data_TNR
#

_chem_comp.id                                   TNR
_chem_comp.name                                 "O-(2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOSYL)-L-SERINE"
_chem_comp.type                                 "L-PEPTIDE LINKING"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C11 H20 N2 O8"
_chem_comp.mon_nstd_parent_comp_id              SER
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2002-11-15
_chem_comp.pdbx_modified_date                   2020-07-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       308.285
_chem_comp.one_letter_code                      S
_chem_comp.three_letter_code                    TNR
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1N47
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TNR  OXT   OB    O  0  1  N  Y  N  -29.699  58.395  -34.274  -0.172   0.174   4.855  OXT   TNR   1  
TNR  C     C     C  0  1  N  N  N  -30.886  58.706  -34.288   0.944   0.103   4.113  C     TNR   2  
TNR  O     OA    O  0  1  N  N  N  -31.212  59.836  -33.943   1.918  -0.470   4.541  O     TNR   3  
TNR  CA    CA    C  0  1  N  N  S  -31.950  57.696  -34.757   0.983   0.739   2.747  CA    TNR   4  
TNR  N     N     N  0  1  N  N  N  -31.365  56.641  -35.585   2.354   1.171   2.448  N     TNR   5  
TNR  CB    CB    C  0  1  N  N  N  -32.698  57.075  -33.570   0.528  -0.277   1.699  CB    TNR   6  
TNR  O1    O1    O  0  1  N  N  N  -31.815  56.773  -32.498   0.565   0.325   0.403  O1    TNR   7  
TNR  C1    C1    C  0  1  N  N  S  -32.295  56.885  -31.156   0.132  -0.669  -0.526  C1    TNR   8  
TNR  C2    C2    C  0  1  N  N  R  -31.124  57.227  -30.251   0.156  -0.081  -1.939  C2    TNR   9  
TNR  N2    N2    N  0  1  N  N  N  -30.597  58.478  -30.723   1.523   0.317  -2.281  N2    TNR  10  
TNR  C7    C7    C  0  1  N  N  N  -30.360  59.458  -29.869   2.352  -0.560  -2.880  C7    TNR  11  
TNR  C8    C8    C  0  1  N  N  N  -29.849  60.748  -30.450   3.759  -0.149  -3.231  C8    TNR  12  
TNR  O7    O7    O  0  1  N  N  N  -30.553  59.297  -28.681   1.966  -1.681  -3.136  O7    TNR  13  
TNR  C3    C3    C  0  1  N  N  R  -30.094  56.131  -30.327  -0.763   1.143  -1.989  C3    TNR  14  
TNR  O3    O3    O  0  1  N  N  N  -29.041  56.449  -29.426  -0.866   1.611  -3.335  O3    TNR  15  
TNR  C4    C4    C  0  1  N  N  R  -30.752  54.857  -29.858  -2.149   0.737  -1.474  C4    TNR  16  
TNR  O4    O4    O  0  1  N  N  N  -31.141  55.062  -28.502  -2.741  -0.195  -2.380  O4    TNR  17  
TNR  C5    C5    C  0  1  N  N  R  -31.997  54.555  -30.681  -1.999   0.090  -0.095  C5    TNR  18  
TNR  O5    O5    O  0  1  N  N  N  -32.906  55.664  -30.758  -1.192  -1.081  -0.197  O5    TNR  19  
TNR  C6    C6    C  0  1  N  N  N  -32.735  53.396  -30.038  -3.380  -0.289   0.440  C6    TNR  20  
TNR  O6    O6    O  0  1  N  N  N  -33.536  52.763  -31.038  -3.242  -0.893   1.728  O6    TNR  21  
TNR  HB    HB    H  0  1  N  N  N  -29.446  57.519  -34.541  -0.197  -0.233   5.731  HB    TNR  22  
TNR  HCA   HCA   H  0  1  N  N  N  -32.680  58.265  -35.377   0.318   1.602   2.729  HCA   TNR  23  
TNR  H     1HN   H  0  1  N  N  N  -32.069  55.972  -35.895   2.932   0.344   2.475  H     TNR  24  
TNR  H2    2HN   H  0  1  N  Y  N  -30.595  56.174  -35.104   2.355   1.493   1.491  H2    TNR  25  
TNR  HB2   1HCB  H  0  1  N  N  N  -33.540  57.723  -33.234  -0.489  -0.598   1.921  HB2   TNR  26  
TNR  HB3   2HCB  H  0  1  N  N  N  -33.283  56.178  -33.880   1.193  -1.140   1.717  HB3   TNR  27  
TNR  HC1   HC1   H  0  1  N  N  N  -33.061  57.691  -31.084   0.801  -1.527  -0.477  HC1   TNR  28  
TNR  HC2   HC2   H  0  1  N  N  N  -31.430  57.317  -29.182  -0.193  -0.829  -2.651  HC2   TNR  29  
TNR  HN2   HN2   H  0  1  N  N  N  -30.383  58.677  -31.700   1.832   1.214  -2.076  HN2   TNR  30  
TNR  HC81  1HC8  H  0  0  N  N  N  -29.649  61.575  -29.729   4.274  -0.985  -3.705  HC81  TNR  31  
TNR  HC82  2HC8  H  0  0  N  N  N  -28.934  60.549  -31.055   3.729   0.695  -3.919  HC82  TNR  32  
TNR  HC83  3HC8  H  0  0  N  N  N  -30.546  61.103  -31.244   4.291   0.138  -2.324  HC83  TNR  33  
TNR  HC3   HC3   H  0  1  N  N  N  -29.698  56.019  -31.363  -0.355   1.932  -1.357  HC3   TNR  34  
TNR  HO3   HO3   H  0  1  N  N  N  -28.391  55.757  -29.473  -1.452   2.380  -3.319  HO3   TNR  35  
TNR  HC4   HC4   H  0  1  N  N  N  -30.044  54.002  -29.966  -2.782   1.621  -1.395  HC4   TNR  36  
TNR  HO4   HO4   H  0  1  N  N  N  -31.555  54.259  -28.206  -3.609  -0.423  -2.019  HO4   TNR  37  
TNR  HC5   HC5   H  0  1  N  N  N  -31.654  54.320  -31.715  -1.527   0.797   0.586  HC5   TNR  38  
TNR  HC61  1HC6  H  0  0  N  N  N  -32.049  52.683  -29.523  -3.996   0.606   0.524  HC61  TNR  39  
TNR  HC62  2HC6  H  0  0  N  N  N  -33.328  53.706  -29.146  -3.854  -0.993  -0.242  HC62  TNR  40  
TNR  HO6   HO6   H  0  1  N  N  N  -33.998  52.037  -30.635  -4.133  -1.116   2.029  HO6   TNR  41  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TNR  OXT  C     SING  N  N   1  
TNR  OXT  HB    SING  N  N   2  
TNR  C    O     DOUB  N  N   3  
TNR  C    CA    SING  N  N   4  
TNR  CA   N     SING  N  N   5  
TNR  CA   CB    SING  N  N   6  
TNR  CA   HCA   SING  N  N   7  
TNR  N    H     SING  N  N   8  
TNR  N    H2    SING  N  N   9  
TNR  CB   O1    SING  N  N  10  
TNR  CB   HB2   SING  N  N  11  
TNR  CB   HB3   SING  N  N  12  
TNR  O1   C1    SING  N  N  13  
TNR  C1   C2    SING  N  N  14  
TNR  C1   O5    SING  N  N  15  
TNR  C1   HC1   SING  N  N  16  
TNR  C2   N2    SING  N  N  17  
TNR  C2   C3    SING  N  N  18  
TNR  C2   HC2   SING  N  N  19  
TNR  N2   C7    SING  N  N  20  
TNR  N2   HN2   SING  N  N  21  
TNR  C7   C8    SING  N  N  22  
TNR  C7   O7    DOUB  N  N  23  
TNR  C8   HC81  SING  N  N  24  
TNR  C8   HC82  SING  N  N  25  
TNR  C8   HC83  SING  N  N  26  
TNR  C3   O3    SING  N  N  27  
TNR  C3   C4    SING  N  N  28  
TNR  C3   HC3   SING  N  N  29  
TNR  O3   HO3   SING  N  N  30  
TNR  C4   O4    SING  N  N  31  
TNR  C4   C5    SING  N  N  32  
TNR  C4   HC4   SING  N  N  33  
TNR  O4   HO4   SING  N  N  34  
TNR  C5   O5    SING  N  N  35  
TNR  C5   C6    SING  N  N  36  
TNR  C5   HC5   SING  N  N  37  
TNR  C6   O6    SING  N  N  38  
TNR  C6   HC61  SING  N  N  39  
TNR  C6   HC62  SING  N  N  40  
TNR  O6   HO6   SING  N  N  41  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TNR  SMILES            ACDLabs               10.04  "O=C(O)C(N)COC1OC(C(O)C(O)C1NC(=O)C)CO"  
TNR  SMILES_CANONICAL  CACTVS                3.341  "CC(=O)N[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@@H]1OC[C@H](N)C(O)=O"  
TNR  SMILES            CACTVS                3.341  "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1OC[CH](N)C(O)=O"  
TNR  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1OC[C@@H](C(=O)O)N)CO)O)O"  
TNR  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(=O)NC1C(C(C(OC1OCC(C(=O)O)N)CO)O)O"  
TNR  InChI             InChI                 1.03   "InChI=1S/C11H20N2O8/c1-4(15)13-7-9(17)8(16)6(2-14)21-11(7)20-3-5(12)10(18)19/h5-9,11,14,16-17H,2-3,12H2,1H3,(H,13,15)(H,18,19)/t5-,6+,7+,8-,9+,11-/m0/s1"  
TNR  InChIKey          InChI                 1.03   REDMNGDGDYFZRE-WKWISIMFSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TNR  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2S)-3-{[(2S,3R,4R,5R,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-2-aminopropanoic acid (non-preferred name)"  
TNR  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S)-3-[(2S,3R,4R,5R,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-amino-propanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TNR  "Create component"    2002-11-15  EBI   
TNR  "Modify descriptor"   2011-06-04  RCSB  
TNR  "Obsolete component"  2020-07-03  RCSB  
##
