data_GNS
#

_chem_comp.id                                   GNS
_chem_comp.name                                 "2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose"
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H13 N O8 S"
_chem_comp.mon_nstd_parent_comp_id              PA1
_chem_comp.pdbx_synonyms                        
;N-SULFO-ALPHA-D-GLUCOSAMINE; 2-deoxy-2-(sulfoamino)-alpha-D-glucose; 2-deoxy-2-(sulfoamino)-D-glucose;
2-deoxy-2-(sulfoamino)-glucose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2005-10-31
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       259.234
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GNS
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2ERM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  GNS  N-SULFO-ALPHA-D-GLUCOSAMINE               PDB  ?  
2  GNS  "2-deoxy-2-(sulfoamino)-alpha-D-glucose"  PDB  ?  
3  GNS  "2-deoxy-2-(sulfoamino)-D-glucose"        PDB  ?  
4  GNS  "2-deoxy-2-(sulfoamino)-glucose"          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GNS  C1    C1   C  0  1  N  N  S  12.598  10.941   9.531   0.378   1.216   0.224  C1    GNS   1  
GNS  C2    C2   C  0  1  N  N  R  13.090  11.551   8.210  -0.315  -0.119  -0.058  C2    GNS   2  
GNS  N2    N    N  0  1  N  N  N  12.063  11.555   7.139  -1.599  -0.162   0.646  N2    GNS   3  
GNS  S1    S1   S  0  1  N  N  N  11.250  12.992   7.030  -2.990   0.273  -0.140  S1    GNS   4  
GNS  O1S   O1S  O  0  1  N  N  N  10.464  12.761   5.847  -3.215  -0.742  -1.252  O1S   GNS   5  
GNS  O2S   O2S  O  0  1  N  N  N  10.452  13.027   8.227  -4.050   0.093   0.789  O2S   GNS   6  
GNS  O3S   O3S  O  0  1  N  N  N  12.264  13.995   6.907  -2.718   1.513  -0.778  O3S   GNS   7  
GNS  C3    C3   C  0  1  N  N  R  14.321  10.778   7.728   0.577  -1.263   0.434  C3    GNS   8  
GNS  O3    O3   O  0  1  N  N  N  14.728  11.357   6.500  -0.028  -2.516   0.110  O3    GNS   9  
GNS  C4    C4   C  0  1  N  N  S  15.424  10.852   8.805   1.943  -1.161  -0.251  C4    GNS  10  
GNS  C5    C5   C  0  1  N  N  R  14.867  10.651  10.226   2.549   0.215   0.038  C5    GNS  11  
GNS  O5    O5   O  0  1  N  N  N  13.606  11.252  10.484   1.655   1.233  -0.417  O5    GNS  12  
GNS  C6    C6   C  0  1  N  N  N  15.892  11.131  11.256   3.887   0.347  -0.693  C6    GNS  13  
GNS  O6    O6   O  0  1  N  N  N  16.046  12.532  11.173   4.508   1.582  -0.331  O6    GNS  14  
GNS  O4    O4   O  0  1  N  N  N  16.391   9.782   8.706   2.808  -2.180   0.255  O4    GNS  15  
GNS  O1    O1   O  0  1  N  Y  N  12.406   9.539   9.396   0.550   1.376   1.633  O1    GNS  16  
GNS  H1    H1   H  0  1  N  N  N  11.623  11.345   9.841  -0.233   2.032  -0.163  H1    GNS  17  
GNS  H2    H2   H  0  1  N  N  N  13.334  12.603   8.417  -0.484  -0.223  -1.130  H2    GNS  18  
GNS  HN21  HN   H  0  0  N  N  N  12.519  11.385   6.265  -1.635  -0.446   1.573  HN21  GNS  19  
GNS  H1S   H1S  H  0  1  N  N  N   9.549  12.674   6.086  -4.010  -0.578  -1.779  H1S   GNS  20  
GNS  H3    H3   H  0  1  N  N  N  14.102   9.712   7.566   0.703  -1.188   1.515  H3    GNS  21  
GNS  HO3   HO3  H  0  1  N  Y  N  15.493  10.899   6.172   0.484  -3.285   0.393  HO3   GNS  22  
GNS  H4    H4   H  0  1  N  N  N  15.865  11.845   8.635   1.821  -1.286  -1.327  H4    GNS  23  
GNS  H5    H5   H  0  1  N  N  N  14.687   9.569  10.311   2.709   0.324   1.111  H5    GNS  24  
GNS  H61   H61  H  0  1  N  N  N  15.545  10.864  12.265   4.537  -0.482  -0.413  H61   GNS  25  
GNS  H62   H62  H  0  1  N  N  N  16.860  10.648  11.057   3.717   0.327  -1.769  H62   GNS  26  
GNS  HO6   H6O  H  0  1  N  Y  N  16.684  12.820  11.816   5.362   1.733  -0.758  HO6   GNS  27  
GNS  HO4   HO4  H  0  1  N  Y  N  17.042   9.879   9.391   3.693  -2.174  -0.136  HO4   GNS  28  
GNS  HO1   HO1  H  0  1  N  Y  N  12.102   9.180  10.221   0.984   2.203   1.885  HO1   GNS  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GNS  C1   C2    SING  N  N   1  
GNS  C1   O5    SING  N  N   2  
GNS  C1   O1    SING  N  N   3  
GNS  C1   H1    SING  N  N   4  
GNS  C2   N2    SING  N  N   5  
GNS  C2   C3    SING  N  N   6  
GNS  C2   H2    SING  N  N   7  
GNS  N2   S1    SING  N  N   8  
GNS  N2   HN21  SING  N  N   9  
GNS  S1   O1S   SING  N  N  10  
GNS  S1   O2S   DOUB  N  N  11  
GNS  S1   O3S   DOUB  N  N  12  
GNS  O1S  H1S   SING  N  N  13  
GNS  C3   O3    SING  N  N  14  
GNS  C3   C4    SING  N  N  15  
GNS  C3   H3    SING  N  N  16  
GNS  O3   HO3   SING  N  N  17  
GNS  C4   C5    SING  N  N  18  
GNS  C4   O4    SING  N  N  19  
GNS  C4   H4    SING  N  N  20  
GNS  C5   O5    SING  N  N  21  
GNS  C5   C6    SING  N  N  22  
GNS  C5   H5    SING  N  N  23  
GNS  C6   O6    SING  N  N  24  
GNS  C6   H61   SING  N  N  25  
GNS  C6   H62   SING  N  N  26  
GNS  O6   HO6   SING  N  N  27  
GNS  O4   HO4   SING  N  N  28  
GNS  O1   HO1   SING  N  N  29  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GNS  SMILES            ACDLabs               12.01  "O=S(=O)(O)NC1C(O)C(O)C(OC1O)CO"  
GNS  InChI             InChI                 1.03   "InChI=1S/C6H13NO8S/c8-1-2-4(9)5(10)3(6(11)15-2)7-16(12,13)14/h2-11H,1H2,(H,12,13,14)/t2-,3-,4-,5-,6+/m1/s1"  
GNS  InChIKey          InChI                 1.03   PRDZVHCOEWJPOB-UKFBFLRUSA-N  
GNS  SMILES_CANONICAL  CACTVS                3.370  "OC[C@H]1O[C@H](O)[C@H](N[S](O)(=O)=O)[C@@H](O)[C@@H]1O"  
GNS  SMILES            CACTVS                3.370  "OC[CH]1O[CH](O)[CH](N[S](O)(=O)=O)[CH](O)[CH]1O"  
GNS  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)NS(=O)(=O)O)O)O)O"  
GNS  SMILES            "OpenEye OEToolkits"  1.7.2  "C(C1C(C(C(C(O1)O)NS(=O)(=O)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GNS  "SYSTEMATIC NAME"                      ACDLabs               12.01  "2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose"  
GNS  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.7.2  "[(2S,3R,4R,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]sulfamic acid"  
GNS  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DGlcpNSa  
GNS  "COMMON NAME"                          GMML                  1.0    N-sulfo-a-D-glucopyranose  
GNS  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-D-GlcpNSO3  
#
_pdbx_chem_comp_related.comp_id            GNS
_pdbx_chem_comp_related.related_comp_id    PA1
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  GNS  C1    PA1  C1    "Carbohydrate core"  
 2  GNS  C2    PA1  C2    "Carbohydrate core"  
 3  GNS  C3    PA1  C3    "Carbohydrate core"  
 4  GNS  C4    PA1  C4    "Carbohydrate core"  
 5  GNS  C5    PA1  C5    "Carbohydrate core"  
 6  GNS  C6    PA1  C6    "Carbohydrate core"  
 7  GNS  N2    PA1  N2    "Carbohydrate core"  
 8  GNS  O1    PA1  O1    "Carbohydrate core"  
 9  GNS  O3    PA1  O3    "Carbohydrate core"  
10  GNS  O4    PA1  O4    "Carbohydrate core"  
11  GNS  O5    PA1  O5    "Carbohydrate core"  
12  GNS  O6    PA1  O6    "Carbohydrate core"  
13  GNS  H1    PA1  H1    "Carbohydrate core"  
14  GNS  H2    PA1  H2    "Carbohydrate core"  
15  GNS  H3    PA1  H3    "Carbohydrate core"  
16  GNS  H4    PA1  H4    "Carbohydrate core"  
17  GNS  H5    PA1  H5    "Carbohydrate core"  
18  GNS  H61   PA1  H61   "Carbohydrate core"  
19  GNS  H62   PA1  H62   "Carbohydrate core"  
20  GNS  HO6   PA1  HO6   "Carbohydrate core"  
21  GNS  HN21  PA1  HN21  "Carbohydrate core"  
22  GNS  HO1   PA1  HO1   "Carbohydrate core"  
23  GNS  HO3   PA1  HO3   "Carbohydrate core"  
24  GNS  HO4   PA1  HO4   "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
GNS  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
GNS  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
GNS  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
GNS  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GNS  "Create component"          2005-10-31  RCSB  
GNS  "Modify descriptor"         2011-06-04  RCSB  
GNS  "Modify leaving atom flag"  2011-11-04  RCSB  
GNS  "Other modification"        2020-07-03  RCSB  
GNS  "Modify parent residue"     2020-07-17  RCSB  
GNS  "Modify name"               2020-07-17  RCSB  
GNS  "Modify synonyms"           2020-07-17  RCSB  
GNS  "Modify linking type"       2020-07-17  RCSB  
GNS  "Modify atom id"            2020-07-17  RCSB  
GNS  "Modify component atom id"  2020-07-17  RCSB  
GNS  "Modify leaving atom flag"  2020-07-17  RCSB  
##
