data_G9S
# 
_chem_comp.id                                    G9S 
_chem_comp.name                                  "S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] hexadecanethioate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H53 N2 O8 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-05-16 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        596.757 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     G9S 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6DFL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
G9S C1  C1  C 0 1 N N N N N N -50.371 33.564 26.342 -1.819  1.799  -1.010 C1  G9S 1  
G9S C2  C2  C 0 1 N N N N N N -50.866 36.031 26.195 -4.149  1.741  -0.300 C2  G9S 2  
G9S C3  C3  C 0 1 N N N N N N -51.806 37.194 26.471 -5.216  1.401  0.708  C3  G9S 3  
G9S C4  C4  C 0 1 N N N N N N -53.174 37.107 25.819 -6.585  1.809  0.158  C4  G9S 4  
G9S C5  C5  C 0 1 N N N N N N -54.213 35.319 24.195 -8.915  1.750  0.868  C5  G9S 5  
G9S C6  C6  C 0 1 N N N N N N -53.348 36.347 21.900 -10.094 -0.205 1.835  C6  G9S 6  
G9S C7  C7  C 0 1 N N N N N N -53.874 37.279 20.835 -10.301 -0.706 0.404  C7  G9S 7  
G9S C8  C8  C 0 1 N N N N N N -52.046 36.887 22.429 -11.280 -0.634 2.702  C8  G9S 8  
G9S C10 C9  C 0 1 N N N N N N -50.279 31.127 28.853 2.220   1.255  -0.829 C10 G9S 9  
G9S C11 C10 C 0 1 N N N N N N -50.722 30.396 30.089 3.583   1.387  -1.458 C11 G9S 10 
G9S C12 C11 C 0 1 N N N N N N -49.615 29.713 30.858 4.641   0.830  -0.504 C12 G9S 11 
G9S C13 C12 C 0 1 N N N N N N -48.208 29.972 30.349 6.025   0.964  -1.143 C13 G9S 12 
G9S C14 C13 C 0 1 N N N N N N -47.442 28.751 29.821 7.083   0.407  -0.189 C14 G9S 13 
G9S C15 C14 C 0 1 N N N N N N -46.421 28.119 30.754 8.467   0.541  -0.827 C15 G9S 14 
G9S C16 C15 C 0 1 N N N N N N -45.092 28.817 30.923 9.525   -0.017 0.127  C16 G9S 15 
G9S N2  N1  N 0 1 N N N N N N -51.243 34.683 26.593 -2.856  1.469  -0.030 N2  G9S 16 
G9S C19 C16 C 0 1 N N N N N N -49.293 33.313 27.366 -0.450  1.391  -0.461 C19 G9S 17 
G9S C20 C17 C 0 1 N N N N N N -53.133 35.006 21.267 -8.805  -0.801 2.403  C20 G9S 18 
G9S C21 C18 C 0 1 N N N N N N -43.878 27.973 31.298 10.909  0.117  -0.512 C21 G9S 19 
G9S C22 C19 C 0 1 N N N N N N -42.763 28.752 31.990 11.967  -0.440 0.443  C22 G9S 20 
G9S C23 C20 C 0 1 N N N N N N -41.721 27.992 32.757 13.351  -0.306 -0.196 C23 G9S 21 
G9S C24 C21 C 0 1 N N N N N N -40.293 28.170 32.285 14.409  -0.863 0.758  C24 G9S 22 
G9S C25 C22 C 0 1 N N N N N N -39.144 27.637 33.132 15.793  -0.729 0.120  C25 G9S 23 
G9S C26 C23 C 0 1 N N N N N N -37.759 28.258 32.926 16.851  -1.286 1.074  C26 G9S 24 
G9S C27 C24 C 0 1 N N N N N N -37.403 29.460 33.781 18.235  -1.153 0.435  C27 G9S 25 
G9S C28 C25 C 0 1 N N N N N N -35.966 29.887 33.749 19.293  -1.710 1.390  C28 G9S 26 
G9S C29 C26 C 0 1 N N N N N N -35.195 29.832 35.030 20.677  -1.576 0.751  C29 G9S 27 
G9S C30 C27 C 0 1 N N S N N N -54.442 36.273 23.014 -9.992  1.322  1.831  C30 G9S 28 
G9S N3  N2  N 0 1 N N N N N N -53.635 35.737 25.481 -7.623  1.480  1.138  N3  G9S 29 
G9S O2  O1  O 0 1 N N N N N N -49.799 36.229 25.624 -4.452  2.257  -1.355 O2  G9S 30 
G9S O3  O2  O 0 1 N N N N N N -50.364 30.624 27.739 2.106   0.763  0.274  O3  G9S 31 
G9S O4  O3  O 0 1 N N N N N N -54.541 34.143 24.069 -9.211  2.339  -0.150 O4  G9S 32 
G9S O5  O4  O 0 1 N N N N N N -54.808 37.519 23.486 -11.243 1.883  1.427  O5  G9S 33 
G9S O6  O5  O 0 1 N N N N N N -55.256 37.294 20.662 -10.397 -2.131 0.408  O6  G9S 34 
G9S O8  O6  O 0 1 N N N N N N -57.320 37.976 19.375 -10.808 -4.549 -0.540 O8  G9S 35 
G9S O9  O7  O 0 1 N N N N N N -55.783 36.245 18.403 -11.823 -2.516 -1.639 O9  G9S 36 
G9S P1  P1  P 0 1 N N N N N N -55.887 37.505 19.238 -10.617 -2.999 -0.931 P1  G9S 37 
G9S S1  S1  S 0 1 N N N N N N -49.881 32.851 28.989 0.832   1.799  -1.672 S1  G9S 38 
G9S O1  O8  O 0 1 N Y N N N N -55.090 38.663 18.559 -9.333  -2.841 -1.889 O1  G9S 39 
G9S H1  H1  H 0 1 N N N N N N -50.995 32.660 26.284 -2.012  1.262  -1.939 H1  G9S 40 
G9S H2  H2  H 0 1 N N N N N N -49.879 33.733 25.373 -1.828  2.872  -1.202 H2  G9S 41 
G9S H3  H3  H 0 1 N N N N N N -51.319 38.113 26.113 -5.207  0.329  0.900  H3  G9S 42 
G9S H4  H4  H 0 1 N N N N N N -51.954 37.257 27.559 -5.023  1.939  1.636  H4  G9S 43 
G9S H5  H5  H 0 1 N N N N N N -53.144 37.694 24.889 -6.594  2.882  -0.034 H5  G9S 44 
G9S H6  H6  H 0 1 N N N N N N -53.907 37.551 26.509 -6.778  1.272  -0.770 H6  G9S 45 
G9S H7  H7  H 0 1 N N N N N N -53.419 36.986 19.877 -11.219 -0.280 -0.001 H7  G9S 46 
G9S H8  H8  H 0 1 N N N N N N -53.557 38.300 21.095 -9.456  -0.400 -0.213 H8  G9S 47 
G9S H9  H9  H 0 1 N N N N N N -51.657 36.212 23.206 -12.208 -0.289 2.245  H9  G9S 48 
G9S H10 H10 H 0 1 N N N N N N -51.318 36.958 21.607 -11.297 -1.721 2.782  H10 G9S 49 
G9S H11 H11 H 0 1 N N N N N N -52.211 37.885 22.860 -11.181 -0.197 3.695  H11 G9S 50 
G9S H12 H12 H 0 1 N N N N N N -51.206 31.121 30.759 3.607   0.828  -2.394 H12 G9S 51 
G9S H13 H13 H 0 1 N N N N N N -51.452 29.630 29.789 3.791   2.438  -1.658 H13 G9S 52 
G9S H14 H14 H 0 1 N N N N N N -49.666 30.056 31.902 4.617   1.389  0.431  H14 G9S 53 
G9S H15 H15 H 0 1 N N N N N N -49.795 28.628 30.819 4.433   -0.221 -0.305 H15 G9S 54 
G9S H16 H16 H 0 1 N N N N N N -47.625 30.401 31.177 6.049   0.405  -2.078 H16 G9S 55 
G9S H17 H17 H 0 1 N N N N N N -48.277 30.704 29.531 6.233   2.015  -1.342 H17 G9S 56 
G9S H18 H18 H 0 1 N N N N N N -48.183 27.978 29.568 7.059   0.965  0.747  H18 G9S 57 
G9S H19 H19 H 0 1 N N N N N N -46.911 29.062 28.909 6.875   -0.645 0.011  H19 G9S 58 
G9S H20 H20 H 0 1 N N N N N N -46.884 28.051 31.749 8.491   -0.018 -1.763 H20 G9S 59 
G9S H21 H21 H 0 1 N N N N N N -46.214 27.107 30.376 8.675   1.592  -1.026 H21 G9S 60 
G9S H22 H22 H 0 1 N N N N N N -44.861 29.315 29.970 9.501   0.542  1.063  H22 G9S 61 
G9S H23 H23 H 0 1 N N N N N N -45.219 29.574 31.711 9.317   -1.068 0.326  H23 G9S 62 
G9S H24 H24 H 0 1 N N N N N N -52.121 34.531 27.048 -2.614  1.056  0.813  H24 G9S 63 
G9S H25 H25 H 0 1 N N N N N N -48.651 32.502 26.993 -0.257  1.929  0.468  H25 G9S 64 
G9S H26 H26 H 0 1 N N N N N N -48.699 34.233 27.468 -0.441  0.319  -0.269 H26 G9S 65 
G9S H27 H27 H 0 1 N N N N N N -52.749 34.302 22.020 -8.920  -1.880 2.511  H27 G9S 66 
G9S H28 H28 H 0 1 N N N N N N -54.087 34.632 20.869 -7.978  -0.590 1.726  H28 G9S 67 
G9S H29 H29 H 0 1 N N N N N N -52.405 35.100 20.448 -8.599  -0.359 3.378  H29 G9S 68 
G9S H30 H30 H 0 1 N N N N N N -44.211 27.172 31.975 10.933  -0.441 -1.447 H30 G9S 69 
G9S H31 H31 H 0 1 N N N N N N -43.469 27.529 30.378 11.117  1.169  -0.711 H31 G9S 70 
G9S H32 H32 H 0 1 N N N N N N -42.238 29.326 31.212 11.943  0.119  1.378  H32 G9S 71 
G9S H33 H33 H 0 1 N N N N N N -43.243 29.446 32.696 11.759  -1.491 0.642  H33 G9S 72 
G9S H34 H34 H 0 1 N N N N N N -41.772 28.316 33.807 13.375  -0.865 -1.132 H34 G9S 73 
G9S H35 H35 H 0 1 N N N N N N -40.219 27.680 31.303 14.385  -0.304 1.694  H35 G9S 74 
G9S H36 H36 H 0 1 N N N N N N -39.417 27.786 34.187 15.817  -1.288 -0.816 H36 G9S 75 
G9S H37 H37 H 0 1 N N N N N N -39.055 26.560 32.925 16.001  0.322  -0.080 H37 G9S 76 
G9S H38 H38 H 0 1 N N N N N N -37.012 27.476 33.128 16.827  -0.728 2.010  H38 G9S 77 
G9S H39 H39 H 0 1 N N N N N N -38.014 30.309 33.440 18.259  -1.711 -0.500 H39 G9S 78 
G9S H40 H40 H 0 1 N N N N N N -35.447 29.241 33.026 19.269  -1.151 2.325  H40 G9S 79 
G9S H41 H41 H 0 1 N N N N N N -35.941 30.928 33.395 19.086  -2.761 1.589  H41 G9S 80 
G9S H42 H42 H 0 1 N N N N N N -34.164 30.172 34.853 20.885  -0.525 0.552  H42 G9S 81 
G9S H43 H43 H 0 1 N N N N N N -35.674 30.485 35.774 21.431  -1.973 1.431  H43 G9S 82 
G9S H44 H44 H 0 1 N N N N N N -35.181 28.798 35.405 20.701  -2.135 -0.185 H44 G9S 83 
G9S H45 H45 H 0 1 N N N N N N -55.326 35.868 22.499 -9.743  1.672  2.833  H45 G9S 84 
G9S H46 H46 H 0 1 N N N N N N -53.545 35.037 26.190 -7.380  1.066  1.981  H46 G9S 85 
G9S H47 H47 H 0 1 N N N N N N -55.472 37.421 24.158 -11.527 1.613  0.543  H47 G9S 86 
G9S H48 H48 H 0 1 N Y N N N N -57.895 37.384 18.904 -10.946 -5.132 -1.299 H48 G9S 87 
G9S H49 H49 H 0 1 N N N N N N -54.696 38.348 17.754 -8.505  -3.139 -1.489 H49 G9S 88 
G9S H50 H50 H 0 1 N N N N N N -41.967 26.922 32.691 13.559  0.745  -0.395 H50 G9S 89 
G9S H51 H51 H 0 1 N N N N N N -40.128 29.251 32.169 14.201  -1.914 0.957  H51 G9S 90 
G9S H52 H52 H 0 1 N N N N N N -37.689 28.569 31.873 16.643  -2.338 1.273  H52 G9S 91 
G9S H53 H53 H 0 1 N N N N N N -37.659 29.219 34.823 18.443  -0.101 0.236  H53 G9S 92 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
G9S O9  P1  DOUB N N 1  
G9S P1  O8  SING N N 2  
G9S P1  O6  SING N N 3  
G9S O6  C7  SING N N 4  
G9S C7  C6  SING N N 5  
G9S C20 C6  SING N N 6  
G9S C6  C8  SING N N 7  
G9S C6  C30 SING N N 8  
G9S C30 O5  SING N N 9  
G9S C30 C5  SING N N 10 
G9S O4  C5  DOUB N N 11 
G9S C5  N3  SING N N 12 
G9S N3  C4  SING N N 13 
G9S O2  C2  DOUB N N 14 
G9S C4  C3  SING N N 15 
G9S C2  C3  SING N N 16 
G9S C2  N2  SING N N 17 
G9S C1  N2  SING N N 18 
G9S C1  C19 SING N N 19 
G9S C19 S1  SING N N 20 
G9S O3  C10 DOUB N N 21 
G9S C10 S1  SING N N 22 
G9S C10 C11 SING N N 23 
G9S C14 C13 SING N N 24 
G9S C14 C15 SING N N 25 
G9S C11 C12 SING N N 26 
G9S C13 C12 SING N N 27 
G9S C15 C16 SING N N 28 
G9S C16 C21 SING N N 29 
G9S C21 C22 SING N N 30 
G9S C22 C23 SING N N 31 
G9S C24 C23 SING N N 32 
G9S C24 C25 SING N N 33 
G9S C26 C25 SING N N 34 
G9S C26 C27 SING N N 35 
G9S C28 C27 SING N N 36 
G9S C28 C29 SING N N 37 
G9S P1  O1  SING N N 38 
G9S C1  H1  SING N N 39 
G9S C1  H2  SING N N 40 
G9S C3  H3  SING N N 41 
G9S C3  H4  SING N N 42 
G9S C4  H5  SING N N 43 
G9S C4  H6  SING N N 44 
G9S C7  H7  SING N N 45 
G9S C7  H8  SING N N 46 
G9S C8  H9  SING N N 47 
G9S C8  H10 SING N N 48 
G9S C8  H11 SING N N 49 
G9S C11 H12 SING N N 50 
G9S C11 H13 SING N N 51 
G9S C12 H14 SING N N 52 
G9S C12 H15 SING N N 53 
G9S C13 H16 SING N N 54 
G9S C13 H17 SING N N 55 
G9S C14 H18 SING N N 56 
G9S C14 H19 SING N N 57 
G9S C15 H20 SING N N 58 
G9S C15 H21 SING N N 59 
G9S C16 H22 SING N N 60 
G9S C16 H23 SING N N 61 
G9S N2  H24 SING N N 62 
G9S C19 H25 SING N N 63 
G9S C19 H26 SING N N 64 
G9S C20 H27 SING N N 65 
G9S C20 H28 SING N N 66 
G9S C20 H29 SING N N 67 
G9S C21 H30 SING N N 68 
G9S C21 H31 SING N N 69 
G9S C22 H32 SING N N 70 
G9S C22 H33 SING N N 71 
G9S C23 H34 SING N N 72 
G9S C24 H35 SING N N 73 
G9S C25 H36 SING N N 74 
G9S C25 H37 SING N N 75 
G9S C26 H38 SING N N 76 
G9S C27 H39 SING N N 77 
G9S C28 H40 SING N N 78 
G9S C28 H41 SING N N 79 
G9S C29 H42 SING N N 80 
G9S C29 H43 SING N N 81 
G9S C29 H44 SING N N 82 
G9S C30 H45 SING N N 83 
G9S N3  H46 SING N N 84 
G9S O5  H47 SING N N 85 
G9S O8  H48 SING N N 86 
G9S O1  H49 SING N N 87 
G9S C23 H50 SING N N 88 
G9S C24 H51 SING N N 89 
G9S C26 H52 SING N N 90 
G9S C27 H53 SING N N 91 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
G9S SMILES           ACDLabs              12.01 "C(NC(CCNC(C(C(C)(COP(O)(=O)O)C)O)=O)=O)CSC(CCCCCCCCCCCCCCC)=O"                                                                                                                                      
G9S InChI            InChI                1.03  "InChI=1S/C27H53N2O8PS/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-24(31)39-21-20-28-23(30)18-19-29-26(33)25(32)27(2,3)22-37-38(34,35)36/h25,32H,4-22H2,1-3H3,(H,28,30)(H,29,33)(H2,34,35,36)/t25-/m1/s1" 
G9S InChIKey         InChI                1.03  JSWBEHRITPIXLC-RUZDIDTESA-N                                                                                                                                                                          
G9S SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@@H](O)C(C)(C)CO[P](O)(O)=O"                                                                                                                                 
G9S SMILES           CACTVS               3.385 "CCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O"                                                                                                                                   
G9S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](C(C)(C)COP(=O)(O)O)O"                                                                                                                                    
G9S SMILES           "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O"                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
G9S "SYSTEMATIC NAME" ACDLabs              12.01 "S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] hexadecanethioate"         
G9S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{S}-[2-[3-[[(2~{S})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] hexadecanethioate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
G9S "Create component" 2018-05-16 RCSB 
G9S "Initial release"  2019-04-03 RCSB 
G9S "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            G9S 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               P1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
