data_SQR
# 
_chem_comp.id                                    SQR 
_chem_comp.name                                  "[(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H28 N2 O16 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-19 
_chem_comp.pdbx_modified_date                    2023-02-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        584.505 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SQR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BZ3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SQR C15 C1  C 0 1 N N S 20.413 -8.847  -1.134 2.483  0.333  0.013  C15 SQR 1  
SQR C17 C2  C 0 1 N N S 22.574 -9.754  -0.842 0.160  0.823  -0.316 C17 SQR 2  
SQR C22 C3  C 0 1 N N S 25.241 -10.958 -0.847 -2.721 0.850  -0.465 C22 SQR 3  
SQR C24 C4  C 0 1 Y N N 27.357 -11.535 -1.543 -4.854 0.046  0.209  C24 SQR 4  
SQR C26 C5  C 0 1 Y N N 27.663 -13.322 -3.109 -5.380 -2.244 -0.266 C26 SQR 5  
SQR C02 C6  C 0 1 N N S 18.345 -6.908  -0.617 5.147  1.002  0.898  C02 SQR 6  
SQR C03 C7  C 0 1 N N S 18.049 -8.076  -1.475 4.861  -0.374 0.287  C03 SQR 7  
SQR C09 C8  C 0 1 N N R 18.927 -9.229  -1.195 3.703  -0.248 -0.707 C09 SQR 8  
SQR C11 C9  C 0 1 N N R 19.844 -6.571  -0.666 3.872  1.534  1.556  C11 SQR 9  
SQR C12 C10 C 0 1 N N N 20.194 -5.432  0.240  4.133  2.933  2.117  C12 SQR 10 
SQR C18 C11 C 0 1 N N R 23.103 -10.575 -2.023 -0.709 -0.436 -0.250 C18 SQR 11 
SQR C19 C12 C 0 1 N N N 22.607 -10.086 -3.342 -0.026 -1.481 0.635  C19 SQR 12 
SQR C25 C13 C 0 1 Y N N 26.836 -12.408 -2.486 -4.497 -1.184 -0.324 C25 SQR 13 
SQR C27 C14 C 0 1 Y N N 29.008 -13.354 -2.789 -6.620 -2.081 0.324  C27 SQR 14 
SQR C31 C15 C 0 1 Y N N 29.535 -12.483 -1.855 -6.982 -0.855 0.851  C31 SQR 15 
SQR C32 C16 C 0 1 Y N N 28.706 -11.569 -1.232 -6.099 0.207  0.800  C32 SQR 16 
SQR C33 C17 C 0 1 N N R 24.673 -10.259 0.388  -1.934 2.161  -0.539 C33 SQR 17 
SQR C35 C18 C 0 1 N N N 26.352 -10.468 2.282  -3.629 3.886  -0.835 C35 SQR 18 
SQR C36 C19 C 0 1 N N N 26.891 -11.209 3.506  -4.375 4.874  -1.693 C36 SQR 19 
SQR C38 C20 C 0 1 N N R 23.193 -10.245 0.423  -0.557 1.886  -1.153 C38 SQR 20 
SQR N28 N1  N 0 1 N N N 29.866 -14.309 -3.450 -7.565 -3.219 0.385  N28 SQR 21 
SQR N34 N2  N 0 1 N N N 25.188 -10.978 1.582  -2.659 3.121  -1.375 N34 SQR 22 
SQR O01 O1  O 0 1 N N N 17.930 -7.169  0.744  5.566  1.903  -0.129 O01 SQR 23 
SQR O04 O2  O 0 1 N N N 16.657 -8.522  -1.274 6.026  -0.846 -0.394 O04 SQR 24 
SQR O06 O3  O 0 1 N N N 15.015 -6.532  -1.684 5.212  -2.987 -1.264 O06 SQR 25 
SQR O07 O4  O 0 1 N N N 14.272 -8.813  -2.248 7.505  -2.622 -0.859 O07 SQR 26 
SQR O08 O5  O 0 1 N N N 15.941 -7.522  -3.598 5.835  -2.740 0.996  O08 SQR 27 
SQR O10 O6  O 0 1 N N N 18.770 -10.213 -2.237 3.379  -1.538 -1.230 O10 SQR 28 
SQR O13 O7  O 0 1 N N N 21.578 -5.208  0.135  2.981  3.383  2.832  O13 SQR 29 
SQR O14 O8  O 0 1 N N N 20.649 -7.716  -0.242 2.826  1.597  0.585  O14 SQR 30 
SQR O16 O9  O 0 1 N N N 21.150 -9.927  -0.707 1.416  0.506  -0.920 O16 SQR 31 
SQR O20 O10 O 0 1 N N N 22.988 -8.746  -3.490 -0.775 -2.697 0.599  O20 SQR 32 
SQR O21 O11 O 0 1 N N N 24.588 -10.511 -2.084 -1.984 -0.104 0.302  O21 SQR 33 
SQR O23 O12 O 0 1 N N N 26.553 -10.591 -0.900 -3.985 1.089  0.158  O23 SQR 34 
SQR O29 O13 O 0 1 N N N 31.189 -14.489 -3.017 -7.249 -4.298 -0.084 O29 SQR 35 
SQR O30 O14 O 0 1 N N N 29.441 -14.919 -4.356 -8.657 -3.076 0.904  O30 SQR 36 
SQR O37 O15 O 0 1 N N N 26.881 -9.476  1.907  -3.900 3.779  0.343  O37 SQR 37 
SQR O39 O16 O 0 1 N N N 22.825 -9.381  1.532  0.213  3.090  -1.160 O39 SQR 38 
SQR S05 S1  S 0 1 N N N 15.455 -7.880  -2.213 6.220  -2.354 -0.316 S05 SQR 39 
SQR H1  H1  H 0 1 N N N 20.725 -8.563  -2.150 2.169  -0.349 0.803  H1  SQR 40 
SQR H2  H2  H 0 1 N N N 22.823 -8.693  -0.994 0.327  1.205  0.692  H2  SQR 41 
SQR H3  H3  H 0 1 N N N 25.128 -12.046 -0.732 -2.880 0.463  -1.471 H3  SQR 42 
SQR H4  H4  H 0 1 N N N 27.262 -14.007 -3.841 -5.100 -3.203 -0.677 H4  SQR 43 
SQR H5  H5  H 0 1 N N N 17.790 -6.040  -1.002 5.935  0.911  1.646  H5  SQR 44 
SQR H6  H6  H 0 1 N N N 18.177 -7.782  -2.527 4.590  -1.075 1.076  H6  SQR 45 
SQR H7  H7  H 0 1 N N N 18.644 -9.669  -0.228 3.993  0.414  -1.523 H7  SQR 46 
SQR H8  H8  H 0 1 N N N 20.107 -6.301  -1.699 3.576  0.867  2.366  H8  SQR 47 
SQR H9  H9  H 0 1 N N N 19.645 -4.529  -0.065 4.989  2.901  2.791  H9  SQR 48 
SQR H10 H10 H 0 1 N N N 19.934 -5.686  1.278  4.342  3.620  1.296  H10 SQR 49 
SQR H11 H11 H 0 1 N N N 22.793 -11.622 -1.888 -0.841 -0.839 -1.253 H11 SQR 50 
SQR H12 H12 H 0 1 N N N 21.511 -10.167 -3.379 0.984  -1.665 0.267  H12 SQR 51 
SQR H13 H13 H 0 1 N N N 23.047 -10.688 -4.151 0.022  -1.114 1.660  H13 SQR 52 
SQR H14 H14 H 0 1 N N N 25.785 -12.373 -2.733 -3.528 -1.312 -0.785 H14 SQR 53 
SQR H15 H15 H 0 1 N N N 30.587 -12.516 -1.613 -7.951 -0.730 1.311  H15 SQR 54 
SQR H16 H16 H 0 1 N N N 29.110 -10.882 -0.503 -6.378 1.162  1.220  H16 SQR 55 
SQR H17 H17 H 0 1 N N N 25.044 -9.224  0.405  -1.810 2.569  0.463  H17 SQR 56 
SQR H18 H18 H 0 1 N N N 27.767 -10.675 3.902  -5.250 4.391  -2.127 H18 SQR 57 
SQR H19 H19 H 0 1 N N N 26.110 -11.256 4.279  -4.692 5.720  -1.083 H19 SQR 58 
SQR H20 H20 H 0 1 N N N 27.183 -12.230 3.217  -3.722 5.227  -2.492 H20 SQR 59 
SQR H21 H21 H 0 1 N N N 22.831 -11.265 0.621  -0.679 1.524  -2.174 H21 SQR 60 
SQR H22 H22 H 0 1 N N N 24.734 -11.810 1.902  -2.442 3.207  -2.316 H22 SQR 61 
SQR H23 H23 H 0 1 N N N 18.125 -6.413  1.285  5.763  2.795  0.187  H23 SQR 62 
SQR H24 H24 H 0 1 N N N 19.334 -10.956 -2.059 2.652  -1.533 -1.867 H24 SQR 63 
SQR H25 H25 H 0 1 N N N 21.827 -4.488  0.702  3.075  4.265  3.216  H25 SQR 64 
SQR H26 H26 H 0 1 N N N 22.679 -8.419  -4.327 -0.399 -3.407 1.139  H26 SQR 65 
SQR H27 H27 H 0 1 N N N 23.225 -9.703  2.331  -0.184 3.807  -1.673 H27 SQR 66 
SQR H28 H28 H 0 1 N N N 15.163 -5.868  -2.347 5.250  -3.953 -1.291 H28 SQR 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SQR O30 N28 DOUB N N 1  
SQR O08 S05 DOUB N N 2  
SQR O20 C19 SING N N 3  
SQR N28 O29 DOUB N N 4  
SQR N28 C27 SING N N 5  
SQR C19 C18 SING N N 6  
SQR C26 C27 DOUB Y N 7  
SQR C26 C25 SING Y N 8  
SQR C27 C31 SING Y N 9  
SQR C25 C24 DOUB Y N 10 
SQR O07 S05 DOUB N N 11 
SQR O10 C09 SING N N 12 
SQR S05 O06 SING N N 13 
SQR S05 O04 SING N N 14 
SQR O21 C18 SING N N 15 
SQR O21 C22 SING N N 16 
SQR C18 C17 SING N N 17 
SQR C31 C32 DOUB Y N 18 
SQR C24 C32 SING Y N 19 
SQR C24 O23 SING N N 20 
SQR C03 O04 SING N N 21 
SQR C03 C09 SING N N 22 
SQR C03 C02 SING N N 23 
SQR C09 C15 SING N N 24 
SQR C15 O16 SING N N 25 
SQR C15 O14 SING N N 26 
SQR O23 C22 SING N N 27 
SQR C22 C33 SING N N 28 
SQR C17 O16 SING N N 29 
SQR C17 C38 SING N N 30 
SQR C11 C02 SING N N 31 
SQR C11 O14 SING N N 32 
SQR C11 C12 SING N N 33 
SQR C02 O01 SING N N 34 
SQR O13 C12 SING N N 35 
SQR C33 C38 SING N N 36 
SQR C33 N34 SING N N 37 
SQR C38 O39 SING N N 38 
SQR N34 C35 SING N N 39 
SQR O37 C35 DOUB N N 40 
SQR C35 C36 SING N N 41 
SQR C15 H1  SING N N 42 
SQR C17 H2  SING N N 43 
SQR C22 H3  SING N N 44 
SQR C26 H4  SING N N 45 
SQR C02 H5  SING N N 46 
SQR C03 H6  SING N N 47 
SQR C09 H7  SING N N 48 
SQR C11 H8  SING N N 49 
SQR C12 H9  SING N N 50 
SQR C12 H10 SING N N 51 
SQR C18 H11 SING N N 52 
SQR C19 H12 SING N N 53 
SQR C19 H13 SING N N 54 
SQR C25 H14 SING N N 55 
SQR C31 H15 SING N N 56 
SQR C32 H16 SING N N 57 
SQR C33 H17 SING N N 58 
SQR C36 H18 SING N N 59 
SQR C36 H19 SING N N 60 
SQR C36 H20 SING N N 61 
SQR C38 H21 SING N N 62 
SQR N34 H22 SING N N 63 
SQR O01 H23 SING N N 64 
SQR O10 H24 SING N N 65 
SQR O13 H25 SING N N 66 
SQR O20 H26 SING N N 67 
SQR O39 H27 SING N N 68 
SQR O06 H28 SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SQR InChI            InChI                1.06  "InChI=1S/C20H28N2O16S/c1-8(25)21-13-15(27)17(12(7-24)36-19(13)34-10-4-2-9(3-5-10)22(29)30)37-20-16(28)18(38-39(31,32)33)14(26)11(6-23)35-20/h2-5,11-20,23-24,26-28H,6-7H2,1H3,(H,21,25)(H,31,32,33)/t11-,12-,13-,14+,15-,16-,17-,18+,19-,20+/m1/s1" 
SQR InChIKey         InChI                1.06  RWBHCBGHSHJQOQ-MRHFAZSRSA-N                                                                                                                                                                                                                          
SQR SMILES_CANONICAL CACTVS               3.385 "CC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[S](O)(=O)=O)[C@H]2O)[C@@H](CO)O[C@H]1Oc3ccc(cc3)[N](=O)=O"                                                                                                                           
SQR SMILES           CACTVS               3.385 "CC(=O)N[CH]1[CH](O)[CH](O[CH]2O[CH](CO)[CH](O)[CH](O[S](O)(=O)=O)[CH]2O)[CH](CO)O[CH]1Oc3ccc(cc3)[N](=O)=O"                                                                                                                                         
SQR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1Oc2ccc(cc2)N(=O)=O)CO)O[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)OS(=O)(=O)O)O)O"                                                                                                                              
SQR SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(C(C(OC1Oc2ccc(cc2)N(=O)=O)CO)OC3C(C(C(C(O3)CO)O)OS(=O)(=O)O)O)O"                                                                                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           SQR 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SQR "Create component" 2022-12-19 PDBE 
SQR "Initial release"  2023-03-01 RCSB 
# 
