data_66S
# 
_chem_comp.id                                    66S 
_chem_comp.name                                  "S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] octanethioate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H37 N2 O8 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-02-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        484.544 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     66S 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5HV8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
66S P24  P1   P 0 1 N N N N N N -16.428 -9.213  1.805  -7.050 -2.730 0.451  P24  66S 1  
66S O26  O1   O 0 1 N N N N N N -16.339 -9.389  3.273  -5.906 -2.788 1.388  O26  66S 2  
66S O23  O2   O 0 1 N N N N N N -16.042 -10.459 1.110  -8.406 -2.461 1.276  O23  66S 3  
66S O27  O3   O 0 1 N N N N N N -17.877 -8.693  1.358  -6.819 -1.536 -0.605 O27  66S 4  
66S C28  C1   C 0 1 N N N N N N -18.534 -9.338  0.217  -6.570 -0.185 -0.211 C28  66S 5  
66S C29  C2   C 0 1 N N N N N N -19.635 -10.337 0.721  -6.398 0.686  -1.456 C29  66S 6  
66S C30  C3   C 0 1 N N N N N N -18.976 -11.482 1.500  -5.216 0.170  -2.280 C30  66S 7  
66S C31  C4   C 0 1 N N N N N N -20.364 -10.928 -0.491 -7.673 0.628  -2.300 C31  66S 8  
66S C32  C5   C 0 1 N N R N N N -20.680 -9.611  1.645  -6.131 2.132  -1.034 C32  66S 9  
66S O33  O4   O 0 1 N N N N N N -20.122 -9.420  2.948  -7.288 2.658  -0.380 O33  66S 10 
66S C34  C6   C 0 1 N N N N N N -21.092 -8.240  1.097  -4.959 2.172  -0.088 C34  66S 11 
66S O35  O5   O 0 1 N N N N N N -21.124 -7.963  -0.092 -5.128 2.467  1.076  O35  66S 12 
66S N36  N1   N 0 1 N N N N N N -21.422 -7.346  2.035  -3.722 1.880  -0.536 N36  66S 13 
66S C37  C7   C 0 1 N N N N N N -21.410 -5.902  1.784  -2.597 1.823  0.401  C37  66S 14 
66S C38  C8   C 0 1 N N N N N N -21.099 -5.103  3.061  -1.316 1.474  -0.360 C38  66S 15 
66S C39  C9   C 0 1 N N N N N N -20.124 -3.991  2.754  -0.160 1.416  0.605  C39  66S 16 
66S O40  O6   O 0 1 N N N N N N -20.397 -3.046  2.034  -0.342 1.633  1.784  O40  66S 17 
66S N41  N2   N 0 1 N N N N N N -18.927 -4.110  3.338  1.077  1.124  0.156  N41  66S 18 
66S C42  C10  C 0 1 N N N N N N -17.981 -5.177  2.988  2.202  1.067  1.094  C42  66S 19 
66S C43  C11  C 0 1 N N N N N N -16.533 -4.670  2.988  3.483  0.718  0.333  C43  66S 20 
66S S1   S1   S 0 1 N N N N N N -16.408 -2.976  3.633  4.872  0.649  1.492  S1   66S 21 
66S C1   C12  C 0 1 N N N N N N -15.965 -3.312  5.289  6.140  0.252  0.412  C1   66S 22 
66S O1   O7   O 0 1 N N N N N N -16.794 -3.465  6.162  5.907  0.110  -0.771 O1   66S 23 
66S C2   C13  C 0 1 N N N N N N -14.485 -3.393  5.537  7.544  0.080  0.929  C2   66S 24 
66S C3   C14  C 0 1 N N N N N N -14.089 -4.832  5.888  8.477  -0.269 -0.232 C3   66S 25 
66S C4   C15  C 0 1 N N N N N N -13.402 -4.884  7.266  9.903  -0.444 0.293  C4   66S 26 
66S C5   C16  C 0 1 N N N N N N -12.344 -5.997  7.278  10.836 -0.792 -0.868 C5   66S 27 
66S C6   C17  C 0 1 N N N N N N -10.929 -5.394  7.376  12.262 -0.967 -0.343 C6   66S 28 
66S C7   C18  C 0 1 N N N N N N -10.442 -4.930  5.993  13.195 -1.316 -1.505 C7   66S 29 
66S C8   C19  C 0 1 N N N N N N -10.396 -3.413  5.950  14.621 -1.491 -0.979 C8   66S 30 
66S H1   H1   H 0 1 N N N N N N -15.814 -11.122 1.751  -9.199 -2.411 0.724  H1   66S 31 
66S H28  H2   H 0 1 N N N N N N -19.002 -8.569  -0.415 -7.412 0.183  0.377  H28  66S 32 
66S H28A H3   H 0 0 N N N N N N -17.785 -9.889  -0.370 -5.662 -0.144 0.391  H28A 66S 33 
66S H30  H4   H 0 1 N N N N N N -19.750 -12.180 1.852  -5.454 -0.817 -2.676 H30  66S 34 
66S H30A H5   H 0 0 N N N N N N -18.273 -12.015 0.843  -5.022 0.855  -3.105 H30A 66S 35 
66S H30B H6   H 0 0 N N N N N N -18.432 -11.072 2.364  -4.332 0.104  -1.646 H30B 66S 36 
66S H31  H7   H 0 1 N N N N N N -21.138 -11.630 -0.147 -8.502 1.052  -1.735 H31  66S 37 
66S H31A H8   H 0 0 N N N N N N -20.834 -10.117 -1.067 -7.528 1.200  -3.217 H31A 66S 38 
66S H31B H9   H 0 0 N N N N N N -19.643 -11.461 -1.128 -7.896 -0.409 -2.550 H31B 66S 39 
66S H32  H10  H 0 1 N N N N N N -21.576 -10.245 1.710  -5.908 2.733  -1.915 H32  66S 40 
66S HO33 H11  H 0 0 N N N N N N -20.756 -8.981  3.503  -7.546 2.172  0.415  HO33 66S 41 
66S HN36 H12  H 0 0 N N N N N N -21.687 -7.675  2.941  -3.576 1.706  -1.480 HN36 66S 42 
66S H37  H13  H 0 1 N N N N N N -20.643 -5.678  1.028  -2.479 2.792  0.886  H37  66S 43 
66S H37A H14  H 0 0 N N N N N N -22.397 -5.598  1.405  -2.791 1.061  1.155  H37A 66S 44 
66S H38  H15  H 0 1 N N N N N N -22.031 -4.671  3.456  -1.434 0.505  -0.844 H38  66S 45 
66S H38A H16  H 0 0 N N N N N N -20.659 -5.775  3.812  -1.122 2.237  -1.114 H38A 66S 46 
66S HN41 H17  H 0 0 N N N N N N -18.666 -3.447  4.040  1.223  0.951  -0.787 HN41 66S 47 
66S H42  H18  H 0 1 N N N N N N -18.074 -5.991  3.721  2.320  2.036  1.579  H42  66S 48 
66S H42A H19  H 0 0 N N N N N N -18.226 -5.557  1.985  2.008  0.305  1.848  H42A 66S 49 
66S H43  H20  H 0 1 N N N N N N -15.923 -5.336  3.616  3.365  -0.251 -0.151 H43  66S 50 
66S H43A H21  H 0 0 N N N N N N -16.150 -4.687  1.957  3.677  1.481  -0.421 H43A 66S 51 
66S H2   H22  H 0 1 N N N N N N -13.946 -3.078  4.631  7.876  1.008  1.396  H2   66S 52 
66S H2A  H23  H 0 1 N N N N N N -14.219 -2.728  6.372  7.564  -0.724 1.665  H2A  66S 53 
66S H3   H24  H 0 1 N N N N N N -14.992 -5.460  5.910  8.145  -1.196 -0.699 H3   66S 54 
66S H3A  H25  H 0 1 N N N N N N -13.396 -5.213  5.124  8.457  0.535  -0.968 H3A  66S 55 
66S H4   H26  H 0 1 N N N N N N -12.918 -3.918  7.469  10.235 0.484  0.760  H4   66S 56 
66S H4A  H27  H 0 1 N N N N N N -14.155 -5.087  8.042  9.923  -1.247 1.029  H4A  66S 57 
66S H5   H28  H 0 1 N N N N N N -12.519 -6.653  8.143  10.504 -1.720 -1.335 H5   66S 58 
66S H5A  H29  H 0 1 N N N N N N -12.424 -6.583  6.351  10.816 0.012  -1.604 H5A  66S 59 
66S H6   H30  H 0 1 N N N N N N -10.950 -4.533  8.060  12.594 -0.039 0.123  H6   66S 60 
66S H6A  H31  H 0 1 N N N N N N -10.238 -6.155  7.766  12.282 -1.771 0.393  H6A  66S 61 
66S H7   H32  H 0 1 N N N N N N -9.435  -5.332  5.806  12.863 -2.244 -1.971 H7   66S 62 
66S H7A  H33  H 0 1 N N N N N N -11.133 -5.297  5.220  13.175 -0.512 -2.240 H7A  66S 63 
66S H8   H34  H 0 1 N N N N N N -10.047 -3.084  4.960  14.641 -2.295 -0.243 H8   66S 64 
66S H8A  H35  H 0 1 N N N N N N -11.402 -3.010  6.137  15.285 -1.739 -1.806 H8A  66S 65 
66S H8B  H36  H 0 1 N N N N N N -9.705  -3.045  6.723  14.952 -0.563 -0.512 H8B  66S 66 
66S OP3  OP3  O 0 1 N Y N N N N -15.557 -7.979  1.307  -7.170 -4.128 -0.338 OP3  66S 67 
66S HOP3 HOP3 H 0 0 N Y N N N N -15.130 -7.571  2.051  -7.310 -4.893 0.237  HOP3 66S 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
66S P24 O26  DOUB N N 1  
66S P24 O23  SING N N 2  
66S P24 O27  SING N N 3  
66S O27 C28  SING N N 4  
66S C28 C29  SING N N 5  
66S C29 C30  SING N N 6  
66S C29 C31  SING N N 7  
66S C29 C32  SING N N 8  
66S C32 O33  SING N N 9  
66S C32 C34  SING N N 10 
66S C34 O35  DOUB N N 11 
66S C34 N36  SING N N 12 
66S N36 C37  SING N N 13 
66S C37 C38  SING N N 14 
66S C38 C39  SING N N 15 
66S C39 O40  DOUB N N 16 
66S C39 N41  SING N N 17 
66S N41 C42  SING N N 18 
66S C42 C43  SING N N 19 
66S C43 S1   SING N N 20 
66S S1  C1   SING N N 21 
66S C1  O1   DOUB N N 22 
66S C1  C2   SING N N 23 
66S C2  C3   SING N N 24 
66S C3  C4   SING N N 25 
66S C4  C5   SING N N 26 
66S C5  C6   SING N N 27 
66S C6  C7   SING N N 28 
66S C7  C8   SING N N 29 
66S O23 H1   SING N N 30 
66S C28 H28  SING N N 31 
66S C28 H28A SING N N 32 
66S C30 H30  SING N N 33 
66S C30 H30A SING N N 34 
66S C30 H30B SING N N 35 
66S C31 H31  SING N N 36 
66S C31 H31A SING N N 37 
66S C31 H31B SING N N 38 
66S C32 H32  SING N N 39 
66S O33 HO33 SING N N 40 
66S N36 HN36 SING N N 41 
66S C37 H37  SING N N 42 
66S C37 H37A SING N N 43 
66S C38 H38  SING N N 44 
66S C38 H38A SING N N 45 
66S N41 HN41 SING N N 46 
66S C42 H42  SING N N 47 
66S C42 H42A SING N N 48 
66S C43 H43  SING N N 49 
66S C43 H43A SING N N 50 
66S C2  H2   SING N N 51 
66S C2  H2A  SING N N 52 
66S C3  H3   SING N N 53 
66S C3  H3A  SING N N 54 
66S C4  H4   SING N N 55 
66S C4  H4A  SING N N 56 
66S C5  H5   SING N N 57 
66S C5  H5A  SING N N 58 
66S C6  H6   SING N N 59 
66S C6  H6A  SING N N 60 
66S C7  H7   SING N N 61 
66S C7  H7A  SING N N 62 
66S C8  H8   SING N N 63 
66S C8  H8A  SING N N 64 
66S C8  H8B  SING N N 65 
66S P24 OP3  SING N N 66 
66S OP3 HOP3 SING N N 67 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
66S SMILES           ACDLabs              12.01 "P(=O)(O)(OCC(C)(C)C(O)C(=O)NCCC(=O)NCCSC(=O)CCCCCCC)O"                                                                                                                      
66S InChI            InChI                1.03  "InChI=1S/C19H37N2O8PS/c1-4-5-6-7-8-9-16(23)31-13-12-20-15(22)10-11-21-18(25)17(24)19(2,3)14-29-30(26,27)28/h17,24H,4-14H2,1-3H3,(H,20,22)(H,21,25)(H2,26,27,28)/t17-/m0/s1" 
66S InChIKey         InChI                1.03  JIQRMRIKUIPMRV-KRWDZBQOSA-N                                                                                                                                                  
66S SMILES_CANONICAL CACTVS               3.385 "CCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(O)=O"                                                                                                                  
66S SMILES           CACTVS               3.385 "CCCCCCCC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O"                                                                                                                   
66S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)O)O"                                                                                                                   
66S SMILES           "OpenEye OEToolkits" 2.0.4 "CCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O"                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
66S "SYSTEMATIC NAME" ACDLabs              12.01 "S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] octanethioate"         
66S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] octanethioate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
66S "Create component" 2016-02-08 EBI  
66S "Initial release"  2016-03-09 RCSB 
66S "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            66S 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               P24 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
