data_KKR
# 
_chem_comp.id                                    KKR 
_chem_comp.name                                  
;1-[4-[[2-(1H-indazol-4-yl)-4-morpholin-4-yl-thieno[3,2-d]pyrimidin-6-yl]methyl]piperazin-1-yl]-6-methyl-hept-5-ene-1,4-
dione
;
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H35 N7 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "1-[4-[[2-(1H-indazol-4-yl)-4-morpholinthieno[3,2-d]pyrimidin-6-yl]methyl]piperazin-1-yl]-6-methyl-hept-5-ene-1,4-dione" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-01-09 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        573.709 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KKR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3ZIM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KKR C1   C1   C 0 1 N N N N N N -32.938 13.867 29.817 9.038  2.512  -2.382 C1   KKR 1  
KKR C2   C2   C 0 1 N N N N N N -31.986 14.148 28.681 9.972  1.454  -1.855 C2   KKR 2  
KKR C3   C3   C 0 1 N N N N N N -32.218 13.158 27.567 11.461 1.609  -2.026 C3   KKR 3  
KKR C4   C4   C 0 1 N N N N N N -30.531 14.124 29.146 9.481  0.378  -1.237 C4   KKR 4  
KKR C5   C5   C 0 1 N N N N N N -30.117 12.824 29.689 8.035  0.227  -1.071 C5   KKR 5  
KKR O6   O6   O 0 1 N N N N N N -30.437 12.492 30.812 7.283  1.079  -1.495 O6   KKR 6  
KKR C7   C7   C 0 1 N N N N N N -29.253 11.905 28.869 7.480  -0.988 -0.373 C7   KKR 7  
KKR C8   C8   C 0 1 N N N N N N -27.803 12.154 29.293 5.953  -0.900 -0.333 C8   KKR 8  
KKR C9   C9   C 0 1 N N N N N N -26.783 11.429 28.437 5.398  -2.115 0.365  C9   KKR 9  
KKR O10  O10  O 0 1 N N N N N N -27.179 10.697 27.549 6.149  -2.967 0.789  O10  KKR 10 
KKR N11  N11  N 0 1 N N N N N N -25.440 11.583 28.658 4.066  -2.254 0.518  N11  KKR 11 
KKR C12  C12  C 0 1 N N N N N N -24.880 12.465 29.710 3.503  -3.432 1.196  C12  KKR 12 
KKR C13  C13  C 0 1 N N N N N N -23.956 11.646 30.612 2.534  -2.951 2.281  C13  KKR 13 
KKR N14  N14  N 0 1 N N N N N N -22.853 11.133 29.786 1.543  -2.047 1.683  N14  KKR 14 
KKR C15  C15  C 0 1 N N N N N N -23.370 10.211 28.749 2.182  -0.839 1.143  C15  KKR 15 
KKR C16  C16  C 0 1 N N N N N N -24.408 10.899 27.837 3.137  -1.230 0.017  C16  KKR 16 
KKR C17  C17  C 0 1 N N N N N N -21.836 10.504 30.642 0.495  -1.699 2.651  C17  KKR 17 
KKR C18  C18  C 0 1 Y N N N N N -20.481 10.492 29.985 -0.624 -0.979 1.944  C18  KKR 18 
KKR C19  C19  C 0 1 Y N N N N N -20.066 9.545  29.166 -1.672 -1.577 1.401  C19  KKR 19 
KKR C20  C20  C 0 1 Y N N N N N -18.780 9.694  28.679 -2.624 -0.686 0.773  C20  KKR 20 
KKR N21  N21  N 0 1 Y N N N N N -18.123 8.840  27.816 -3.783 -0.963 0.137  N21  KKR 21 
KKR C22  C22  C 0 1 Y N N N N N -16.865 9.107  27.378 -4.523 -0.000 -0.377 C22  KKR 22 
KKR N23  N23  N 0 1 Y N N N N N -16.260 10.211 27.829 -4.175 1.281  -0.299 N23  KKR 23 
KKR C24  C24  C 0 1 Y N N N N N -16.787 11.086 28.710 -3.054 1.643  0.308  C24  KKR 24 
KKR C25  C25  C 0 1 Y N N N N N -18.124 10.830 29.157 -2.231 0.651  0.871  C25  KKR 25 
KKR S26  S26  S 0 1 Y N N N N N -19.258 11.648 30.231 -0.708 0.761  1.740  S26  KKR 26 
KKR N27  N27  N 0 1 N N N N N N -16.024 12.175 29.165 -2.698 2.980  0.386  N27  KKR 27 
KKR C28  C28  C 0 1 N N N N N N -16.620 13.389 29.794 -3.702 3.832  -0.268 C28  KKR 28 
KKR C29  C29  C 0 1 N N N N N N -15.755 14.663 29.802 -3.240 5.291  -0.211 C29  KKR 29 
KKR O30  O30  O 0 1 N N N N N N -14.376 14.348 29.852 -3.019 5.663  1.153  O30  KKR 30 
KKR C31  C31  C 0 1 N N N N N N -13.968 13.473 28.805 -2.046 4.854  1.819  C31  KKR 31 
KKR C32  C32  C 0 1 N N N N N N -14.544 12.100 29.157 -2.496 3.391  1.783  C32  KKR 32 
KKR C33  C33  C 0 1 Y N N N N N -16.208 8.179  26.410 -5.785 -0.358 -1.064 C33  KKR 33 
KKR C34  C34  C 0 1 Y N N N N N -16.833 6.995  25.966 -6.586 0.631  -1.615 C34  KKR 34 
KKR C35  C35  C 0 1 Y N N N N N -16.219 6.124  25.076 -7.767 0.299  -2.260 C35  KKR 35 
KKR C36  C36  C 0 1 Y N N N N N -15.001 6.385  24.533 -8.167 -1.015 -2.365 C36  KKR 36 
KKR C37  C37  C 0 1 Y N N N N N -14.317 7.550  24.882 -7.383 -2.030 -1.822 C37  KKR 37 
KKR N38  N38  N 0 1 Y N N N N N -13.147 8.056  24.516 -7.507 -3.395 -1.766 N38  KKR 38 
KKR N39  N39  N 0 1 Y N N N N N -12.946 9.172  25.107 -6.396 -3.904 -1.083 N39  KKR 39 
KKR C40  C40  C 0 1 Y N N N N N -13.941 9.479  25.911 -5.613 -2.926 -0.727 C40  KKR 40 
KKR C41  C41  C 0 1 Y N N N N N -14.884 8.460  25.830 -6.179 -1.709 -1.170 C41  KKR 41 
KKR H11C H11C H 0 0 N N N N N N -32.766 14.591 30.628 9.618  3.307  -2.851 H11C KKR 42 
KKR H12C H12C H 0 0 N N N N N N -33.974 13.958 29.458 8.366  2.070  -3.117 H12C KKR 43 
KKR H13C H13C H 0 0 N N N N N N -32.768 12.848 30.194 8.456  2.925  -1.559 H13C KKR 44 
KKR H31C H31C H 0 0 N N N N N N -31.522 13.366 26.740 11.872 2.140  -1.168 H31C KKR 45 
KKR H32C H32C H 0 0 N N N N N N -32.048 12.138 27.942 11.924 0.625  -2.100 H32C KKR 46 
KKR H33C H33C H 0 0 N N N N N N -33.253 13.248 27.206 11.665 2.175  -2.935 H33C KKR 47 
KKR H4C  H4C  H 0 1 N N N N N N -29.873 14.978 29.082 10.150 -0.381 -0.859 H4C  KKR 48 
KKR H71C H71C H 0 0 N N N N N N -29.528 10.857 29.061 7.778  -1.886 -0.914 H71C KKR 49 
KKR H72C H72C H 0 0 N N N N N N -29.377 12.126 27.799 7.868  -1.031 0.645  H72C KKR 50 
KKR H81C H81C H 0 0 N N N N N N -27.604 13.234 29.230 5.655  -0.002 0.208  H81C KKR 51 
KKR H82C H82C H 0 0 N N N N N N -27.683 11.819 30.334 5.565  -0.857 -1.351 H82C KKR 52 
KKR H121 H121 H 0 0 N N N N N N -24.309 13.280 29.241 2.968  -4.049 0.475  H121 KKR 53 
KKR H122 H122 H 0 0 N N N N N N -25.699 12.889 30.310 4.306  -4.010 1.653  H122 KKR 54 
KKR H161 H161 H 0 0 N N N N N N -24.892 10.142 27.202 3.699  -0.353 -0.306 H161 KKR 55 
KKR H162 H162 H 0 0 N N N N N N -23.899 11.639 27.202 2.566  -1.631 -0.821 H162 KKR 56 
KKR H131 H131 H 0 0 N N N N N N -23.556 12.284 31.414 2.024  -3.809 2.720  H131 KKR 57 
KKR H132 H132 H 0 0 N N N N N N -24.513 10.807 31.054 3.088  -2.422 3.056  H132 KKR 58 
KKR H151 H151 H 0 0 N N N N N N -22.529 9.862  28.132 1.418  -0.165 0.756  H151 KKR 59 
KKR H152 H152 H 0 0 N N N N N N -23.845 9.350  29.243 2.741  -0.339 1.934  H152 KKR 60 
KKR H171 H171 H 0 0 N N N N N N -21.769 11.065 31.586 0.108  -2.610 3.110  H171 KKR 61 
KKR H172 H172 H 0 0 N N N N N N -22.139 9.468  30.852 0.912  -1.053 3.423  H172 KKR 62 
KKR H19  H19  H 0 1 N N N N N N -20.690 8.707  28.893 -1.807 -2.648 1.425  H19  KKR 63 
KKR H281 H281 H 0 0 N N N N N N -17.550 13.621 29.254 -3.816 3.527  -1.308 H281 KKR 64 
KKR H282 H282 H 0 0 N N N N N N -16.856 13.140 30.839 -4.656 3.732  0.249  H282 KKR 65 
KKR H321 H321 H 0 0 N N N N N N -14.186 11.796 30.152 -3.431 3.283  2.333  H321 KKR 66 
KKR H322 H322 H 0 0 N N N N N N -14.218 11.362 28.409 -1.730 2.763  2.240  H322 KKR 67 
KKR H291 H291 H 0 0 N N N N N N -15.958 15.240 28.887 -2.313 5.402  -0.773 H291 KKR 68 
KKR H292 H292 H 0 0 N N N N N N -16.016 15.268 30.683 -4.008 5.933  -0.643 H292 KKR 69 
KKR H311 H311 H 0 0 N N N N N N -14.367 13.819 27.840 -1.085 4.952  1.316  H311 KKR 70 
KKR H312 H312 H 0 0 N N N N N N -12.870 13.425 28.752 -1.951 5.179  2.855  H312 KKR 71 
KKR H34  H34  H 0 1 N N N N N N -17.822 6.758  26.330 -6.287 1.667  -1.541 H34  KKR 72 
KKR H35  H35  H 0 1 N N N N N N -16.726 5.209  24.806 -8.382 1.080  -2.684 H35  KKR 73 
KKR H36  H36  H 0 1 N N N N N N -14.562 5.691  23.831 -9.090 -1.258 -2.870 H36  KKR 74 
KKR H38  H38  H 0 1 N N N N N N -12.514 7.627  23.872 -8.237 -3.916 -2.134 H38  KKR 75 
KKR H40  H40  H 0 1 N N N N N N -14.013 10.365 26.525 -4.684 -3.028 -0.186 H40  KKR 76 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KKR C1  C2   SING N N 1  
KKR C2  C3   SING N N 2  
KKR C2  C4   DOUB N N 3  
KKR C4  C5   SING N N 4  
KKR C5  O6   DOUB N N 5  
KKR C5  C7   SING N N 6  
KKR C7  C8   SING N N 7  
KKR C8  C9   SING N N 8  
KKR C9  O10  DOUB N N 9  
KKR C9  N11  SING N N 10 
KKR N11 C12  SING N N 11 
KKR N11 C16  SING N N 12 
KKR C12 C13  SING N N 13 
KKR C13 N14  SING N N 14 
KKR N14 C15  SING N N 15 
KKR N14 C17  SING N N 16 
KKR C15 C16  SING N N 17 
KKR C17 C18  SING N N 18 
KKR C18 C19  DOUB Y N 19 
KKR C18 S26  SING Y N 20 
KKR C19 C20  SING Y N 21 
KKR C20 N21  SING Y N 22 
KKR C20 C25  DOUB Y N 23 
KKR N21 C22  DOUB Y N 24 
KKR C22 N23  SING Y N 25 
KKR C22 C33  SING N N 26 
KKR N23 C24  DOUB Y N 27 
KKR C24 C25  SING Y N 28 
KKR C24 N27  SING N N 29 
KKR C25 S26  SING Y N 30 
KKR N27 C28  SING N N 31 
KKR N27 C32  SING N N 32 
KKR C28 C29  SING N N 33 
KKR C29 O30  SING N N 34 
KKR O30 C31  SING N N 35 
KKR C31 C32  SING N N 36 
KKR C33 C34  SING Y N 37 
KKR C33 C41  DOUB Y N 38 
KKR C34 C35  DOUB Y N 39 
KKR C35 C36  SING Y N 40 
KKR C36 C37  DOUB Y N 41 
KKR C37 N38  SING Y N 42 
KKR C37 C41  SING Y N 43 
KKR N38 N39  SING Y N 44 
KKR N39 C40  DOUB Y N 45 
KKR C40 C41  SING Y N 46 
KKR C1  H11C SING N N 47 
KKR C1  H12C SING N N 48 
KKR C1  H13C SING N N 49 
KKR C3  H31C SING N N 50 
KKR C3  H32C SING N N 51 
KKR C3  H33C SING N N 52 
KKR C4  H4C  SING N N 53 
KKR C7  H71C SING N N 54 
KKR C7  H72C SING N N 55 
KKR C8  H81C SING N N 56 
KKR C8  H82C SING N N 57 
KKR C12 H121 SING N N 58 
KKR C12 H122 SING N N 59 
KKR C16 H161 SING N N 60 
KKR C16 H162 SING N N 61 
KKR C13 H131 SING N N 62 
KKR C13 H132 SING N N 63 
KKR C15 H151 SING N N 64 
KKR C15 H152 SING N N 65 
KKR C17 H171 SING N N 66 
KKR C17 H172 SING N N 67 
KKR C19 H19  SING N N 68 
KKR C28 H281 SING N N 69 
KKR C28 H282 SING N N 70 
KKR C32 H321 SING N N 71 
KKR C32 H322 SING N N 72 
KKR C29 H291 SING N N 73 
KKR C29 H292 SING N N 74 
KKR C31 H311 SING N N 75 
KKR C31 H312 SING N N 76 
KKR C34 H34  SING N N 77 
KKR C35 H35  SING N N 78 
KKR C36 H36  SING N N 79 
KKR N38 H38  SING N N 80 
KKR C40 H40  SING N N 81 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KKR SMILES           ACDLabs              12.01 "O=C(\C=C(/C)C)CCC(=O)N1CCN(CC1)Cc3sc2c(nc(nc2c3)c5cccc4nncc45)N6CCOCC6"                                                                                                                          
KKR InChI            InChI                1.03  "InChI=1S/C30H35N7O3S/c1-20(2)16-21(38)6-7-27(39)36-10-8-35(9-11-36)19-22-17-26-28(41-22)30(37-12-14-40-15-13-37)33-29(32-26)23-4-3-5-25-24(23)18-31-34-25/h3-5,16-18H,6-15,19H2,1-2H3,(H,31,34)" 
KKR InChIKey         InChI                1.03  DLNUPKDFXMWRFP-UHFFFAOYSA-N                                                                                                                                                                       
KKR SMILES_CANONICAL CACTVS               3.385 "CC(C)=CC(=O)CCC(=O)N1CCN(CC1)Cc2sc3c(c2)nc(nc3N4CCOCC4)c5cccc6[nH]ncc56"                                                                                                                         
KKR SMILES           CACTVS               3.385 "CC(C)=CC(=O)CCC(=O)N1CCN(CC1)Cc2sc3c(c2)nc(nc3N4CCOCC4)c5cccc6[nH]ncc56"                                                                                                                         
KKR SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC(=CC(=O)CCC(=O)N1CCN(CC1)Cc2cc3c(s2)c(nc(n3)c4cccc5c4cn[nH]5)N6CCOCC6)C"                                                                                                                       
KKR SMILES           "OpenEye OEToolkits" 1.9.2 "CC(=CC(=O)CCC(=O)N1CCN(CC1)Cc2cc3c(s2)c(nc(n3)c4cccc5c4cn[nH]5)N6CCOCC6)C"                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KKR "SYSTEMATIC NAME" ACDLabs              12.01 "1-(4-{[2-(1H-indazol-4-yl)-4-(morpholin-4-yl)thieno[3,2-d]pyrimidin-6-yl]methyl}piperazin-1-yl)-6-methylhept-5-ene-1,4-dione" 
KKR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "1-[4-[[2-(1H-indazol-4-yl)-4-morpholin-4-yl-thieno[3,2-d]pyrimidin-6-yl]methyl]piperazin-1-yl]-6-methyl-hept-5-ene-1,4-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KKR "Create component"  2013-01-09 EBI  
KKR "Create component"  2013-01-16 EBI  
KKR "Initial release"   2013-02-08 RCSB 
KKR "Modify descriptor" 2014-09-05 RCSB 
KKR "Modify synonyms"   2020-06-05 PDBE 
KKR "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      KKR 
_pdbx_chem_comp_synonyms.name         "1-[4-[[2-(1H-indazol-4-yl)-4-morpholinthieno[3,2-d]pyrimidin-6-yl]methyl]piperazin-1-yl]-6-methyl-hept-5-ene-1,4-dione" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            KKR 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C2 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
