data_9TR
#

_chem_comp.id                                   9TR
_chem_comp.name                                 "N6-{[(3-azidophenyl)methoxy]carbonyl}-L-lysine"
_chem_comp.type                                 "peptide linking"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C14 H19 N5 O4"
_chem_comp.mon_nstd_parent_comp_id              LYS
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-07-31
_chem_comp.pdbx_modified_date                   2019-04-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       321.332
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9TR
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6AAC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9TR  C15  C1   C   0  1  Y  N  N  263.687  47.575  139.863   4.071  -0.931  -0.011  C15  9TR   1  
9TR  C17  C2   C   0  1  Y  N  N  263.718  49.633  138.503   5.934   0.584   0.133  C17  9TR   2  
9TR  C21  C3   C   0  1  Y  N  N  263.840  48.878  137.407   6.422   0.093  -1.105  C21  9TR   3  
9TR  C22  C4   C   0  1  Y  N  N  263.907  47.520  137.505   5.738  -0.889  -1.758  C22  9TR   4  
9TR  O    O1   O   0  1  N  N  N  255.305  50.072  144.720  -8.567   0.823  -1.209  O    9TR   5  
9TR  C    C5   C   0  1  N  N  N  256.432  50.360  145.454  -7.906   1.085  -0.232  C    9TR   6  
9TR  OXT  O2   O   0  1  N  Y  N  256.513  51.600  146.020  -8.090   2.248   0.411  OXT  9TR   7  
9TR  CA   C6   C   0  1  N  N  S  257.636  49.383  145.674  -6.874   0.105   0.264  CA   9TR   8  
9TR  N    N1   N   0  1  N  N  N  258.082  49.546  147.084  -7.173  -1.232  -0.267  N    9TR   9  
9TR  CB   C7   C   0  1  N  N  N  257.421  47.887  145.321  -5.486   0.542  -0.208  CB   9TR  10  
9TR  CG   C8   C   0  1  N  N  N  257.530  47.452  143.841  -4.427  -0.381   0.398  CG   9TR  11  
9TR  CD   C9   C   0  1  N  N  N  259.008  47.251  143.492  -3.039   0.057  -0.075  CD   9TR  12  
9TR  CE   C10  C   0  1  N  N  N  259.250  46.930  142.054  -1.980  -0.866   0.532  CE   9TR  13  
9TR  NZ   N2   N   0  1  N  N  N  260.518  47.600  141.781  -0.651  -0.447   0.079  NZ   9TR  14  
9TR  C11  C11  C   0  1  N  N  N  261.674  46.789  142.096   0.443  -1.119   0.489  C11  9TR  15  
9TR  O12  O3   O   0  1  N  N  N  261.423  45.677  142.282   0.327  -2.072   1.234  O12  9TR  16  
9TR  O13  O4   O   0  1  N  N  N  262.977  47.166  142.146   1.665  -0.734   0.073  O13  9TR  17  
9TR  C14  C12  C   0  1  N  N  N  263.664  46.624  141.012   2.798  -1.504   0.555  C14  9TR  18  
9TR  C16  C13  C   0  1  Y  N  N  263.619  49.001  139.785   4.736   0.047   0.669  C16  9TR  19  
9TR  N18  N3   N   0  1  N  N  N  263.651  51.037  138.171   6.592   1.533   0.783  N18  9TR  20  
9TR  N19  N4   N   1  1  N  N  N  263.507  51.815  139.019   7.541   1.954   0.352  N19  9TR  21  
9TR  N20  N5   N  -1  1  N  N  N  263.381  52.664  139.921   8.490   2.376  -0.078  N20  9TR  22  
9TR  C23  C14  C   0  1  Y  N  N  263.862  46.875  138.709   4.565  -1.404  -1.220  C23  9TR  23  
9TR  H21  H1   H   0  1  N  N  N  263.886  49.348  136.436   7.333   0.492  -1.526  H1   9TR  24  
9TR  H22  H2   H   0  1  N  N  N  263.999  46.935  136.602   6.106  -1.265  -2.701  H2   9TR  25  
9TR  HXT  H3   H   0  1  N  Y  N  255.733  52.098  145.806  -8.763   2.845   0.055  H3   9TR  26  
9TR  H4   H4   H   0  1  N  N  N  258.451  49.744  145.029  -6.895   0.076   1.354  H4   9TR  27  
9TR  H    H5   H   0  1  N  N  N  258.212  50.517  147.283  -7.160  -1.232  -1.276  H5   9TR  28  
9TR  H2   H6   H   0  1  N  Y  N  257.388  49.170  147.698  -6.534  -1.919   0.103  H6   9TR  29  
9TR  H8   H8   H   0  1  N  N  N  256.413  47.614  145.666  -5.438   0.485  -1.296  H8   9TR  30  
9TR  H9   H9   H   0  1  N  N  N  258.169  47.310  145.884  -5.300   1.567   0.111  H9   9TR  31  
9TR  H10  H10  H   0  1  N  N  N  257.100  48.231  143.194  -4.475  -0.324   1.485  H10  9TR  32  
9TR  H11  H11  H   0  1  N  N  N  256.984  46.509  143.692  -4.613  -1.406   0.079  H11  9TR  33  
9TR  H12  H12  H   0  1  N  N  N  259.399  46.424  144.102  -2.991   0.000  -1.162  H12  9TR  34  
9TR  H13  H13  H   0  1  N  N  N  259.551  48.176  143.737  -2.853   1.082   0.244  H13  9TR  35  
9TR  H14  H14  H   0  1  N  N  N  258.446  47.329  141.418  -2.028  -0.809   1.619  H14  9TR  36  
9TR  H15  H15  H   0  1  N  N  N  259.334  45.844  141.899  -2.166  -1.891   0.213  H15  9TR  37  
9TR  H16  H16  H   0  1  N  N  N  260.581  48.528  141.413  -0.558   0.314  -0.515  H16  9TR  38  
9TR  H17  H17  H   0  1  N  N  N  263.156  45.700  140.698   2.694  -2.541   0.237  H17  9TR  39  
9TR  H18  H18  H   0  1  N  N  N  264.700  46.393  141.302   2.831  -1.459   1.643  H18  9TR  40  
9TR  H19  H19  H   0  1  N  N  N  263.495  49.593  140.680   4.352   0.410   1.611  H19  9TR  41  
9TR  H23  H21  H   0  1  N  N  N  263.966  45.801  138.745   4.032  -2.182  -1.747  H21  9TR  42  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9TR  C21  C22  DOUB  Y  N   1  
9TR  C21  C17  SING  Y  N   2  
9TR  C22  C23  SING  Y  N   3  
9TR  N18  C17  SING  N  N   4  
9TR  N18  N19  DOUB  N  N   5  
9TR  C17  C16  DOUB  Y  N   6  
9TR  C23  C15  DOUB  Y  N   7  
9TR  N19  N20  DOUB  N  N   8  
9TR  C16  C15  SING  Y  N   9  
9TR  C15  C14  SING  N  N  10  
9TR  C14  O13  SING  N  N  11  
9TR  NZ   CE   SING  N  N  12  
9TR  NZ   C11  SING  N  N  13  
9TR  CE   CD   SING  N  N  14  
9TR  C11  O13  SING  N  N  15  
9TR  C11  O12  DOUB  N  N  16  
9TR  CD   CG   SING  N  N  17  
9TR  CG   CB   SING  N  N  18  
9TR  O    C    DOUB  N  N  19  
9TR  CB   CA   SING  N  N  20  
9TR  C    CA   SING  N  N  21  
9TR  C    OXT  SING  N  N  22  
9TR  CA   N    SING  N  N  23  
9TR  C21  H21  SING  N  N  24  
9TR  C22  H22  SING  N  N  25  
9TR  OXT  HXT  SING  N  N  26  
9TR  CA   H4   SING  N  N  27  
9TR  N    H    SING  N  N  28  
9TR  N    H2   SING  N  N  29  
9TR  CB   H8   SING  N  N  30  
9TR  CB   H9   SING  N  N  31  
9TR  CG   H10  SING  N  N  32  
9TR  CG   H11  SING  N  N  33  
9TR  CD   H12  SING  N  N  34  
9TR  CD   H13  SING  N  N  35  
9TR  CE   H14  SING  N  N  36  
9TR  CE   H15  SING  N  N  37  
9TR  NZ   H16  SING  N  N  38  
9TR  C14  H17  SING  N  N  39  
9TR  C14  H18  SING  N  N  40  
9TR  C16  H19  SING  N  N  41  
9TR  C23  H23  SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9TR  SMILES            ACDLabs               12.01  "c1(COC(NCCCCC(C(=O)O)N)=O)cc(ccc1)N=[N+]=[N-]"  
9TR  InChI             InChI                 1.03   "InChI=1S/C14H19N5O4/c15-12(13(20)21)6-1-2-7-17-14(22)23-9-10-4-3-5-11(8-10)18-19-16/h3-5,8,12H,1-2,6-7,9,15H2,(H,17,22)(H,20,21)/t12-/m0/s1"  
9TR  InChIKey          InChI                 1.03   HFCHIMDWTVTIEA-LBPRGKRZSA-N  
9TR  SMILES_CANONICAL  CACTVS                3.385  "N[C@@H](CCCCNC(=O)OCc1cccc(c1)N=[N+]=[N-])C(O)=O"  
9TR  SMILES            CACTVS                3.385  "N[CH](CCCCNC(=O)OCc1cccc(c1)N=[N+]=[N-])C(O)=O"  
9TR  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1cc(cc(c1)N=[N+]=[N-])COC(=O)NCCCC[C@@H](C(=O)O)N"  
9TR  SMILES            "OpenEye OEToolkits"  2.0.6  "c1cc(cc(c1)N=[N+]=[N-])COC(=O)NCCCCC(C(=O)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9TR  "SYSTEMATIC NAME"  ACDLabs               12.01  "N~6~-{[(3-azidophenyl)methoxy]carbonyl}-L-lysine"  
9TR  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(2~{S})-2-azanyl-6-[(3-azidophenyl)methoxycarbonylamino]hexanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9TR  "Create component"  2018-07-31  PDBJ  
9TR  "Initial release"   2019-04-17  RCSB  
##
