data_9SR
#

_chem_comp.id                                   9SR
_chem_comp.name                                 "(1R,5R,6R,7R,9S,11S,12S,13S,14S)-3-amino-14-(hydroxymethyl)-8,10-dioxa-2,4-diazatetracyclo[7.3.1.1~7,11~.0~1,6~]tetradec-3-ene-5,9,12,13,14-pentol (non-preferred name)"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H17 N3 O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Tetrodotoxin
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-07-18
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       319.268
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9SR
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6A95
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9SR  N12  N1   N  0  1  N  N  N  177.777  178.794  189.741   2.010  -0.635   1.244  N12  9SR   1  
9SR  C13  C1   C  0  1  N  N  N  176.880  178.456  188.675   3.102   0.019   0.718  C13  9SR   2  
9SR  C15  C2   C  0  1  N  N  R  177.423  175.930  189.003   1.707   1.397  -0.720  C15  9SR   3  
9SR  C17  C3   C  0  1  N  N  R  177.826  176.365  190.384   0.556   1.022   0.224  C17  9SR   4  
9SR  C21  C4   C  0  1  N  N  N  179.908  174.868  193.356  -3.274   1.055  -0.205  C21  9SR   5  
9SR  C02  C5   C  0  1  N  N  S  179.452  177.177  192.625  -1.761  -0.670   0.801  C02  9SR   6  
9SR  C03  C6   C  0  1  N  N  S  178.917  175.834  192.488  -1.916   0.817   0.459  C03  9SR   7  
9SR  C05  C7   C  0  1  N  N  R  178.842  175.432  191.086  -0.783   1.215  -0.493  C05  9SR   8  
9SR  C07  C8   C  0  1  N  N  S  180.727  176.884  190.590  -0.725  -1.040  -1.338  C07  9SR   9  
9SR  C09  C9   C  0  1  N  N  S  179.977  177.891  189.852   0.641  -1.298  -0.686  C09  9SR  10  
9SR  C11  C10  C  0  1  N  N  R  178.469  177.804  190.412   0.711  -0.461   0.594  C11  9SR  11  
9SR  C19  C11  C  0  1  N  N  S  178.524  178.183  191.919  -0.426  -0.873   1.528  C19  9SR  12  
9SR  N14  N2   N  0  1  N  N  N  176.689  177.029  188.304   2.983   0.952  -0.169  N14  9SR  13  
9SR  N18  N3   N  0  1  N  N  N  176.212  179.496  187.951   4.359  -0.331   1.150  N18  9SR  14  
9SR  O01  O1   O  0  1  N  N  N  180.698  177.309  191.990  -1.751  -1.417  -0.419  O01  9SR  15  
9SR  O04  O2   O  0  1  N  N  N  177.641  175.815  193.038  -1.820   1.599   1.652  O04  9SR  16  
9SR  O06  O3   O  0  1  N  N  N  180.075  175.602  190.412  -0.842   0.354  -1.634  O06  9SR  17  
9SR  O08  O4   O  0  1  N  N  N  182.039  176.818  190.166  -0.841  -1.816  -2.532  O08  9SR  18  
9SR  O10  O5   O  0  1  N  N  N  180.083  177.695  188.492   1.686  -0.907  -1.579  O10  9SR  19  
9SR  O16  O6   O  0  1  N  N  N  176.626  174.803  189.000   1.741   2.816  -0.883  O16  9SR  20  
9SR  O20  O7   O  0  1  N  N  N  179.048  179.408  192.005  -0.278  -2.249   1.883  O20  9SR  21  
9SR  O22  O8   O  0  1  N  N  N  179.752  173.555  192.938  -4.317   0.664   0.690  O22  9SR  22  
9SR  H1   H1   H  0  1  N  N  N  178.343  175.726  188.435   1.546   0.926  -1.690  H1   9SR  23  
9SR  H2   H2   H  0  1  N  N  N  176.921  176.400  191.009   0.597   1.638   1.123  H2   9SR  24  
9SR  H3   H3   H  0  1  N  N  N  180.952  175.180  193.203  -3.380   2.113  -0.447  H3   9SR  25  
9SR  H4   H4   H  0  1  N  N  N  179.654  174.946  194.424  -3.339   0.465  -1.120  H4   9SR  26  
9SR  H5   H5   H  0  1  N  N  N  179.526  177.447  193.689  -2.584  -0.993   1.439  H5   9SR  27  
9SR  H6   H6   H  0  1  N  N  N  178.490  174.393  191.006  -0.893   2.257  -0.793  H6   9SR  28  
9SR  H7   H7   H  0  1  N  N  N  180.362  178.886  190.119   0.739  -2.356  -0.441  H7   9SR  29  
9SR  H8   H8   H  0  1  N  N  N  177.514  178.120  192.350  -0.400  -0.259   2.427  H8   9SR  30  
9SR  H10  H10  H  0  1  N  N  N  175.609  179.266  187.187   4.466  -1.028   1.816  H10  9SR  31  
9SR  H11  H11  H  0  1  N  N  N  176.348  180.452  188.210   5.139   0.120   0.790  H11  9SR  32  
9SR  H12  H12  H  0  1  N  N  N  177.685  176.076  193.950  -2.492   1.389   2.315  H12  9SR  33  
9SR  H13  H13  H  0  1  N  N  N  182.500  176.154  190.665  -1.685  -1.709  -2.991  H13  9SR  34  
9SR  H14  H14  H  0  1  N  N  N  180.995  177.760  188.232   1.697  -1.401  -2.410  H14  9SR  35  
9SR  H15  H15  H  0  1  N  N  N  177.078  174.094  189.441   2.445   3.128  -1.469  H15  9SR  36  
9SR  H16  H16  H  0  1  N  N  N  179.095  179.669  192.917  -0.968  -2.578   2.476  H16  9SR  37  
9SR  H17  H17  H  0  1  N  N  N  180.328  172.991  193.442  -5.207   0.787   0.333  H17  9SR  38  
9SR  H18  H18  H  0  1  N  N  N  177.903  179.752  190.000   2.102  -1.202   2.026  H18  9SR  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9SR  N18  C13  SING  N  N   1  
9SR  N14  C13  DOUB  N  N   2  
9SR  N14  C15  SING  N  N   3  
9SR  O10  C09  SING  N  N   4  
9SR  C13  N12  SING  N  N   5  
9SR  O16  C15  SING  N  N   6  
9SR  C15  C17  SING  N  N   7  
9SR  N12  C11  SING  N  N   8  
9SR  C09  C11  SING  N  N   9  
9SR  C09  C07  SING  N  N  10  
9SR  O08  C07  SING  N  N  11  
9SR  C17  C11  SING  N  N  12  
9SR  C17  C05  SING  N  N  13  
9SR  C11  C19  SING  N  N  14  
9SR  O06  C07  SING  N  N  15  
9SR  O06  C05  SING  N  N  16  
9SR  C07  O01  SING  N  N  17  
9SR  C05  C03  SING  N  N  18  
9SR  C19  O20  SING  N  N  19  
9SR  C19  C02  SING  N  N  20  
9SR  O01  C02  SING  N  N  21  
9SR  C03  C02  SING  N  N  22  
9SR  C03  O04  SING  N  N  23  
9SR  C03  C21  SING  N  N  24  
9SR  O22  C21  SING  N  N  25  
9SR  C15  H1   SING  N  N  26  
9SR  C17  H2   SING  N  N  27  
9SR  C21  H3   SING  N  N  28  
9SR  C21  H4   SING  N  N  29  
9SR  C02  H5   SING  N  N  30  
9SR  C05  H6   SING  N  N  31  
9SR  C09  H7   SING  N  N  32  
9SR  C19  H8   SING  N  N  33  
9SR  N18  H10  SING  N  N  34  
9SR  N18  H11  SING  N  N  35  
9SR  O04  H12  SING  N  N  36  
9SR  O08  H13  SING  N  N  37  
9SR  O10  H14  SING  N  N  38  
9SR  O16  H15  SING  N  N  39  
9SR  O20  H16  SING  N  N  40  
9SR  O22  H17  SING  N  N  41  
9SR  N12  H18  SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9SR  SMILES            ACDLabs               12.01  "N1C32C(C(N=C1N)O)C4C(CO)(C(C2O)OC(C3O)(O4)O)O"  
9SR  InChI             InChI                 1.03   "InChI=1S/C11H17N3O8/c12-8-13-6(17)2-4-9(19,1-15)5-3(16)10(2,14-8)7(18)11(20,21-4)22-5/h2-7,15-20H,1H2,(H3,12,13,14)/t2-,3-,4-,5+,6-,7+,9+,10-,11+/m1/s1"  
9SR  InChIKey          InChI                 1.03   CFMYXEVWODSLAX-QOZOJKKESA-N  
9SR  SMILES_CANONICAL  CACTVS                3.385  "NC1=N[C@H](O)[C@H]2[C@H]3O[C@]4(O)O[C@@H]([C@@H](O)[C@@]2(N1)[C@@H]4O)[C@]3(O)CO"  
9SR  SMILES            CACTVS                3.385  "NC1=N[CH](O)[CH]2[CH]3O[C]4(O)O[CH]([CH](O)[C]2(N1)[CH]4O)[C]3(O)CO"  
9SR  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C([C@@]1([C@H]2[C@@H]3[C@H](N=C(N[C@@]34[C@@H]([C@@H]1O[C@]([C@H]4O)(O2)O)O)N)O)O)O"  
9SR  SMILES            "OpenEye OEToolkits"  2.0.6  "C(C1(C2C3C(N=C(NC34C(C1OC(C4O)(O2)O)O)N)O)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          9SR
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          ACDLabs
_pdbx_chem_comp_identifier.program_version  12.01
_pdbx_chem_comp_identifier.identifier       "(1R,5R,6R,7R,9S,11S,12S,13S,14S)-3-amino-14-(hydroxymethyl)-8,10-dioxa-2,4-diazatetracyclo[7.3.1.1~7,11~.0~1,6~]tetradec-3-ene-5,9,12,13,14-pentol (non-preferred name)"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9SR  "Other modification"  2018-07-18  PDBJ  
9SR  "Initial release"     2018-08-08  RCSB  
9SR  "Modify synonyms"     2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     9SR
_pdbx_chem_comp_synonyms.name        Tetrodotoxin
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
