data_A1AWR
# 
_chem_comp.id                                    A1AWR 
_chem_comp.name                                  "1-{(3S)-4-[(7M)-7-[6-amino-4-methyl-3-(trifluoromethyl)pyridin-2-yl]-6-chloro-8-fluoro-2-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}quinazolin-4-yl]-3-methylpiperazin-1-yl}propan-1-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H34 Cl F4 N7 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "divarasib, bound form" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-07-05 
_chem_comp.pdbx_modified_date                    2024-12-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        624.073 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AWR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9C76 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AWR N1  N1  N  0 1 N N N N N N 3.495   4.573  -3.600 6.317  2.485  2.648  N1  A1AWR 1  
A1AWR C2  C1  C  0 1 Y N N N N N 0.641   6.382  -4.589 3.895  1.038  0.450  C2  A1AWR 2  
A1AWR C3  C2  C  0 1 Y N N N N N -0.793  6.197  -4.240 2.421  0.894  0.397  C3  A1AWR 3  
A1AWR C4  C3  C  0 1 Y N N N N N -1.652  5.454  -5.047 1.615  2.032  0.237  C4  A1AWR 4  
A1AWR C5  C4  C  0 1 Y N N N N N -2.969  5.280  -4.708 0.258  1.924  0.185  C5  A1AWR 5  
A1AWR C6  C5  C  0 1 Y N N N N N -3.483  5.843  -3.519 -0.346 0.665  0.292  C6  A1AWR 6  
A1AWR C11 C6  C  0 1 N N N N N N -7.503  5.114  -5.557 -4.106 2.815  -1.392 C11 A1AWR 7  
A1AWR C12 C7  C  0 1 N N N N N N -7.300  3.104  -4.165 -4.258 3.056  1.117  C12 A1AWR 8  
A1AWR C21 C8  C  0 1 N N N N N N -2.990  11.092 -0.746 -1.250 -7.569 -0.021 C21 A1AWR 9  
A1AWR C22 C9  C  0 1 N N N N N N -4.023  10.017 -0.427 -1.049 -6.595 1.163  C22 A1AWR 10 
A1AWR C24 C10 C  0 1 Y N N N N N -1.269  6.755  -3.060 1.849  -0.365 0.499  C24 A1AWR 11 
A1AWR C25 C11 C  0 1 Y N N N N N 1.148   7.399  -5.423 4.677  0.517  -0.578 C25 A1AWR 12 
A1AWR C29 C12 C  0 1 N N N N N N 0.248   8.420  -6.065 4.032  -0.192 -1.741 C29 A1AWR 13 
A1AWR N3  N2  N  0 1 Y N N N N N -3.068  7.153  -1.519 -0.151 -1.687 0.553  N3  A1AWR 14 
A1AWR C8  C13 C  0 1 Y N N N N N -4.347  6.962  -1.205 -1.464 -1.777 0.501  C8  A1AWR 15 
A1AWR N4  N3  N  0 1 Y N N N N N -5.236  6.279  -1.928 -2.252 -0.718 0.351  N4  A1AWR 16 
A1AWR C9  C14 C  0 1 Y N N N N N -4.842  5.713  -3.078 -1.753 0.505  0.243  C9  A1AWR 17 
A1AWR N5  N4  N  0 1 N N N N N N -5.810  5.001  -3.792 -2.583 1.595  0.088  N5  A1AWR 18 
A1AWR C10 C15 C  0 1 N N N N N N -6.026  5.145  -5.230 -3.337 1.508  -1.169 C10 A1AWR 19 
A1AWR C7  C16 C  0 1 Y N N N N N -2.616  6.589  -2.686 0.453  -0.493 0.454  C7  A1AWR 20 
A1AWR N2  N5  N  0 1 Y N N N N N 1.431   5.473  -4.001 4.458  1.669  1.474  N2  A1AWR 21 
A1AWR C1  C17 C  0 1 Y N N N N N 2.760   5.510  -4.208 5.769  1.818  1.558  C1  A1AWR 22 
A1AWR O1  O1  O  0 1 N N N N N N -9.825  3.938  -6.591 -6.890 3.583  0.694  O1  A1AWR 23 
A1AWR O2  O2  O  0 1 N N N N N N -4.794  7.512  -0.075 -2.035 -3.001 0.605  O2  A1AWR 24 
A1AWR C14 C18 C  0 1 N N N N N N -7.821  4.780  -2.342 -2.662 1.750  2.531  C14 A1AWR 25 
A1AWR N6  N6  N  0 1 N N N N N N -8.124  3.861  -5.116 -4.919 3.088  -0.197 N6  A1AWR 26 
A1AWR C15 C19 C  0 1 N N N N N N -9.358  3.498  -5.545 -6.235 3.360  -0.303 C15 A1AWR 27 
A1AWR N7  N7  N  0 1 N N N N N N -1.909  9.175  0.121  -2.637 -5.680 -0.429 N7  A1AWR 28 
A1AWR C16 C20 C  0 1 N N N N N N -10.167 2.549  -4.692 -6.892 3.388  -1.658 C16 A1AWR 29 
A1AWR C19 C21 C  0 1 N N S N N N -3.285  9.223  0.655  -1.977 -5.403 0.865  C19 A1AWR 30 
A1AWR C18 C22 C  0 1 N N N N N N -3.844  7.853  0.945  -1.155 -4.115 0.766  C18 A1AWR 31 
A1AWR C17 C23 C  0 1 N N N N N N -11.647 2.607  -4.988 -8.377 3.718  -1.499 C17 A1AWR 32 
A1AWR C13 C24 C  0 1 N N S N N N -6.728  4.058  -3.120 -3.483 1.740  1.240  C13 A1AWR 33 
A1AWR C20 C25 C  0 1 N N N N N N -1.683  10.316 -0.772 -2.637 -7.158 -0.576 C20 A1AWR 34 
A1AWR C26 C26 C  0 1 Y N N N N N 2.537   7.443  -5.644 6.054  0.657  -0.518 C26 A1AWR 35 
A1AWR C27 C27 C  0 1 N N N N N N 3.171   8.500  -6.518 6.932  0.106  -1.612 C27 A1AWR 36 
A1AWR C28 C28 C  0 1 Y N N N N N 3.346   6.497  -5.035 6.607  1.315  0.567  C28 A1AWR 37 
A1AWR C23 C29 C  0 1 N N N N N N -0.884  9.038  1.148  -4.007 -5.149 -0.445 C23 A1AWR 38 
A1AWR CL1 CL1 CL 0 0 N N N N N N -1.054  4.753  -6.513 2.356  3.596  0.105  CL1 A1AWR 39 
A1AWR F1  F1  F  0 1 N N N N N N -0.442  7.472  -2.259 2.629  -1.459 0.647  F1  A1AWR 40 
A1AWR F2  F2  F  0 1 N N N N N N -1.008  8.036  -6.199 4.811  -0.009 -2.888 F2  A1AWR 41 
A1AWR F3  F3  F  0 1 N N N N N N 0.602   8.723  -7.302 3.933  -1.558 -1.458 F3  A1AWR 42 
A1AWR F4  F4  F  0 1 N N N N N N 0.218   9.569  -5.413 2.754  0.334  -1.957 F4  A1AWR 43 
A1AWR H2  H1  H  0 1 N N N N N N 2.898   3.974  -3.067 5.738  2.838  3.341  H2  A1AWR 44 
A1AWR H1  H2  H  0 1 N N N N N N 3.981   4.033  -4.287 7.278  2.595  2.717  H1  A1AWR 45 
A1AWR H3  H3  H  0 1 N N N N N N -3.618  4.708  -5.355 -0.351 2.807  0.063  H3  A1AWR 46 
A1AWR H6  H4  H  0 1 N N N N N N -7.999  5.956  -5.052 -3.402 3.632  -1.549 H6  A1AWR 47 
A1AWR H7  H5  H  0 1 N N N N N N -7.630  5.213  -6.645 -4.755 2.715  -2.261 H7  A1AWR 48 
A1AWR H8  H6  H  0 1 N N N N N N -7.919  2.343  -3.668 -3.568 3.896  1.200  H8  A1AWR 49 
A1AWR H9  H7  H  0 1 N N N N N N -6.476  2.612  -4.703 -5.006 3.117  1.908  H9  A1AWR 50 
A1AWR H24 H8  H  0 1 N N N N N N -2.973  11.868 0.034  -0.476 -7.427 -0.774 H24 A1AWR 51 
A1AWR H25 H9  H  0 1 N N N N N N -3.193  11.557 -1.722 -1.262 -8.602 0.328  H25 A1AWR 52 
A1AWR H27 H10 H  0 1 N N N N N N -4.957  10.454 -0.043 -1.336 -7.073 2.099  H27 A1AWR 53 
A1AWR H26 H11 H  0 1 N N N N N N -4.244  9.394  -1.306 -0.011 -6.265 1.208  H26 A1AWR 54 
A1AWR H4  H12 H  0 1 N N N N N N -5.523  4.319  -5.755 -4.041 0.678  -1.115 H4  A1AWR 55 
A1AWR H5  H13 H  0 1 N N N N N N -5.603  6.104  -5.564 -2.647 1.348  -1.997 H5  A1AWR 56 
A1AWR H12 H14 H  0 1 N N N N N N -7.362  5.454  -1.603 -3.319 1.948  3.378  H12 A1AWR 57 
A1AWR H13 H15 H  0 1 N N N N N N -8.440  5.366  -3.037 -2.182 0.781  2.664  H13 A1AWR 58 
A1AWR H11 H16 H  0 1 N N N N N N -8.450  4.042  -1.823 -1.901 2.528  2.472  H11 A1AWR 59 
A1AWR H14 H18 H  0 1 N N N N N N -9.813  1.524  -4.875 -6.415 4.148  -2.278 H14 A1AWR 60 
A1AWR H15 H19 H  0 1 N N N N N N -10.010 2.808  -3.634 -6.786 2.413  -2.134 H15 A1AWR 61 
A1AWR H21 H20 H  0 1 N N N N N N -3.291  9.812  1.584  -2.725 -5.309 1.651  H21 A1AWR 62 
A1AWR H19 H21 H  0 1 N N N N N N -4.342  7.857  1.926  -0.486 -4.177 -0.093 H19 A1AWR 63 
A1AWR H20 H22 H  0 1 N N N N N N -3.028  7.115  0.951  -0.569 -3.988 1.675  H20 A1AWR 64 
A1AWR H17 H23 H  0 1 N Y N N N N -12.180 1.897  -4.338 -8.854 2.958  -0.879 H17 A1AWR 65 
A1AWR H18 H24 H  0 1 N N N N N N -12.019 3.625  -4.800 -8.483 4.693  -1.023 H18 A1AWR 66 
A1AWR H16 H25 H  0 1 N N N N N N -11.821 2.341  -6.041 -8.852 3.738  -2.480 H16 A1AWR 67 
A1AWR H10 H26 H  0 1 N N N N N N -6.146  3.460  -2.404 -4.184 0.906  1.261  H10 A1AWR 68 
A1AWR H23 H27 H  0 1 N N N N N N -1.457  9.971  -1.792 -2.732 -7.441 -1.624 H23 A1AWR 69 
A1AWR H22 H28 H  0 1 N N N N N N -0.855  10.939 -0.403 -3.436 -7.603 0.018  H22 A1AWR 70 
A1AWR H32 H29 H  0 1 N N N N N N 3.433   9.375  -5.905 6.989  0.825  -2.430 H32 A1AWR 71 
A1AWR H33 H30 H  0 1 N N N N N N 4.081   8.093  -6.984 7.932  -0.077 -1.219 H33 A1AWR 72 
A1AWR H31 H31 H  0 1 N N N N N N 2.461   8.801  -7.302 6.510  -0.829 -1.980 H31 A1AWR 73 
A1AWR H34 H32 H  0 1 N N N N N N 4.415   6.513  -5.190 7.677  1.441  0.642  H34 A1AWR 74 
A1AWR H29 H33 H  0 1 N N N N N N -1.112  8.168  1.781  -3.980 -4.070 -0.291 H29 A1AWR 75 
A1AWR H30 H34 H  0 1 N N N N N N 0.097   8.897  0.670  -4.469 -5.366 -1.408 H30 A1AWR 76 
A1AWR H28 H35 H  0 1 N N N N N N -0.863  9.946  1.768  -4.587 -5.616 0.350  H28 A1AWR 77 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AWR F3  C29 SING N N 1  
A1AWR O1  C15 DOUB N N 2  
A1AWR C27 C26 SING N N 3  
A1AWR CL1 C4  SING N N 4  
A1AWR F2  C29 SING N N 5  
A1AWR C29 C25 SING N N 6  
A1AWR C29 F4  SING N N 7  
A1AWR C26 C25 DOUB Y N 8  
A1AWR C26 C28 SING Y N 9  
A1AWR C11 C10 SING N N 10 
A1AWR C11 N6  SING N N 11 
A1AWR C15 N6  SING N N 12 
A1AWR C15 C16 SING N N 13 
A1AWR C25 C2  SING Y N 14 
A1AWR C10 N5  SING N N 15 
A1AWR N6  C12 SING N N 16 
A1AWR C4  C5  DOUB Y N 17 
A1AWR C4  C3  SING Y N 18 
A1AWR C28 C1  DOUB Y N 19 
A1AWR C17 C16 SING N N 20 
A1AWR C5  C6  SING Y N 21 
A1AWR C2  C3  SING N N 22 
A1AWR C2  N2  DOUB Y N 23 
A1AWR C3  C24 DOUB Y N 24 
A1AWR C1  N2  SING Y N 25 
A1AWR C1  N1  SING N N 26 
A1AWR C12 C13 SING N N 27 
A1AWR N5  C13 SING N N 28 
A1AWR N5  C9  SING N N 29 
A1AWR C6  C9  DOUB Y N 30 
A1AWR C6  C7  SING Y N 31 
A1AWR C13 C14 SING N N 32 
A1AWR C9  N4  SING Y N 33 
A1AWR C24 C7  SING Y N 34 
A1AWR C24 F1  SING N N 35 
A1AWR C7  N3  DOUB Y N 36 
A1AWR N4  C8  DOUB Y N 37 
A1AWR N3  C8  SING Y N 38 
A1AWR C8  O2  SING N N 39 
A1AWR C20 C21 SING N N 40 
A1AWR C20 N7  SING N N 41 
A1AWR C21 C22 SING N N 42 
A1AWR C22 C19 SING N N 43 
A1AWR O2  C18 SING N N 44 
A1AWR N7  C19 SING N N 45 
A1AWR N7  C23 SING N N 46 
A1AWR C19 C18 SING N N 47 
A1AWR N1  H2  SING N N 48 
A1AWR N1  H1  SING N N 49 
A1AWR C5  H3  SING N N 50 
A1AWR C11 H6  SING N N 51 
A1AWR C11 H7  SING N N 52 
A1AWR C12 H8  SING N N 53 
A1AWR C12 H9  SING N N 54 
A1AWR C21 H24 SING N N 55 
A1AWR C21 H25 SING N N 56 
A1AWR C22 H27 SING N N 57 
A1AWR C22 H26 SING N N 58 
A1AWR C10 H4  SING N N 59 
A1AWR C10 H5  SING N N 60 
A1AWR C14 H12 SING N N 61 
A1AWR C14 H13 SING N N 62 
A1AWR C14 H11 SING N N 63 
A1AWR C16 H14 SING N N 64 
A1AWR C16 H15 SING N N 65 
A1AWR C19 H21 SING N N 66 
A1AWR C18 H19 SING N N 67 
A1AWR C18 H20 SING N N 68 
A1AWR C17 H17 SING N N 69 
A1AWR C17 H18 SING N N 70 
A1AWR C17 H16 SING N N 71 
A1AWR C13 H10 SING N N 72 
A1AWR C20 H23 SING N N 73 
A1AWR C20 H22 SING N N 74 
A1AWR C27 H32 SING N N 75 
A1AWR C27 H33 SING N N 76 
A1AWR C27 H31 SING N N 77 
A1AWR C28 H34 SING N N 78 
A1AWR C23 H29 SING N N 79 
A1AWR C23 H30 SING N N 80 
A1AWR C23 H28 SING N N 81 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AWR SMILES           ACDLabs              12.01 "CN1CCCC1COc1nc2c(F)c(c3nc(N)cc(C)c3C(F)(F)F)c(Cl)cc2c(n1)N1CCN(CC1C)C(=O)CC"                                                                                                                                                
A1AWR InChI            InChI                1.06  "InChI=1S/C29H34ClF4N7O2/c1-5-21(42)40-9-10-41(16(3)13-40)27-18-12-19(30)22(26-23(29(32,33)34)15(2)11-20(35)36-26)24(31)25(18)37-28(38-27)43-14-17-7-6-8-39(17)4/h11-12,16-17H,5-10,13-14H2,1-4H3,(H2,35,36)/t16-,17-/m0/s1" 
A1AWR InChIKey         InChI                1.06  QEAJZIRHKLXVLR-IRXDYDNUSA-N                                                                                                                                                                                                  
A1AWR SMILES_CANONICAL CACTVS               3.385 "CCC(=O)N1CCN([C@@H](C)C1)c2nc(OC[C@@H]3CCCN3C)nc4c(F)c(c(Cl)cc24)c5nc(N)cc(C)c5C(F)(F)F"                                                                                                                                    
A1AWR SMILES           CACTVS               3.385 "CCC(=O)N1CCN([CH](C)C1)c2nc(OC[CH]3CCCN3C)nc4c(F)c(c(Cl)cc24)c5nc(N)cc(C)c5C(F)(F)F"                                                                                                                                        
A1AWR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCN([C@H](C1)C)c2c3cc(c(c(c3nc(n2)OC[C@@H]4CCCN4C)F)c5c(c(cc(n5)N)C)C(F)(F)F)Cl"                                                                                                                                   
A1AWR SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCN(C(C1)C)c2c3cc(c(c(c3nc(n2)OCC4CCCN4C)F)c5c(c(cc(n5)N)C)C(F)(F)F)Cl"                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AWR "SYSTEMATIC NAME" ACDLabs              12.01 "1-{(3S)-4-[(7M)-7-[6-amino-4-methyl-3-(trifluoromethyl)pyridin-2-yl]-6-chloro-8-fluoro-2-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}quinazolin-4-yl]-3-methylpiperazin-1-yl}propan-1-one"          
A1AWR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[(3~{S})-4-[7-[6-azanyl-4-methyl-3-(trifluoromethyl)pyridin-2-yl]-6-chloranyl-8-fluoranyl-2-[[(2~{S})-1-methylpyrrolidin-2-yl]methoxy]quinazolin-4-yl]-3-methyl-piperazin-1-yl]propan-1-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AWR "Create component" 2024-07-05 RCSB 
A1AWR "Modify PCM"       2024-09-27 PDBE 
A1AWR "Initial release"  2024-12-11 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      A1AWR 
_pdbx_chem_comp_synonyms.name         "divarasib, bound form" 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            A1AWR 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C17 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
