data_G6S
#

_chem_comp.id                                   G6S
_chem_comp.name                                 6-O-sulfo-beta-D-galactopyranose
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O9 S"
_chem_comp.mon_nstd_parent_comp_id              GAL
_chem_comp.pdbx_synonyms                        "D-GALACTOSE-6-SULFATE; 6-O-sulfo-beta-D-galactose; 6-O-sulfo-D-galactose; 6-O-sulfo-galactose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2001-01-25
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       260.219
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    G6S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1KES
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  G6S  D-GALACTOSE-6-SULFATE       PDB  ?  
2  G6S  6-O-sulfo-beta-D-galactose  PDB  ?  
3  G6S  6-O-sulfo-D-galactose       PDB  ?  
4  G6S  6-O-sulfo-galactose         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G6S  C1   C1   C  0  1  N  N  R   1.195   0.434   2.038  -2.069   1.427   0.208  C1   G6S   1  
G6S  C2   C2   C  0  1  N  N  R   1.152  -0.273   3.386  -3.120   0.373  -0.149  C2   G6S   2  
G6S  C3   C3   C  0  1  N  N  S   1.658   0.647   4.487  -2.782  -0.937   0.569  C3   G6S   3  
G6S  C4   C4   C  0  1  N  N  R   3.032   1.196   4.125  -1.367  -1.372   0.175  C4   G6S   4  
G6S  C5   C5   C  0  1  N  N  R   2.999   1.820   2.734  -0.383  -0.251   0.520  C5   G6S   5  
G6S  C6   C6   C  0  1  N  N  N   4.363   2.283   2.268   1.024  -0.653   0.075  C6   G6S   6  
G6S  O1   O1   O  0  1  N  Y  N   0.850  -0.481   1.052  -2.345   2.636  -0.502  O1   G6S   7  
G6S  O2   O2   O  0  1  N  N  N  -0.181  -0.694   3.653  -4.410   0.826   0.266  O2   G6S   8  
G6S  O4   O4   O  0  1  N  N  N   4.004   0.149   4.131  -1.321  -1.634  -1.229  O4   G6S   9  
G6S  O5   O5   O  0  1  N  N  N   2.532   0.862   1.772  -0.772   0.947  -0.156  O5   G6S  10  
G6S  O6   O6   O  0  1  N  N  N   4.305   2.887   0.977   1.960   0.340   0.499  O6   G6S  11  
G6S  S    S    S  0  1  N  N  N   5.696   3.414   0.386   3.400   0.041   0.108  S    G6S  12  
G6S  O7   O7   O  0  1  N  N  N   6.623   2.305   0.270   4.205   1.007   0.772  O7   G6S  13  
G6S  O8   O8   O  0  1  N  N  N   6.251   4.416   1.275   3.577  -1.360   0.268  O8   G6S  14  
G6S  O9   O9   O  0  1  N  N  N   5.476   3.998  -0.923   3.531   0.324  -1.381  O9   G6S  15  
G6S  O3   O3   O  0  1  N  N  N   1.737  -0.075   5.717  -3.717  -1.948   0.184  O3   G6S  16  
G6S  H1   H1   H  0  1  N  N  N   0.508   1.293   2.049  -2.097   1.620   1.280  H1   G6S  17  
G6S  H2   H2   H  0  1  N  N  N   1.809  -1.155   3.356  -3.120   0.209  -1.227  H2   G6S  18  
G6S  H3   H3   H  0  1  N  N  N   0.958   1.488   4.599  -2.831  -0.786   1.647  H3   G6S  19  
G6S  H4   H4   H  0  1  N  N  N   3.303   1.957   4.871  -1.097  -2.274   0.724  H4   G6S  20  
G6S  H5   H5   H  0  1  N  N  N   2.327   2.687   2.808  -0.389  -0.079   1.596  H5   G6S  21  
G6S  H61  H6   H  0  1  N  N  N   4.749   3.022   2.986   1.286  -1.612   0.521  H61  G6S  22  
G6S  H62  H6A  H  0  1  N  N  N   5.034   1.412   2.220   1.052  -0.737  -1.012  H62  G6S  23  
G6S  HO2  HO2  H  0  1  N  Y  N  -0.212  -1.136   4.494  -4.687   1.656  -0.146  HO2  G6S  24  
G6S  HO4  HO4  H  0  1  N  Y  N   4.855   0.505   3.904  -1.924  -2.332  -1.519  HO4  G6S  25  
G6S  HO3  HO3  H  0  1  N  Y  N   2.053   0.501   6.403  -4.636  -1.735   0.397  HO3  G6S  26  
G6S  HO1  HO1  H  0  1  N  Y  N   0.872  -0.056   0.203  -1.717   3.349  -0.324  HO1  G6S  27  
G6S  HO9  HO9  H  0  1  N  N  N   5.987   3.527  -1.570   4.416   0.165  -1.736  HO9  G6S  28  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G6S  C1  C2   SING  N  N   1  
G6S  C1  O1   SING  N  N   2  
G6S  C1  O5   SING  N  N   3  
G6S  C2  C3   SING  N  N   4  
G6S  C2  O2   SING  N  N   5  
G6S  C3  C4   SING  N  N   6  
G6S  C3  O3   SING  N  N   7  
G6S  C4  C5   SING  N  N   8  
G6S  C4  O4   SING  N  N   9  
G6S  C5  C6   SING  N  N  10  
G6S  C5  O5   SING  N  N  11  
G6S  C6  O6   SING  N  N  12  
G6S  O6  S    SING  N  N  13  
G6S  S   O7   DOUB  N  N  14  
G6S  S   O8   DOUB  N  N  15  
G6S  S   O9   SING  N  N  16  
G6S  C1  H1   SING  N  N  17  
G6S  C2  H2   SING  N  N  18  
G6S  C3  H3   SING  N  N  19  
G6S  C4  H4   SING  N  N  20  
G6S  C5  H5   SING  N  N  21  
G6S  C6  H61  SING  N  N  22  
G6S  C6  H62  SING  N  N  23  
G6S  O2  HO2  SING  N  N  24  
G6S  O4  HO4  SING  N  N  25  
G6S  O3  HO3  SING  N  N  26  
G6S  O1  HO1  SING  N  N  27  
G6S  O9  HO9  SING  N  N  28  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G6S  SMILES            ACDLabs               12.01  "O=S(=O)(O)OCC1OC(O)C(O)C(O)C1O"  
G6S  SMILES_CANONICAL  CACTVS                3.370  "O[C@@H]1O[C@H](CO[S](O)(=O)=O)[C@H](O)[C@H](O)[C@H]1O"  
G6S  SMILES            CACTVS                3.370  "O[CH]1O[CH](CO[S](O)(=O)=O)[CH](O)[CH](O)[CH]1O"  
G6S  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)OS(=O)(=O)O"  
G6S  SMILES            "OpenEye OEToolkits"  1.7.0  "C(C1C(C(C(C(O1)O)O)O)O)OS(=O)(=O)O"  
G6S  InChI             InChI                 1.03   "InChI=1S/C6H12O9S/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H,11,12,13)/t2-,3+,4+,5-,6-/m1/s1"  
G6S  InChIKey          InChI                 1.03   OKUVUONOJCDUJY-FPRJBGLDSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
G6S  "SYSTEMATIC NAME"                      ACDLabs               12.01  6-O-sulfo-beta-D-galactopyranose  
G6S  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.7.0  "[(2R,3R,4S,5R,6R)-3,4,5,6-tetrahydroxyoxan-2-yl]methyl hydrogen sulfate"  
G6S  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DGalp[6S]b  
G6S  "COMMON NAME"                          GMML                  1.0    6-sulfo-b-D-galactopyranose  
G6S  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    b-D-Galp6SO3  
#
_pdbx_chem_comp_related.comp_id            G6S
_pdbx_chem_comp_related.related_comp_id    GAL
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  G6S  C1   GAL  C1   "Carbohydrate core"  
 2  G6S  C2   GAL  C2   "Carbohydrate core"  
 3  G6S  C3   GAL  C3   "Carbohydrate core"  
 4  G6S  C4   GAL  C4   "Carbohydrate core"  
 5  G6S  C5   GAL  C5   "Carbohydrate core"  
 6  G6S  C6   GAL  C6   "Carbohydrate core"  
 7  G6S  O1   GAL  O1   "Carbohydrate core"  
 8  G6S  O2   GAL  O2   "Carbohydrate core"  
 9  G6S  O3   GAL  O3   "Carbohydrate core"  
10  G6S  O4   GAL  O4   "Carbohydrate core"  
11  G6S  O5   GAL  O5   "Carbohydrate core"  
12  G6S  O6   GAL  O6   "Carbohydrate core"  
13  G6S  H1   GAL  H1   "Carbohydrate core"  
14  G6S  H2   GAL  H2   "Carbohydrate core"  
15  G6S  H3   GAL  H3   "Carbohydrate core"  
16  G6S  H4   GAL  H4   "Carbohydrate core"  
17  G6S  H5   GAL  H5   "Carbohydrate core"  
18  G6S  H61  GAL  H61  "Carbohydrate core"  
19  G6S  H62  GAL  H62  "Carbohydrate core"  
20  G6S  HO1  GAL  HO1  "Carbohydrate core"  
21  G6S  HO2  GAL  HO2  "Carbohydrate core"  
22  G6S  HO3  GAL  HO3  "Carbohydrate core"  
23  G6S  HO4  GAL  HO4  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
G6S  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
G6S  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
G6S  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
G6S  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G6S  "Create component"          2001-01-25  RCSB  
G6S  "Modify descriptor"         2011-06-04  RCSB  
G6S  "Other modification"        2020-07-03  RCSB  
G6S  "Modify parent residue"     2020-07-17  RCSB  
G6S  "Modify name"               2020-07-17  RCSB  
G6S  "Modify synonyms"           2020-07-17  RCSB  
G6S  "Modify linking type"       2020-07-17  RCSB  
G6S  "Modify atom id"            2020-07-17  RCSB  
G6S  "Modify component atom id"  2020-07-17  RCSB  
G6S  "Modify leaving atom flag"  2020-07-17  RCSB  
##
