data_UZR
# 
_chem_comp.id                                    UZR 
_chem_comp.name                                  "2'-deoxy-2'-triaza-1,2-dien-2-ium-1-yl-uridine-5'-monophosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H13 N5 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               U 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2011-06-08 
_chem_comp.pdbx_modified_date                    2012-04-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        350.202 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UZR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3S7C 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UZR P      P      P 0 1 N N N 20.290 10.217 -6.676  4.483  -0.849 0.122  P      UZR 1  
UZR N1     N1     N 0 1 N N N 17.488 4.567  -5.694  -2.089 -0.700 -0.261 N1     UZR 2  
UZR C2     C2     C 0 1 N N N 16.945 3.354  -5.346  -3.182 -0.968 -0.997 C2     UZR 3  
UZR O2     O2     O 0 1 N N N 16.481 2.625  -6.226  -3.390 -0.335 -2.014 O2     UZR 4  
UZR N3     N3     N 0 1 N N N 16.829 3.092  -3.986  -4.050 -1.927 -0.624 N3     UZR 5  
UZR C4     C4     C 0 1 N N N 17.242 3.897  -3.024  -3.834 -2.638 0.501  C4     UZR 6  
UZR O4     O4     O 0 1 N N N 17.195 3.483  -1.785  -4.618 -3.507 0.840  O4     UZR 7  
UZR C5     C5     C 0 1 N N N 17.753 5.127  -3.386  -2.686 -2.367 1.285  C5     UZR 8  
UZR C6     C6     C 0 1 N N N 17.866 5.444  -4.704  -1.833 -1.399 0.887  C6     UZR 9  
UZR "C1'"  "C1'"  C 0 1 N N R 17.754 4.828  -7.097  -1.159 0.345  -0.696 "C1'"  UZR 10 
UZR "C2'"  "C2'"  C 0 1 N N R 16.600 5.247  -7.899  -1.141 1.516  0.319  "C2'"  UZR 11 
UZR "C3'"  "C3'"  C 0 1 N N S 16.730 6.752  -7.862  0.254  2.140  0.070  "C3'"  UZR 12 
UZR "N3'"  "N3'"  N 0 1 N N N 16.778 4.847  -9.350  -2.205 2.480  0.024  "N3'"  UZR 13 
UZR "O3'"  "O3'"  O 0 1 N N N 16.052 7.498  -8.809  0.149  3.269  -0.799 "O3'"  UZR 14 
UZR "C4'"  "C4'"  C 0 1 N N R 18.216 6.913  -7.997  1.057  1.011  -0.605 "C4'"  UZR 15 
UZR "N4'"  "N4'"  N 1 1 N N N 16.346 3.721  -9.653  -2.385 3.348  0.716  "N4'"  UZR 16 
UZR "O4'"  "O4'"  O 0 1 N N N 18.762 5.829  -7.208  0.200  -0.141 -0.674 "O4'"  UZR 17 
UZR "C5'"  "C5'"  C 0 1 N N N 18.517 8.252  -7.382  2.299  0.687  0.227  "C5'"  UZR 18 
UZR "N5'"  "N5'"  N 0 1 N N N 15.979 2.684  -10.036 -2.565 4.215  1.408  "N5'"  UZR 19 
UZR "O5'"  "O5'"  O 0 1 N N N 19.741 9.016  -7.570  3.097  -0.276 -0.464 "O5'"  UZR 20 
UZR H3     H3     H 0 1 N N N 16.401 2.230  -3.716  -4.834 -2.107 -1.166 H3     UZR 21 
UZR H5     H5     H 0 1 N N N 18.061 5.833  -2.628  -2.497 -2.926 2.189  H5     UZR 22 
UZR H6     H6     H 0 1 N N N 18.263 6.410  -4.980  -0.952 -1.179 1.472  H6     UZR 23 
UZR "H1'"  H1*    H 0 1 N N N 18.069 3.857  -7.507  -1.425 0.703  -1.691 "H1'"  UZR 24 
UZR "H2'"  H2*    H 0 1 N N N 15.655 4.821  -7.531  -1.226 1.147  1.341  "H2'"  UZR 25 
UZR "H3'"  H3*    H 0 1 N N N 16.258 7.150  -6.951  0.717  2.428  1.014  "H3'"  UZR 26 
UZR "HO3'" H3T    H 0 0 N N N 16.223 8.422  -8.667  0.994  3.698  -0.989 "HO3'" UZR 27 
UZR "H4'"  H4*    H 0 1 N N N 18.620 6.879  -9.019  1.350  1.315  -1.610 "H4'"  UZR 28 
UZR "H5'"  1H5*   H 0 1 N N N 17.722 8.912  -7.760  2.880  1.596  0.382  "H5'"  UZR 29 
UZR "H5''" 2H5*   H 0 0 N N N 18.471 8.071  -6.298  1.995  0.282  1.192  "H5''" UZR 30 
UZR "HN5'" "HN5'" H 0 0 N N N 16.199 2.542  -11.001 -3.185 4.125  2.147  "HN5'" UZR 31 
UZR OP1    O1P    O 0 1 N N N 20.132 9.872  -5.224  4.254  -1.410 1.472  O1P    UZR 32 
UZR OP2    O2P    O 0 1 N N N 21.807 10.455 -6.995  5.040  -2.004 -0.852 O2P    UZR 33 
UZR OP3    O3P    O 0 1 N Y N 19.399 11.646 -7.026  5.561  0.343  0.212  O3P    UZR 34 
UZR HOP2   2HOP   H 0 0 N N N 22.320 10.333 -6.205  5.875  -2.396 -0.560 HOP2   UZR 35 
UZR HOP3   3HOP   H 0 0 N Y N 18.971 11.954 -6.236  5.760  0.758  -0.638 HOP3   UZR 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UZR P     "O5'"  SING N N 1  
UZR N1    C2     SING N N 2  
UZR N1    C6     SING N N 3  
UZR N1    "C1'"  SING N N 4  
UZR C2    O2     DOUB N N 5  
UZR C2    N3     SING N N 6  
UZR N3    C4     SING N N 7  
UZR N3    H3     SING N N 8  
UZR C4    O4     DOUB N N 9  
UZR C4    C5     SING N N 10 
UZR C5    C6     DOUB N N 11 
UZR C5    H5     SING N N 12 
UZR C6    H6     SING N N 13 
UZR "C1'" "C2'"  SING N N 14 
UZR "C1'" "O4'"  SING N N 15 
UZR "C1'" "H1'"  SING N N 16 
UZR "C2'" "C3'"  SING N N 17 
UZR "C2'" "N3'"  SING N N 18 
UZR "C2'" "H2'"  SING N N 19 
UZR "C3'" "O3'"  SING N N 20 
UZR "C3'" "C4'"  SING N N 21 
UZR "C3'" "H3'"  SING N N 22 
UZR "N3'" "N4'"  DOUB N N 23 
UZR "O3'" "HO3'" SING N N 24 
UZR "C4'" "O4'"  SING N N 25 
UZR "C4'" "C5'"  SING N N 26 
UZR "C4'" "H4'"  SING N N 27 
UZR "N4'" "N5'"  DOUB N N 28 
UZR "C5'" "O5'"  SING N N 29 
UZR "C5'" "H5'"  SING N N 30 
UZR "C5'" "H5''" SING N N 31 
UZR "N5'" "HN5'" SING N N 32 
UZR P     OP1    DOUB N N 33 
UZR P     OP2    SING N N 34 
UZR P     OP3    SING N N 35 
UZR OP2   HOP2   SING N N 36 
UZR OP3   HOP3   SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UZR SMILES           ACDLabs              12.01 "O=P(O)(O)OCC2OC(N1C(=O)NC(=O)C=C1)C(\N=[N+]=[N@H])C2O"                                                                                                      
UZR InChI            InChI                1.03  "InChI=1S/C9H12N5O8P/c10-13-12-6-7(16)4(3-21-23(18,19)20)22-8(6)14-2-1-5(15)11-9(14)17/h1-2,4,6-8,10,16H,3H2,(H2-,11,15,17,18,19,20)/p+1/t4-,6-,7-,8-/m1/s1" 
UZR InChIKey         InChI                1.03  FKBDCNLBVFTTRL-XVFCMESISA-O                                                                                                                                  
UZR SMILES_CANONICAL CACTVS               3.370 "O[C@@H]1[C@@H](CO[P](O)(O)=O)O[C@H]([C@@H]1N=[N+]=N)N2C=CC(=O)NC2=O"                                                                                        
UZR SMILES           CACTVS               3.370 "O[CH]1[CH](CO[P](O)(O)=O)O[CH]([CH]1N=[N+]=N)N2C=CC(=O)NC2=O"                                                                                               
UZR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)N=[N+]=N"                                                                                       
UZR SMILES           "OpenEye OEToolkits" 1.7.2 "C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)O)O)N=[N+]=N"                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UZR "SYSTEMATIC NAME" ACDLabs              12.01 
;2'-deoxy-2'-triaza-1,2-dien-2-ium-1-yluridine 5'-(dihydrogen phosphate)
;
UZR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "azanylidene-[(2R,3R,4S,5R)-2-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-4-oxidanyl-5-(phosphonooxymethyl)oxolan-3-yl]imino-azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UZR "Create component" 2011-06-08 RCSB 
UZR "Modify atom id"   2011-06-08 RCSB 
# 
