data_H6R
# 
_chem_comp.id                                    H6R 
_chem_comp.name                                  "(2~{S})-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[(~{E})-3-phenylprop-2-enoyl]amino]pent-4-ynamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H23 N3 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-11-19 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        381.425 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     H6R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7DHJ 
_chem_comp.pdbx_subcomponent_list                "TCA LPH ELL" 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
H6R C08 C12 C 0 1 N N N N N N -11.837 11.803 69.736 2.200  -0.269 -0.548 C1  TCA 1  
H6R O17 O2  O 0 1 N N N N N N -12.276 11.769 68.644 2.057  -0.241 -1.756 O   TCA 2  
H6R C09 C13 C 0 1 N N N N N N -11.404 10.524 70.491 3.499  0.060  0.044  C2  TCA 3  
H6R C10 C1  C 0 1 N N N N N N -11.236 9.473  69.676 4.538  0.387  -0.750 C3  TCA 4  
H6R C11 C14 C 0 1 Y N N N N N -10.813 8.210  70.471 5.843  0.717  -0.156 C31 TCA 5  
H6R C12 C15 C 0 1 Y N N N N N -10.725 6.988  69.825 6.011  0.686  1.232  C32 TCA 6  
H6R C13 C2  C 0 1 Y N N N N N -10.353 5.872  70.529 7.237  0.996  1.782  C33 TCA 7  
H6R C14 C16 C 0 1 Y N N N N N -10.068 5.971  71.869 8.300  1.337  0.964  C34 TCA 8  
H6R C15 C3  C 0 1 Y N N N N N -10.163 7.196  72.507 8.142  1.370  -0.411 C35 TCA 9  
H6R C16 C17 C 0 1 Y N N N N N -10.533 8.310  71.814 6.924  1.057  -0.976 C36 TCA 10 
H6R C06 C11 C 0 1 N N N N N N -12.899 15.061 73.273 1.611  -2.835 -2.655 CD  LPH 11 
H6R C05 C10 C 0 1 N N N N N N -12.323 15.209 72.222 0.825  -2.643 -1.805 CG  LPH 12 
H6R C04 C9  C 0 1 N N N N N N -11.603 15.400 70.907 -0.161 -2.403 -0.738 CB  LPH 13 
H6R C03 C8  C 0 1 N N S N N N -12.065 14.356 69.906 -0.138 -0.924 -0.346 CA  LPH 14 
H6R N07 N1  N 0 1 N N N N N N -11.679 13.074 70.467 1.161  -0.596 0.246  N   LPH 15 
H6R C02 C7  C 0 1 N N N N N N -11.422 14.639 68.534 -1.230 -0.653 0.657  C   LPH 16 
H6R O01 O1  O 0 1 N N N N N N -10.301 14.296 68.276 -0.950 -0.228 1.758  O   LPH 17 
H6R O28 O4  O 0 1 N N N N N N -13.290 12.616 63.692 -6.537 0.429  -1.728 OAD ELL 18 
H6R C27 C21 C 0 1 N N N N N N -12.203 12.614 64.118 -5.959 1.257  -1.056 CD2 ELL 19 
H6R N26 N3  N 0 1 N N N N N N -10.976 11.714 63.571 -6.326 2.545  -0.937 NAH ELL 20 
H6R C25 C20 C 0 1 N N N N N N -9.734  12.084 64.496 -5.410 3.281  -0.057 CAE ELL 21 
H6R C24 C6  C 0 1 N N N N N N -10.013 13.243 64.983 -4.637 2.200  0.731  CD1 ELL 22 
H6R C23 C19 C 0 1 N N S N N N -11.726 13.308 65.121 -4.723 0.989  -0.225 CG  ELL 23 
H6R C22 C5  C 0 1 N N N N N N -12.232 14.770 65.091 -4.882 -0.310 0.568  CB  ELL 24 
H6R C19 C18 C 0 1 N N S N N N -11.640 15.678 66.228 -3.578 -0.620 1.305  CA  ELL 25 
H6R N18 N2  N 0 1 N N N N N N -12.240 15.386 67.506 -2.517 -0.884 0.330  N   ELL 26 
H6R C20 C4  C 0 1 N N N N N N -11.902 17.188 65.974 -3.771 -1.834 2.178  C   ELL 27 
H6R O21 O3  O 0 1 N N N N N N -11.394 17.731 65.035 -3.092 -2.817 2.003  O   ELL 28 
H6R H14 H14 H 0 1 N N N N N N -11.253 10.482 71.560 3.624  0.039  1.116  H2  TCA 29 
H6R H1  H1  H 0 1 N N N N N N -11.377 9.502  68.606 4.412  0.407  -1.823 H3  TCA 30 
H6R H16 H16 H 0 1 N N N N N N -10.949 6.915  68.771 5.183  0.420  1.872  H32 TCA 31 
H6R H3  H3  H 0 1 N N N N N N -10.284 4.916  70.031 7.369  0.972  2.854  H33 TCA 32 
H6R H17 H17 H 0 1 N N N N N N -9.770  5.094  72.424 9.258  1.579  1.400  H34 TCA 33 
H6R H4  H4  H 0 1 N N N N N N -9.942  7.270  73.562 8.976  1.638  -1.043 H35 TCA 34 
H6R H18 H18 H 0 1 N N N N N N -10.606 9.264  72.316 6.803  1.079  -2.049 H36 TCA 35 
H6R H13 H13 H 0 1 N N N N N N -13.405 14.931 74.196 2.314  -3.006 -3.416 H1  LPH 36 
H6R H11 H11 H 0 1 N N N N N N -10.519 15.297 71.067 -1.156 -2.668 -1.096 H2  LPH 37 
H6R H12 H12 H 0 1 N N N N N N -11.822 16.404 70.514 0.087  -3.013 0.131  H3  LPH 38 
H6R H10 H10 H 0 1 N N N N N N -13.159 14.411 69.805 -0.299 -0.311 -1.233 H4  LPH 39 
H6R H23 H23 H 0 1 N N N N N N -11.290 13.052 71.388 1.274  -0.614 1.209  H6  LPH 40 
H6R H25 H25 H 0 1 N N N N N N -10.994 11.063 62.812 -7.096 2.937  -1.376 H1  ELL 41 
H6R H21 H21 H 0 1 N N N N N N -9.618  11.344 65.302 -4.720 3.882  -0.649 H2  ELL 42 
H6R H22 H22 H 0 1 N N N N N N -8.809  12.127 63.902 -5.973 3.916  0.627  H3  ELL 43 
H6R H8  H8  H 0 1 N N N N N N -9.546  13.363 65.972 -3.602 2.500  0.892  H4  ELL 44 
H6R H9  H9  H 0 1 N N N N N N -9.655  14.036 64.310 -5.130 1.981  1.678  H5  ELL 45 
H6R H20 H20 H 0 1 N N N N N N -11.983 12.865 66.095 -3.839 0.944  -0.860 H6  ELL 46 
H6R H6  H6  H 0 1 N N N N N N -11.959 15.210 64.120 -5.691 -0.198 1.291  H7  ELL 47 
H6R H7  H7  H 0 1 N N N N N N -13.327 14.758 65.193 -5.117 -1.126 -0.115 H8  ELL 48 
H6R H19 H19 H 0 1 N N N N N N -10.553 15.513 66.274 -3.299 0.232  1.925  H9  ELL 49 
H6R H24 H24 H 0 1 N N N N N N -13.177 15.671 67.708 -2.741 -1.224 -0.550 H11 ELL 50 
H6R H5  H5  H 0 1 N N N N N N -12.540 17.747 66.642 -4.517 -1.824 2.959  H13 ELL 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
H6R N26 C27 SING N N 1  
H6R N26 C25 SING N N 2  
H6R O28 C27 DOUB N N 3  
H6R C27 C23 SING N N 4  
H6R C25 C24 SING N N 5  
H6R C24 C23 SING N N 6  
H6R O21 C20 DOUB N N 7  
H6R C22 C23 SING N N 8  
H6R C22 C19 SING N N 9  
H6R C20 C19 SING N N 10 
H6R C19 N18 SING N N 11 
H6R N18 C02 SING N N 12 
H6R O01 C02 DOUB N N 13 
H6R C02 C03 SING N N 14 
H6R O17 C08 DOUB N N 15 
H6R C10 C11 SING N N 16 
H6R C10 C09 DOUB N E 17 
H6R C08 N07 SING N N 18 
H6R C08 C09 SING N N 19 
H6R C12 C11 DOUB Y N 20 
H6R C12 C13 SING Y N 21 
H6R C03 N07 SING N N 22 
H6R C03 C04 SING N N 23 
H6R C11 C16 SING Y N 24 
H6R C13 C14 DOUB Y N 25 
H6R C04 C05 SING N N 26 
H6R C16 C15 DOUB Y N 27 
H6R C14 C15 SING Y N 28 
H6R C05 C06 TRIP N N 29 
H6R C10 H1  SING N N 30 
H6R C13 H3  SING N N 31 
H6R C15 H4  SING N N 32 
H6R C20 H5  SING N N 33 
H6R C22 H6  SING N N 34 
H6R C22 H7  SING N N 35 
H6R C24 H8  SING N N 36 
H6R C24 H9  SING N N 37 
H6R C03 H10 SING N N 38 
H6R C04 H11 SING N N 39 
H6R C04 H12 SING N N 40 
H6R C06 H13 SING N N 41 
H6R C09 H14 SING N N 42 
H6R C12 H16 SING N N 43 
H6R C14 H17 SING N N 44 
H6R C16 H18 SING N N 45 
H6R C19 H19 SING N N 46 
H6R C23 H20 SING N N 47 
H6R C25 H21 SING N N 48 
H6R C25 H22 SING N N 49 
H6R N07 H23 SING N N 50 
H6R N18 H24 SING N N 51 
H6R N26 H25 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
H6R InChI            InChI                1.03  "InChI=1S/C21H23N3O4/c1-2-6-18(24-19(26)10-9-15-7-4-3-5-8-15)21(28)23-17(14-25)13-16-11-12-22-20(16)27/h1,3-5,7-10,14,16-18H,6,11-13H2,(H,22,27)(H,23,28)(H,24,26)/b10-9+/t16-,17-,18-/m0/s1" 
H6R InChIKey         InChI                1.03  QZMKOYAKHMOPIL-GIGACSBGSA-N                                                                                                                                                                   
H6R SMILES_CANONICAL CACTVS               3.385 "O=C[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](CC#C)NC(=O)/C=C/c2ccccc2"                                                                                                                               
H6R SMILES           CACTVS               3.385 "O=C[CH](C[CH]1CCNC1=O)NC(=O)[CH](CC#C)NC(=O)C=Cc2ccccc2"                                                                                                                                     
H6R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C#CC[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)C=O)NC(=O)/C=C/c2ccccc2"                                                                                                                             
H6R SMILES           "OpenEye OEToolkits" 2.0.7 "C#CCC(C(=O)NC(CC1CCNC1=O)C=O)NC(=O)C=Cc2ccccc2"                                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           H6R 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[(~{E})-3-phenylprop-2-enoyl]amino]pent-4-ynamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
H6R "Create component" 2020-11-19 PDBJ 
H6R "Initial release"  2021-11-24 RCSB 
H6R "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            H6R 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C20 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
