data_YGR
# 
_chem_comp.id                                    YGR 
_chem_comp.name                                  "(1R,2S)-1-(6-bromo-2-methoxyquinolin-3-yl)-2-(2,6-dimethoxypyridin-4-yl)-4-(dimethylamino)-1-(2,3,6-trimethoxypyridin-4-yl)butan-2-ol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H37 Br N4 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-01 
_chem_comp.pdbx_modified_date                    2023-02-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        657.552 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YGR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8G0B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YGR C01 C1  C  0 1 N N N 142.867 169.406 83.752 -1.040 -1.239 -4.578 C01 YGR 1  
YGR C03 C2  C  0 1 Y N N 141.911 170.454 81.824 -1.303 -0.611 -2.303 C03 YGR 2  
YGR C04 C3  C  0 1 Y N N 141.523 170.457 80.449 -0.782 -0.333 -1.033 C04 YGR 3  
YGR C05 C4  C  0 1 N N R 141.568 169.135 79.629 0.702  -0.434 -0.788 C05 YGR 4  
YGR C06 C5  C  0 1 Y N N 140.302 169.093 78.743 1.254  0.933  -0.477 C06 YGR 5  
YGR C07 C6  C  0 1 Y N N 139.063 168.805 79.346 2.231  1.505  -1.282 C07 YGR 6  
YGR C09 C7  C  0 1 N N N 139.212 167.241 81.138 2.029  1.047  -3.608 C09 YGR 7  
YGR C10 C8  C  0 1 Y N N 137.907 168.769 78.551 2.717  2.770  -0.964 C10 YGR 8  
YGR C12 C9  C  0 1 N N N 135.970 167.415 78.542 4.129  4.638  -1.364 C12 YGR 9  
YGR C14 C10 C  0 1 Y N N 139.111 169.275 76.641 1.320  2.909  0.871  C14 YGR 10 
YGR C16 C11 C  0 1 N N N 137.849 169.562 74.637 1.469  4.898  2.163  C16 YGR 11 
YGR C17 C12 C  0 1 Y N N 140.316 169.337 77.367 0.794  1.651  0.616  C17 YGR 12 
YGR C18 C13 C  0 1 N N S 142.886 169.056 78.875 0.960  -1.370 0.394  C18 YGR 13 
YGR C19 C14 C  0 1 N N N 144.025 168.911 79.926 0.547  -2.794 0.018  C19 YGR 14 
YGR C20 C15 C  0 1 N N N 145.415 168.506 79.327 -0.971 -2.853 -0.162 C20 YGR 15 
YGR C22 C16 C  0 1 N N N 147.756 168.529 79.761 -1.149 -5.037 0.870  C22 YGR 16 
YGR C23 C17 C  0 1 N N N 146.278 167.825 81.473 -2.796 -4.329 -0.758 C23 YGR 17 
YGR C25 C18 C  0 1 Y N N 142.922 167.857 77.908 2.427  -1.347 0.741  C25 YGR 18 
YGR C26 C19 C  0 1 Y N N 143.222 168.057 76.544 3.381  -1.107 -0.234 C26 YGR 19 
YGR C27 C20 C  0 1 Y N N 143.242 166.949 75.653 4.723  -1.087 0.121  C27 YGR 20 
YGR C29 C21 C  0 1 N N N 144.203 166.044 73.655 7.028  -0.847 -0.399 C29 YGR 21 
YGR C31 C22 C  0 1 Y N N 142.687 165.481 77.397 4.207  -1.533 2.329  C31 YGR 22 
YGR C33 C23 C  0 1 N N N 142.371 163.207 76.724 6.040  -1.700 3.830  C33 YGR 23 
YGR C34 C24 C  0 1 Y N N 142.646 166.545 78.346 2.849  -1.561 2.043  C34 YGR 24 
YGR C35 C25 C  0 1 Y N N 141.099 171.637 79.850 -1.618 0.031  -0.020 C35 YGR 25 
YGR C36 C26 C  0 1 Y N N 141.074 172.847 80.656 -2.999 0.114  -0.292 C36 YGR 26 
YGR C37 C27 C  0 1 Y N N 140.656 174.085 80.112 -3.916 0.482  0.704  C37 YGR 27 
YGR C38 C28 C  0 1 Y N N 140.641 175.232 80.914 -5.244 0.553  0.404  C38 YGR 28 
YGR C40 C29 C  0 1 Y N N 141.040 175.156 82.255 -5.702 0.263  -0.880 C40 YGR 29 
YGR C41 C30 C  0 1 Y N N 141.449 173.943 82.788 -4.839 -0.097 -1.869 C41 YGR 30 
YGR C42 C31 C  0 1 Y N N 141.464 172.770 81.966 -3.463 -0.181 -1.597 C42 YGR 31 
YGR N13 N1  N  0 1 Y N N 137.964 169.001 77.246 2.257  3.423  0.091  N13 YGR 32 
YGR N21 N2  N  0 1 N N N 146.463 168.739 80.338 -1.388 -4.250 -0.348 N21 YGR 33 
YGR N30 N3  N  0 1 Y N N 142.973 165.726 76.117 5.093  -1.295 1.375  N30 YGR 34 
YGR N43 N4  N  0 1 Y N N 141.878 171.580 82.529 -2.592 -0.527 -2.552 N43 YGR 35 
YGR O02 O1  O  0 1 N N N 142.345 169.246 82.429 -0.459 -0.971 -3.301 O02 YGR 36 
YGR O08 O2  O  0 1 N N N 138.971 168.566 80.735 2.707  0.837  -2.368 O08 YGR 37 
YGR O11 O3  O  0 1 N N N 136.663 168.484 79.147 3.672  3.338  -1.743 O11 YGR 38 
YGR O15 O4  O  0 1 N N N 139.129 169.517 75.240 0.878  3.616  1.943  O15 YGR 39 
YGR O24 O5  O  0 1 N N N 143.080 170.245 78.142 0.197  -0.935 1.522  O24 YGR 40 
YGR O28 O6  O  0 1 N N N 143.541 167.143 74.277 5.665  -0.853 -0.827 O28 YGR 41 
YGR O32 O7  O  0 1 N N N 142.410 164.142 77.806 4.630  -1.741 3.601  O32 YGR 42 
YGR BR3 BR1 BR 0 0 N N N 140.070 176.922 80.169 -6.479 1.048  1.747  BR3 YGR 43 
YGR H1  H1  H  0 1 N N N 143.178 168.427 84.145 -1.753 -2.058 -4.488 H1  YGR 44 
YGR H2  H2  H  0 1 N N N 143.734 170.083 83.725 -1.555 -0.347 -4.937 H2  YGR 45 
YGR H3  H3  H  0 1 N N N 142.090 169.832 84.404 -0.257 -1.515 -5.284 H3  YGR 46 
YGR H4  H4  H  0 1 N N N 141.520 168.294 80.336 1.191  -0.829 -1.678 H4  YGR 47 
YGR H5  H5  H  0 1 N N N 139.115 167.166 82.231 2.508  0.457  -4.389 H5  YGR 48 
YGR H6  H6  H  0 1 N N N 138.481 166.573 80.659 0.987  0.741  -3.509 H6  YGR 49 
YGR H7  H7  H  0 1 N N N 140.229 166.946 80.839 2.073  2.104  -3.871 H7  YGR 50 
YGR H8  H8  H  0 1 N N N 135.014 167.256 79.062 4.556  4.595  -0.362 H8  YGR 51 
YGR H9  H9  H  0 1 N N N 135.777 167.654 77.486 4.890  4.975  -2.069 H9  YGR 52 
YGR H10 H10 H  0 1 N N N 136.578 166.501 78.606 3.292  5.335  -1.372 H10 YGR 53 
YGR H11 H11 H  0 1 N N N 137.957 169.753 73.559 1.028  5.355  3.049  H11 YGR 54 
YGR H12 H12 H  0 1 N N N 137.338 168.600 74.790 2.543  4.783  2.310  H12 YGR 55 
YGR H13 H13 H  0 1 N N N 137.257 170.368 75.094 1.288  5.535  1.297  H13 YGR 56 
YGR H14 H14 H  0 1 N N N 141.243 169.571 76.865 0.029  1.239  1.257  H14 YGR 57 
YGR H15 H15 H  0 1 N N N 144.141 169.876 80.442 1.035  -3.079 -0.914 H15 YGR 58 
YGR H16 H16 H  0 1 N N N 143.726 168.141 80.652 0.846  -3.480 0.810  H16 YGR 59 
YGR H17 H17 H  0 1 N N N 145.401 167.442 79.050 -1.458 -2.443 0.722  H17 YGR 60 
YGR H18 H18 H  0 1 N N N 145.623 169.114 78.434 -1.256 -2.270 -1.038 H18 YGR 61 
YGR H19 H19 H  0 1 N N N 148.531 168.705 80.522 -1.717 -4.609 1.696  H19 YGR 62 
YGR H20 H20 H  0 1 N N N 147.830 167.494 79.395 -1.466 -6.066 0.705  H20 YGR 63 
YGR H21 H21 H  0 1 N N N 147.901 169.226 78.923 -0.086 -5.018 1.112  H21 YGR 64 
YGR H22 H22 H  0 1 N N N 147.063 168.006 82.222 -2.931 -3.796 -1.699 H22 YGR 65 
YGR H23 H23 H  0 1 N N N 145.292 168.000 81.927 -3.078 -5.374 -0.888 H23 YGR 66 
YGR H24 H24 H  0 1 N N N 146.340 166.785 81.120 -3.424 -3.876 0.009  H24 YGR 67 
YGR H25 H25 H  0 1 N N N 143.436 169.050 76.177 3.085  -0.937 -1.258 H25 YGR 68 
YGR H26 H26 H  0 1 N N N 144.394 166.281 72.598 7.676  -0.648 -1.253 H26 YGR 69 
YGR H27 H27 H  0 1 N N N 145.158 165.855 74.166 7.169  -0.070 0.352  H27 YGR 70 
YGR H28 H28 H  0 1 N N N 143.568 165.148 73.721 7.279  -1.817 0.030  H28 YGR 71 
YGR H29 H29 H  0 1 N N N 142.154 162.202 77.115 6.242  -1.881 4.886  H29 YGR 72 
YGR H30 H30 H  0 1 N N N 141.585 163.502 76.013 6.529  -2.467 3.230  H30 YGR 73 
YGR H31 H31 H  0 1 N N N 143.344 163.198 76.212 6.426  -0.720 3.550  H31 YGR 74 
YGR H32 H32 H  0 1 N N N 142.408 166.350 79.381 2.130  -1.747 2.828  H32 YGR 75 
YGR H33 H33 H  0 1 N N N 140.796 171.655 78.813 -1.233 0.249  0.965  H33 YGR 76 
YGR H34 H34 H  0 1 N N N 140.349 174.145 79.078 -3.572 0.709  1.702  H34 YGR 77 
YGR H35 H35 H  0 1 N N N 141.029 176.042 82.873 -6.759 0.325  -1.093 H35 YGR 78 
YGR H36 H36 H  0 1 N N N 141.756 173.883 83.822 -5.210 -0.319 -2.858 H36 YGR 79 
YGR H38 H38 H  0 1 N N N 143.059 170.989 78.733 0.529  -0.124 1.932  H38 YGR 80 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YGR C29 O28 SING N N 1  
YGR O28 C27 SING N N 2  
YGR C16 O15 SING N N 3  
YGR O15 C14 SING N N 4  
YGR C27 N30 DOUB Y N 5  
YGR C27 C26 SING Y N 6  
YGR N30 C31 SING Y N 7  
YGR C26 C25 DOUB Y N 8  
YGR C14 N13 DOUB Y N 9  
YGR C14 C17 SING Y N 10 
YGR C33 O32 SING N N 11 
YGR N13 C10 SING Y N 12 
YGR C17 C06 DOUB Y N 13 
YGR C31 O32 SING N N 14 
YGR C31 C34 DOUB Y N 15 
YGR C25 C34 SING Y N 16 
YGR C25 C18 SING N N 17 
YGR O24 C18 SING N N 18 
YGR C12 O11 SING N N 19 
YGR C10 O11 SING N N 20 
YGR C10 C07 DOUB Y N 21 
YGR C06 C07 SING Y N 22 
YGR C06 C05 SING N N 23 
YGR C18 C05 SING N N 24 
YGR C18 C19 SING N N 25 
YGR C20 C19 SING N N 26 
YGR C20 N21 SING N N 27 
YGR C07 O08 SING N N 28 
YGR C05 C04 SING N N 29 
YGR C22 N21 SING N N 30 
YGR C35 C04 DOUB Y N 31 
YGR C35 C36 SING Y N 32 
YGR C37 C36 DOUB Y N 33 
YGR C37 C38 SING Y N 34 
YGR BR3 C38 SING N N 35 
YGR N21 C23 SING N N 36 
YGR C04 C03 SING Y N 37 
YGR C36 C42 SING Y N 38 
YGR O08 C09 SING N N 39 
YGR C38 C40 DOUB Y N 40 
YGR C03 O02 SING N N 41 
YGR C03 N43 DOUB Y N 42 
YGR C42 N43 SING Y N 43 
YGR C42 C41 DOUB Y N 44 
YGR C40 C41 SING Y N 45 
YGR O02 C01 SING N N 46 
YGR C01 H1  SING N N 47 
YGR C01 H2  SING N N 48 
YGR C01 H3  SING N N 49 
YGR C05 H4  SING N N 50 
YGR C09 H5  SING N N 51 
YGR C09 H6  SING N N 52 
YGR C09 H7  SING N N 53 
YGR C12 H8  SING N N 54 
YGR C12 H9  SING N N 55 
YGR C12 H10 SING N N 56 
YGR C16 H11 SING N N 57 
YGR C16 H12 SING N N 58 
YGR C16 H13 SING N N 59 
YGR C17 H14 SING N N 60 
YGR C19 H15 SING N N 61 
YGR C19 H16 SING N N 62 
YGR C20 H17 SING N N 63 
YGR C20 H18 SING N N 64 
YGR C22 H19 SING N N 65 
YGR C22 H20 SING N N 66 
YGR C22 H21 SING N N 67 
YGR C23 H22 SING N N 68 
YGR C23 H23 SING N N 69 
YGR C23 H24 SING N N 70 
YGR C26 H25 SING N N 71 
YGR C29 H26 SING N N 72 
YGR C29 H27 SING N N 73 
YGR C29 H28 SING N N 74 
YGR C33 H29 SING N N 75 
YGR C33 H30 SING N N 76 
YGR C33 H31 SING N N 77 
YGR C34 H32 SING N N 78 
YGR C35 H33 SING N N 79 
YGR C37 H34 SING N N 80 
YGR C40 H35 SING N N 81 
YGR C41 H36 SING N N 82 
YGR O24 H38 SING N N 83 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YGR SMILES           ACDLabs              12.01 "COc1nc(cc(c1OC)C(c1cc2cc(Br)ccc2nc1OC)C(O)(CCN(C)C)c1cc(OC)nc(OC)c1)OC"                                                                                                                                     
YGR InChI            InChI                1.06  "InChI=1S/C31H37BrN4O7/c1-36(2)12-11-31(37,19-15-24(38-3)34-25(16-19)39-4)27(21-17-26(40-5)35-30(43-8)28(21)41-6)22-14-18-13-20(32)9-10-23(18)33-29(22)42-7/h9-10,13-17,27,37H,11-12H2,1-8H3/t27-,31-/m1/s1" 
YGR InChIKey         InChI                1.06  HHDDKDPLFXIPBX-DLFZDVPBSA-N                                                                                                                                                                                  
YGR SMILES_CANONICAL CACTVS               3.385 "COc1cc(cc(OC)n1)[C@](O)(CCN(C)C)[C@@H](c2cc3cc(Br)ccc3nc2OC)c4cc(OC)nc(OC)c4OC"                                                                                                                             
YGR SMILES           CACTVS               3.385 "COc1cc(cc(OC)n1)[C](O)(CCN(C)C)[CH](c2cc3cc(Br)ccc3nc2OC)c4cc(OC)nc(OC)c4OC"                                                                                                                                
YGR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)CC[C@@](c1cc(nc(c1)OC)OC)([C@@H](c2cc3cc(ccc3nc2OC)Br)c4cc(nc(c4OC)OC)OC)O"                                                                                                                            
YGR SMILES           "OpenEye OEToolkits" 2.0.7 "CN(C)CCC(c1cc(nc(c1)OC)OC)(C(c2cc3cc(ccc3nc2OC)Br)c4cc(nc(c4OC)OC)OC)O"                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YGR "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2S)-1-(6-bromo-2-methoxyquinolin-3-yl)-2-(2,6-dimethoxypyridin-4-yl)-4-(dimethylamino)-1-(2,3,6-trimethoxypyridin-4-yl)butan-2-ol"           
YGR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-1-(6-bromanyl-2-methoxy-quinolin-3-yl)-2-(2,6-dimethoxypyridin-4-yl)-4-(dimethylamino)-1-(2,3,6-trimethoxypyridin-4-yl)butan-2-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YGR "Create component" 2023-02-01 RCSB 
YGR "Initial release"  2023-02-15 RCSB 
# 
