  
H1S  C24  C24  C   0  1  N  N  N  17.970  10.611  38.609   2.976  -2.288  -1.675  C4   UAP  27  2  polymer  1  
H1S  C19  C19  C   0  1  N  N  N  17.781  11.065  37.347   1.688  -2.581  -1.636  C5   UAP  28  2  polymer  1  
H1S  O13  O13  O   0  1  N  N  N  17.156  10.296  36.402   0.796  -2.138  -0.733  O5   UAP  29  2  polymer  1  
H1S  C27  C27  C   0  1  N  N  N  18.232  12.409  36.961   1.180  -3.479  -2.684  C6   UAP  30  2  polymer  1  
H1S  O31  O31  O   0  1  N  N  N  12.869   8.830  38.306   5.141  -0.831   1.862  O1S  UAP  31  2  polymer  1  
H1S  O32  O32  O   0  1  N  N  N  14.038   7.626  36.705   3.919   0.645   3.334  O2S  UAP  32  2  polymer  1  
H1S  O33  O33  O  -1  1  N  N  N  14.315   6.943  39.128   3.128  -1.607   2.952  O3S  UAP  33  2  polymer  1  
H1S  O34  O34  O  -1  1  N  N  N  17.702  12.970  36.025  -0.003  -3.789  -2.704  O61  UAP  34  2  polymer  1  
H1S  O35  O35  O   0  1  N  N  N  19.255  13.054  37.667   1.941  -3.917  -3.537  O62  UAP  35  2  polymer  1  
H1S  H10  H10  H   0  1  N  N  N  18.075   7.141  31.192  -4.123   1.928  -0.231  H1   SGN  36  1  polymer  1  
H1S  H8   H8   H   0  1  N  N  N  18.923   5.788  33.108  -3.471  -0.428  -0.702  H2   SGN  37  1  polymer  1  
H1S  H4   H4   H   0  1  N  N  N  16.550   7.113  34.582  -2.032  -0.260   1.986  H3   SGN  38  1  polymer  1  
H1S  H1   H1   H   0  1  N  N  N  19.602   7.249  35.086  -0.879  -0.510  -0.831  H4   SGN  39  1  polymer  1  
H1S  H2   H2   H   0  1  N  N  N  17.534   9.354  34.048  -0.934   1.851   1.104  H5   SGN  40  1  polymer  1  
H1S  H61  1H6  H   0  1  N  N  N  19.641  10.154  35.496   1.215   1.560  -0.165  H61  SGN  41  1  polymer  1  
H1S  H62  2H6  H   0  1  N  N  N  19.251  11.023  34.094   0.284   1.606  -1.682  H62  SGN  42  1  polymer  1  
H1S  H14  H14  H   0  1  N  N  N  16.549   5.514  31.823  -4.452  -0.393   2.076  HN   SGN  43  1  polymer  1  
H1S  H15  H15  H   0  1  N  N  N  15.869   7.353  31.990  -2.956   3.005   1.422  HO1  SGN  44  1  polymer  1  
H1S  HO9  HO9  H   0  1  N  N  N  16.996   4.919  35.199  -2.923  -2.290   1.403  HO3  SGN  45  1  polymer  1  
H1S  H7   H7   H   0  1  N  N  N  16.403   8.377  35.826   1.313  -0.152  -0.931  H1   UAP  46  2  polymer  1  
H1S  H12  H12  H   0  1  N  N  N  16.457   7.475  38.200   2.605  -2.003   1.127  H2   UAP  47  2  polymer  1  
H1S  H17  H17  H   0  1  N  N  N  16.934   9.348  40.011   3.865  -0.417  -1.150  H3   UAP  48  2  polymer  1  
H1S  H25  H25  H   0  1  N  N  N  19.227   8.781  39.885   5.399  -2.114  -0.921  HO3  UAP  49  2  polymer  1  
H1S  H24  H24  H   0  1  N  N  N  18.490  11.343  39.250   3.586  -2.725  -2.452  H4   UAP  50  2  polymer  1  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H1S  C1   C2   SING  N  N   1  
H1S  C1   O3   SING  N  N   2  
H1S  C1   C4   SING  N  N   3  
H1S  C1   H1   SING  N  N   4  
H1S  C2   O5   SING  N  N   5  
H1S  C2   C6   SING  N  N   6  
H1S  C2   H2   SING  N  N   7  
H1S  O3   C7   SING  N  N   8  
H1S  C4   C8   SING  N  N   9  
H1S  C4   O9   SING  N  N  10  
H1S  C4   H4   SING  N  N  11  
H1S  O5   C10  SING  N  N  12  
H1S  C6   O11  SING  N  N  13  
H1S  C6   H61  SING  N  N  14  
H1S  C6   H62  SING  N  N  15  
H1S  C7   C12  SING  N  N  16  
H1S  C7   O13  SING  N  N  17  
H1S  C7   H7   SING  N  N  18  
H1S  C8   C10  SING  N  N  19  
H1S  C8   N14  SING  N  N  20  
H1S  C8   H8   SING  N  N  21  
H1S  O9   HO9  SING  N  N  22  
H1S  C10  O15  SING  N  N  23  
H1S  C10  H10  SING  N  N  24  
H1S  O11  S16  SING  N  N  25  
H1S  C12  C17  SING  N  N  26  
H1S  C12  O18  SING  N  N  27  
H1S  C12  H12  SING  N  N  28  
H1S  O13  C19  SING  N  N  29  
H1S  N14  S20  SING  N  N  30  
H1S  N14  H14  SING  N  N  31  
H1S  O15  H15  SING  N  N  32  
H1S  S16  O21  DOUB  N  N  33  
H1S  S16  O22  DOUB  N  N  34  
H1S  S16  O23  SING  N  N  35  
H1S  C17  C24  SING  N  N  36  
H1S  C17  O25  SING  N  N  37  
H1S  C17  H17  SING  N  N  38  
H1S  O18  S26  SING  N  N  39  
H1S  C19  C24  DOUB  N  N  40  
H1S  C19  C27  SING  N  N  41  
H1S  S20  O28  DOUB  N  N  42  
H1S  S20  O29  DOUB  N  N  43  
H1S  S20  O30  SING  N  N  44  
H1S  C24  H24  SING  N  N  45  
H1S  O25  H25  SING  N  N  46  
H1S  S26  O31  DOUB  N  N  47  
H1S  S26  O32  DOUB  N  N  48  
H1S  S26  O33  SING  N  N  49  
H1S  C27  O34  SING  N  N  50  
H1S  C27  O35  DOUB  N  N  51  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H1S  SMILES            ACDLabs               12.01  "[O-]S(=O)(=O)OC2C(O)C=C(OC2OC1C(OC(O)C(NS([O-])(=O)=O)C1O)COS([O-])(=O)=O)C([O-])=O"  
H1S  InChI             InChI                 1.03   "InChI=1S/C12H19NO19S3/c14-3-1-4(10(16)17)30-12(8(3)32-35(25,26)27)31-9-5(2-28-34(22,23)24)29-11(18)6(7(9)15)13-33(19,20)21/h1,3,5-9,11-15,18H,2H2,(H,16,17)(H,19,20,21)(H,22,23,24)(H,25,26,27)/p-4/t3-,5+,6+,7+,8+,9+,11-,12-/m0/s1"  
H1S  InChIKey          InChI                 1.03   LRPGJWKAYQRIAQ-GYBHJADLSA-J  
H1S  SMILES_CANONICAL  CACTVS                3.370  "O[C@H]1O[C@H](CO[S]([O-])(=O)=O)[C@@H](O[C@@H]2OC(=C[C@H](O)[C@H]2O[S]([O-])(=O)=O)C([O-])=O)[C@H](O)[C@H]1N[S]([O-])(=O)=O"  
H1S  SMILES            CACTVS                3.370  "O[CH]1O[CH](CO[S]([O-])(=O)=O)[CH](O[CH]2OC(=C[CH](O)[CH]2O[S]([O-])(=O)=O)C([O-])=O)[CH](O)[CH]1N[S]([O-])(=O)=O"  
H1S  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "C1=C(O[C@H]([C@@H]([C@H]1O)OS(=O)(=O)[O-])O[C@@H]2[C@H](O[C@@H]([C@@H]([C@H]2O)NS(=O)(=O)[O-])O)COS(=O)(=O)[O-])C(=O)[O-]"  
H1S  SMILES            "OpenEye OEToolkits"  1.7.2  "C1=C(OC(C(C1O)OS(=O)(=O)[O-])OC2C(OC(C(C2O)NS(=O)(=O)[O-])O)COS(=O)(=O)[O-])C(=O)[O-]"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
H1S  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-deoxy-4-O-(4-deoxy-2-O-sulfonato-alpha-L-threo-hex-4-enopyranuronosyl)-6-O-sulfonato-2-(sulfonatoamino)-alpha-D-glucopyranose"  
H1S  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.2  "(2R,3R,4S)-2-[(2R,3S,4R,5R,6S)-4,6-bis(oxidanyl)-5-(sulfonatoamino)-2-(sulfonatooxymethyl)oxan-3-yl]oxy-4-oxidanyl-3-sulfonatooxy-3,4-dihydro-2H-pyran-6-carboxylate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H1S  "Create component"    2004-08-03  RCSB  
H1S  "Modify descriptor"   2011-06-04  RCSB  
H1S  "Modify name"         2011-06-07  RCSB  
H1S  "Modify descriptor"   2011-06-07  RCSB  
H1S  "Modify identifier"   2011-06-07  RCSB  
H1S  "Other modification"  2020-07-03  RCSB  
H1S  "Obsolete component"  2020-07-17  RCSB  
##
