data_N6R
#

_chem_comp.id                                   N6R
_chem_comp.name                                 "(2R)-N6-(1-Methyl-2-phenylethyl)adenosine-3',5'-cyclic monophosphate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H22 N5 O6 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(2R,4aS,6R,7R,7aR)-6-(6-{[(1R)-1-methyl-2-phenylethyl]amino}-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-07-08
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       447.382
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    N6R
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3I59
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N6R  C5H   C5H   C  0  1  Y  N  N  -5.332  23.749  -22.045   7.095  -0.547   0.299  C5H   N6R   1  
N6R  C5F   C5F   C  0  1  Y  N  N  -6.323  24.895  -21.620   7.312  -1.422   1.347  C5F   N6R   2  
N6R  C5E   C5E   C  0  1  Y  N  N  -6.221  26.304  -22.292   6.554  -2.573   1.455  C5E   N6R   3  
N6R  C5G   C5G   C  0  1  Y  N  N  -5.102  26.600  -23.435   5.579  -2.849   0.514  C5G   N6R   4  
N6R  C5I   C5I   C  0  1  Y  N  N  -4.110  25.453  -23.858   5.362  -1.974  -0.534  C5I   N6R   5  
N6R  C5U   C5U   C  0  1  Y  N  N  -4.211  24.048  -23.182   6.116  -0.820  -0.638  C5U   N6R   6  
N6R  C5M   C5M   C  0  1  N  N  N  -3.216  22.918  -23.572   5.880   0.134  -1.780  C5M   N6R   7  
N6R  C5Y   C5Y   C  0  1  N  N  R  -3.765  22.114  -24.791   4.826   1.165  -1.374  C5Y   N6R   8  
N6R  C5A   C5A   C  0  1  N  N  N  -3.467  22.957  -26.039   4.676   2.207  -2.484  C5A   N6R   9  
N6R  N6    N6    N  0  1  N  N  N  -2.990  20.856  -24.872   3.542   0.493  -1.159  N6    N6R  10  
N6R  C6    C6    C  0  1  Y  N  N  -3.334  19.663  -24.055   2.597   1.057  -0.320  C6    N6R  11  
N6R  N1    N1    N  0  1  Y  N  N  -4.713  19.245  -23.844   2.837   2.208   0.298  N1    N6R  12  
N6R  C2    C2    C  0  1  Y  N  N  -5.052  17.904  -23.028   1.941   2.754   1.100  C2    N6R  13  
N6R  N3    N3    N  0  1  Y  N  N  -3.910  17.057  -22.462   0.771   2.199   1.334  N3    N6R  14  
N6R  C4    C4    C  0  1  Y  N  N  -2.494  17.478  -22.679   0.441   1.046   0.760  C4    N6R  15  
N6R  C5    C5    C  0  1  Y  N  N  -2.170  18.773  -23.459   1.358   0.428  -0.107  C5    N6R  16  
N6R  N7    N7    N  0  1  Y  N  N  -0.691  18.944  -23.495   0.778  -0.711  -0.555  N7    N6R  17  
N6R  C8    C8    C  0  1  Y  N  N  -0.052  17.741  -22.717  -0.410  -0.826  -0.035  C8    N6R  18  
N6R  N9    N9    N  0  1  Y  N  N  -1.163  16.867  -22.224  -0.660   0.229   0.791  N9    N6R  19  
N6R  C1S   C1S   C  0  1  N  N  R  -1.012  15.588  -21.510  -1.888   0.457   1.557  C1S   N6R  20  
N6R  O4S   O4S   O  0  1  N  N  N   0.079  15.783  -20.562  -2.564  -0.802   1.792  O4S   N6R  21  
N6R  C4S   C4S   C  0  1  N  N  S   1.287  15.453  -21.330  -3.487  -0.944   0.715  C4S   N6R  22  
N6R  C5S   C5S   C  0  1  N  N  N   2.531  15.127  -20.443  -4.599  -1.957   0.904  C5S   N6R  23  
N6R  O5S   O5S   O  0  1  N  N  N   3.550  14.412  -21.183  -5.355  -1.981  -0.331  O5S   N6R  24  
N6R  P5    P5    P  0  1  N  N  R   3.234  13.838  -22.783  -5.868  -0.595  -1.002  P5    N6R  25  
N6R  O5D   O5D   O  0  1  N  N  N   3.735  15.100  -23.713  -6.020  -0.767  -2.464  O5D   N6R  26  
N6R  O5B   O5B   O  0  1  N  N  N   3.870  12.545  -22.979  -7.274  -0.155  -0.352  O5B   N6R  27  
N6R  O3S   O3S   O  0  1  N  N  N   1.746  13.732  -23.140  -4.730   0.532  -0.689  O3S   N6R  28  
N6R  C3S   C3S   C  0  1  N  N  R   0.864  14.160  -22.086  -4.108   0.474   0.598  C3S   N6R  29  
N6R  C2S   C2S   C  0  1  N  N  R  -0.546  14.489  -22.525  -2.858   1.352   0.744  C2S   N6R  30  
N6R  O2S   O2S   O  0  1  N  N  N  -1.234  13.301  -22.266  -3.163   2.548   1.464  O2S   N6R  31  
N6R  H5H   H5H   H  0  1  N  N  N  -5.396  22.774  -21.586   7.688   0.352   0.215  H5H   N6R  32  
N6R  H5F   H5F   H  0  1  N  N  N  -7.073  24.709  -20.865   8.074  -1.207   2.082  H5F   N6R  33  
N6R  H5E   H5E   H  0  1  N  N  N  -6.901  27.089  -21.994   6.724  -3.257   2.273  H5E   N6R  34  
N6R  H5G   H5G   H  0  1  N  N  N  -5.040  27.573  -23.899   4.987  -3.748   0.598  H5G   N6R  35  
N6R  H5I   H5I   H  0  1  N  N  N  -3.361  25.637  -24.614   4.601  -2.190  -1.268  H5I   N6R  36  
N6R  H5M   H5M   H  0  1  N  N  N  -2.247  23.365  -23.839   6.812   0.644  -2.026  H5M   N6R  37  
N6R  H5MA  H5MA  H  0  0  N  N  N  -3.094  22.236  -22.718   5.529  -0.421  -2.650  H5MA  N6R  38  
N6R  H5Y   H5Y   H  0  1  N  N  N  -4.840  21.899  -24.704   5.136   1.659  -0.452  H5Y   N6R  39  
N6R  H5A   H5A   H  0  1  N  N  N  -3.396  24.018  -25.757   4.365   1.713  -3.406  H5A   N6R  40  
N6R  H5AA  H5AA  H  0  0  N  N  N  -2.515  22.631  -26.483   3.924   2.941  -2.195  H5AA  N6R  41  
N6R  H5AB  H5AB  H  0  0  N  N  N  -4.277  22.826  -26.772   5.631   2.707  -2.644  H5AB  N6R  42  
N6R  HN6   HN6   H  0  1  N  N  N  -3.064  20.558  -25.824   3.355  -0.349  -1.604  HN6   N6R  43  
N6R  H2    H2    H  0  1  N  N  N  -6.078  17.602  -22.880   2.177   3.691   1.582  H2    N6R  44  
N6R  H8    H8    H  0  1  N  N  N   1.004  17.573  -22.564  -1.092  -1.642  -0.223  H8    N6R  45  
N6R  H1S   H1S   H  0  1  N  N  N  -1.954  15.287  -21.028  -1.649   0.933   2.508  H1S   N6R  46  
N6R  H4S   H4S   H  0  1  N  N  N   1.597  16.301  -21.959  -2.944  -1.166  -0.204  H4S   N6R  47  
N6R  H5S   H5S   H  0  1  N  N  N   2.959  16.072  -20.077  -4.177  -2.942   1.102  H5S   N6R  48  
N6R  H5SA  H5SA  H  0  0  N  N  N   2.200  14.487  -19.612  -5.242  -1.654   1.730  H5SA  N6R  49  
N6R  HO5B  HO5B  H  0  0  N  N  N   4.009  12.397  -23.907  -7.982  -0.803  -0.470  HO5B  N6R  50  
N6R  H3S   H3S   H  0  1  N  N  N   0.920  13.266  -21.447  -4.831   0.660   1.393  H3S   N6R  51  
N6R  H2S   H2S   H  0  1  N  N  N  -0.677  14.828  -23.563  -2.437   1.586  -0.233  H2S   N6R  52  
N6R  HO2S  HO2S  H  0  0  N  N  N  -1.390  12.841  -23.082  -2.394   3.104   1.646  HO2S  N6R  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N6R  C5U  C5H   DOUB  Y  N   1  
N6R  C5H  C5F   SING  Y  N   2  
N6R  C5H  H5H   SING  N  N   3  
N6R  C5E  C5F   DOUB  Y  N   4  
N6R  C5F  H5F   SING  N  N   5  
N6R  C5G  C5E   SING  Y  N   6  
N6R  C5E  H5E   SING  N  N   7  
N6R  C5I  C5G   DOUB  Y  N   8  
N6R  C5G  H5G   SING  N  N   9  
N6R  C5I  C5U   SING  Y  N  10  
N6R  C5I  H5I   SING  N  N  11  
N6R  C5M  C5U   SING  N  N  12  
N6R  C5Y  C5M   SING  N  N  13  
N6R  C5M  H5M   SING  N  N  14  
N6R  C5M  H5MA  SING  N  N  15  
N6R  C5A  C5Y   SING  N  N  16  
N6R  N6   C5Y   SING  N  N  17  
N6R  C5Y  H5Y   SING  N  N  18  
N6R  C5A  H5A   SING  N  N  19  
N6R  C5A  H5AA  SING  N  N  20  
N6R  C5A  H5AB  SING  N  N  21  
N6R  N6   C6    SING  N  N  22  
N6R  N6   HN6   SING  N  N  23  
N6R  C6   N1    DOUB  Y  N  24  
N6R  C6   C5    SING  Y  N  25  
N6R  N1   C2    SING  Y  N  26  
N6R  C2   N3    DOUB  Y  N  27  
N6R  C2   H2    SING  N  N  28  
N6R  C4   N3    SING  Y  N  29  
N6R  C5   C4    DOUB  Y  N  30  
N6R  C4   N9    SING  Y  N  31  
N6R  N7   C5    SING  Y  N  32  
N6R  N7   C8    DOUB  Y  N  33  
N6R  C8   N9    SING  Y  N  34  
N6R  C8   H8    SING  N  N  35  
N6R  N9   C1S   SING  N  N  36  
N6R  C2S  C1S   SING  N  N  37  
N6R  C1S  O4S   SING  N  N  38  
N6R  C1S  H1S   SING  N  N  39  
N6R  C4S  O4S   SING  N  N  40  
N6R  C3S  C4S   SING  N  N  41  
N6R  C4S  C5S   SING  N  N  42  
N6R  C4S  H4S   SING  N  N  43  
N6R  O5S  C5S   SING  N  N  44  
N6R  C5S  H5S   SING  N  N  45  
N6R  C5S  H5SA  SING  N  N  46  
N6R  P5   O5S   SING  N  N  47  
N6R  O5D  P5    DOUB  N  N  48  
N6R  O3S  P5    SING  N  N  49  
N6R  O5B  P5    SING  N  N  50  
N6R  O5B  HO5B  SING  N  N  51  
N6R  O3S  C3S   SING  N  N  52  
N6R  C2S  C3S   SING  N  N  53  
N6R  C3S  H3S   SING  N  N  54  
N6R  C2S  O2S   SING  N  N  55  
N6R  C2S  H2S   SING  N  N  56  
N6R  O2S  HO2S  SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N6R  SMILES            ACDLabs               10.04  "O=P4(OCC5OC(n2c3ncnc(NC(C)Cc1ccccc1)c3nc2)C(O)C5O4)O"  
N6R  SMILES_CANONICAL  CACTVS                3.341  "C[C@H](Cc1ccccc1)Nc2ncnc3n(cnc23)[C@@H]4O[C@H]5CO[P@](O)(=O)O[C@@H]5[C@H]4O"  
N6R  SMILES            CACTVS                3.341  "C[CH](Cc1ccccc1)Nc2ncnc3n(cnc23)[CH]4O[CH]5CO[P](O)(=O)O[CH]5[CH]4O"  
N6R  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@H](Cc1ccccc1)Nc2c3c(ncn2)n(cn3)[C@H]4[C@@H]([C@@H]5[C@@H](O4)CO[P@](=O)(O5)O)O"  
N6R  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(Cc1ccccc1)Nc2c3c(ncn2)n(cn3)C4C(C5C(O4)COP(=O)(O5)O)O"  
N6R  InChI             InChI                 1.03   "InChI=1S/C19H22N5O6P/c1-11(7-12-5-3-2-4-6-12)23-17-14-18(21-9-20-17)24(10-22-14)19-15(25)16-13(29-19)8-28-31(26,27)30-16/h2-6,9-11,13,15-16,19,25H,7-8H2,1H3,(H,26,27)(H,20,21,23)/t11-,13+,15-,16+,19-/m1/s1"  
N6R  InChIKey          InChI                 1.03   MKYZONTUKKUGCB-OCXLHJLWSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N6R  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2R,4aS,6R,7R,7aR)-6-(6-{[(1R)-1-methyl-2-phenylethyl]amino}-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide"  
N6R  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(1S,4R,6R,7R,8R)-4-hydroxy-4-oxo-8-[6-[[(2R)-1-phenylpropan-2-yl]amino]purin-9-yl]-3,5,9-trioxa-4$l^{5}-phosphabicyclo[4.3.0]nonan-7-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N6R  "Create component"      2009-07-08  RCSB  
N6R  "Modify aromatic_flag"  2011-06-04  RCSB  
N6R  "Modify descriptor"     2011-06-04  RCSB  
N6R  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     N6R
_pdbx_chem_comp_synonyms.name        "(2R,4aS,6R,7R,7aR)-6-(6-{[(1R)-1-methyl-2-phenylethyl]amino}-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
