data_Z3Q
#

_chem_comp.id                                   Z3Q
_chem_comp.name                                 "2-azidoethyl 2-acetamido-2-deoxy-beta-D-glucopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C10 H18 N4 O6"
_chem_comp.mon_nstd_parent_comp_id              NAG
_chem_comp.pdbx_synonyms                        
;2-azidoethyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranoside; 2-azidoethyl 2-acetamido-2-deoxy-beta-D-glucoside;
2-azidoethyl 2-acetamido-2-deoxy-D-glucoside; 2-azidoethyl 2-acetamido-2-deoxy-glucoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-12-20
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       290.273
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Z3Q
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3NBE
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  Z3Q  "2-azidoethyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranoside"  PDB  ?  
2  Z3Q  "2-azidoethyl 2-acetamido-2-deoxy-beta-D-glucoside"            PDB  ?  
3  Z3Q  "2-azidoethyl 2-acetamido-2-deoxy-D-glucoside"                 PDB  ?  
4  Z3Q  "2-azidoethyl 2-acetamido-2-deoxy-glucoside"                   PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Z3Q  C1    C1    C   0  1  N  N  R   -7.332   -6.575  52.993   0.286  -0.263  -0.223  C1    Z3Q   1  
Z3Q  C11   C11   C   0  1  N  N  N   -7.181   -7.270  55.303  -1.616  -1.708  -0.018  C11   Z3Q   2  
Z3Q  C12   C12   C   0  1  N  N  N   -7.479   -8.512  56.154  -2.984  -1.824   0.657  C12   Z3Q   3  
Z3Q  C2    C2    C   0  1  N  N  R   -7.566   -7.138  51.587   0.789   1.136   0.141  C2    Z3Q   4  
Z3Q  C7    C21   C   0  1  N  N  N   -6.398   -9.365  51.299  -1.222   2.508   0.248  C7    Z3Q   5  
Z3Q  C8    C2M   C   0  1  N  N  N   -7.567  -10.102  51.747  -2.149   3.544  -0.334  C8    Z3Q   6  
Z3Q  C3    C3    C   0  1  N  N  R   -7.658   -5.999  50.547   2.196   1.329  -0.432  C3    Z3Q   7  
Z3Q  C4    C4    C   0  1  N  N  S   -8.579   -4.870  50.993   3.111   0.225   0.106  C4    Z3Q   8  
Z3Q  C5    C5    C   0  1  N  N  R   -8.413   -4.508  52.472   2.518  -1.140  -0.257  C5    Z3Q   9  
Z3Q  C6    C6    C   0  1  N  N  N   -9.577   -3.683  52.980   3.394  -2.249   0.328  C6    Z3Q  10  
Z3Q  N1A   N1A   N   0  1  N  N  N   -8.948   -8.575  56.454  -3.873  -0.780   0.140  N1A   Z3Q  11  
Z3Q  N1B   N1B   N   1  1  N  N  N   -9.221   -7.377  57.426  -4.828  -1.063  -0.381  N1B   Z3Q  12  
Z3Q  N1C   N1C   N  -1  1  N  N  N   -9.946   -6.305  58.385  -5.783  -1.346  -0.902  N1C   Z3Q  13  
Z3Q  N2    N2    N   0  1  N  N  N   -6.409   -7.959  51.226  -0.113   2.143  -0.425  N2    Z3Q  14  
Z3Q  O1    O1    O   0  1  N  N  N   -7.394   -7.638  53.926  -1.004  -0.472   0.355  O1    Z3Q  15  
Z3Q  O7    O21   O   0  1  N  N  N   -5.427  -10.114  51.004  -1.474   2.003   1.322  O7    Z3Q  16  
Z3Q  O3    O3    O   0  1  N  N  N   -8.145   -6.488  49.289   2.703   2.605  -0.035  O3    Z3Q  17  
Z3Q  O4    O4    O   0  1  N  N  N   -8.241   -3.686  50.194   4.409   0.353  -0.478  O4    Z3Q  18  
Z3Q  O5    O5    O   0  1  N  N  N   -8.351   -5.667  53.339   1.198  -1.242   0.280  O5    Z3Q  19  
Z3Q  O6    O6    O   0  1  N  N  N   -9.206   -3.019  54.157   2.908  -3.520  -0.107  O6    Z3Q  20  
Z3Q  H1    H1    H   0  1  N  N  N   -6.347   -6.087  53.025   0.217  -0.354  -1.307  H1    Z3Q  21  
Z3Q  H111  H111  H   0  0  N  N  N   -6.138   -6.952  55.452  -0.983  -2.537   0.300  H111  Z3Q  22  
Z3Q  H112  H112  H   0  0  N  N  N   -7.858   -6.449  55.583  -1.740  -1.740  -1.100  H112  Z3Q  23  
Z3Q  H121  H121  H   0  0  N  N  N   -7.179   -9.415  55.602  -3.412  -2.803   0.444  H121  Z3Q  24  
Z3Q  H122  H122  H   0  0  N  N  N   -6.915   -8.454  57.097  -2.870  -1.703   1.734  H122  Z3Q  25  
Z3Q  H2    H2    H   0  1  N  N  N   -8.491   -7.733  51.570   0.818   1.242   1.225  H2    Z3Q  26  
Z3Q  H82   H2M1  H   0  1  N  N  N   -7.824   -9.794  52.771  -2.984   3.707   0.347  H82   Z3Q  27  
Z3Q  H83   H2M2  H   0  1  N  N  N   -8.413   -9.890  51.077  -1.607   4.479  -0.475  H83   Z3Q  28  
Z3Q  H81   H2M3  H   0  1  N  N  N   -7.349  -11.180  51.732  -2.527   3.195  -1.295  H81   Z3Q  29  
Z3Q  HN2   H2N   H   0  1  N  N  N   -5.581   -7.496  50.910   0.089   2.547  -1.283  HN2   Z3Q  30  
Z3Q  H3    H3    H   0  1  N  N  N   -6.649   -5.584  50.410   2.158   1.274  -1.520  H3    Z3Q  31  
Z3Q  HO3   H3O   H   0  1  N  Y  N   -8.193   -5.771  48.667   3.592   2.795  -0.363  HO3   Z3Q  32  
Z3Q  H4    H4    H   0  1  N  N  N   -9.624   -5.161  50.809   3.188   0.311   1.190  H4    Z3Q  33  
Z3Q  HO4   H4O   H   0  1  N  Y  N   -8.800   -2.961  50.449   5.041  -0.316  -0.181  HO4   Z3Q  34  
Z3Q  H5    H5    H   0  1  N  N  N   -7.491   -3.918  52.583   2.478  -1.242  -1.342  H5    Z3Q  35  
Z3Q  H62   H61   H   0  1  N  N  N  -10.431   -4.344  53.187   4.422  -2.117  -0.011  H62   Z3Q  36  
Z3Q  H61   H62   H   0  1  N  N  N   -9.862   -2.944  52.217   3.362  -2.201   1.417  H61   Z3Q  37  
Z3Q  HO6   H6O   H   0  1  N  Y  N   -9.938   -2.502  54.474   3.417  -4.271   0.227  HO6   Z3Q  38  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Z3Q  C1   O1    SING  N  N   1  
Z3Q  C1   C2    SING  N  N   2  
Z3Q  C1   O5    SING  N  N   3  
Z3Q  C1   H1    SING  N  N   4  
Z3Q  C11  O1    SING  N  N   5  
Z3Q  C11  C12   SING  N  N   6  
Z3Q  C11  H111  SING  N  N   7  
Z3Q  C11  H112  SING  N  N   8  
Z3Q  C12  H121  SING  N  N   9  
Z3Q  C12  H122  SING  N  N  10  
Z3Q  C12  N1A   SING  N  N  11  
Z3Q  C2   N2    SING  N  N  12  
Z3Q  C2   H2    SING  N  N  13  
Z3Q  C2   C3    SING  N  N  14  
Z3Q  C7   N2    SING  N  N  15  
Z3Q  C7   O7    DOUB  N  N  16  
Z3Q  C7   C8    SING  N  N  17  
Z3Q  C8   H81   SING  N  N  18  
Z3Q  C8   H82   SING  N  N  19  
Z3Q  C8   H83   SING  N  N  20  
Z3Q  C3   C4    SING  N  N  21  
Z3Q  C3   O3    SING  N  N  22  
Z3Q  C3   H3    SING  N  N  23  
Z3Q  C4   H4    SING  N  N  24  
Z3Q  C4   C5    SING  N  N  25  
Z3Q  C4   O4    SING  N  N  26  
Z3Q  C5   H5    SING  N  N  27  
Z3Q  C5   C6    SING  N  N  28  
Z3Q  C5   O5    SING  N  N  29  
Z3Q  C6   O6    SING  N  N  30  
Z3Q  C6   H61   SING  N  N  31  
Z3Q  C6   H62   SING  N  N  32  
Z3Q  N1A  N1B   DOUB  N  N  33  
Z3Q  N1B  N1C   DOUB  N  N  34  
Z3Q  N2   HN2   SING  N  N  35  
Z3Q  O3   HO3   SING  N  N  36  
Z3Q  O4   HO4   SING  N  N  37  
Z3Q  O6   HO6   SING  N  N  38  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Z3Q  SMILES            ACDLabs               12.01  "O=C(NC1C(O)C(O)C(OC1OCC\N=[N+]=[N-])CO)C"  
Z3Q  InChI             InChI                 1.03   "InChI=1S/C10H18N4O6/c1-5(16)13-7-9(18)8(17)6(4-15)20-10(7)19-3-2-12-14-11/h6-10,15,17-18H,2-4H2,1H3,(H,13,16)/t6-,7-,8-,9-,10-/m1/s1"  
Z3Q  InChIKey          InChI                 1.03   DHQJPCIPZHPDSL-VVULQXIFSA-N  
Z3Q  SMILES_CANONICAL  CACTVS                3.370  "CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1OCCN=[N+]=[N-]"  
Z3Q  SMILES            CACTVS                3.370  "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1OCCN=[N+]=[N-]"  
Z3Q  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1OCCN=[N+]=[N-])CO)O)O"  
Z3Q  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(=O)NC1C(C(C(OC1OCCN=[N+]=[N-])CO)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Z3Q  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-azidoethyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranoside"  
Z3Q  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "N-[(2R,3R,4R,5S,6R)-2-(2-azidoethoxy)-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide"  
#
_pdbx_chem_comp_related.comp_id            Z3Q
_pdbx_chem_comp_related.related_comp_id    NAG
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  Z3Q  C1   NAG  C1   "Carbohydrate core"  
 2  Z3Q  C2   NAG  C2   "Carbohydrate core"  
 3  Z3Q  C7   NAG  C7   "Carbohydrate core"  
 4  Z3Q  C8   NAG  C8   "Carbohydrate core"  
 5  Z3Q  C3   NAG  C3   "Carbohydrate core"  
 6  Z3Q  C4   NAG  C4   "Carbohydrate core"  
 7  Z3Q  C5   NAG  C5   "Carbohydrate core"  
 8  Z3Q  C6   NAG  C6   "Carbohydrate core"  
 9  Z3Q  N2   NAG  N2   "Carbohydrate core"  
10  Z3Q  O1   NAG  O1   "Carbohydrate core"  
11  Z3Q  O7   NAG  O7   "Carbohydrate core"  
12  Z3Q  O3   NAG  O3   "Carbohydrate core"  
13  Z3Q  O4   NAG  O4   "Carbohydrate core"  
14  Z3Q  O5   NAG  O5   "Carbohydrate core"  
15  Z3Q  O6   NAG  O6   "Carbohydrate core"  
16  Z3Q  H1   NAG  H1   "Carbohydrate core"  
17  Z3Q  H2   NAG  H2   "Carbohydrate core"  
18  Z3Q  H82  NAG  H82  "Carbohydrate core"  
19  Z3Q  H83  NAG  H83  "Carbohydrate core"  
20  Z3Q  H81  NAG  H81  "Carbohydrate core"  
21  Z3Q  HN2  NAG  HN2  "Carbohydrate core"  
22  Z3Q  H3   NAG  H3   "Carbohydrate core"  
23  Z3Q  HO3  NAG  HO3  "Carbohydrate core"  
24  Z3Q  H4   NAG  H4   "Carbohydrate core"  
25  Z3Q  HO4  NAG  HO4  "Carbohydrate core"  
26  Z3Q  H5   NAG  H5   "Carbohydrate core"  
27  Z3Q  H62  NAG  H62  "Carbohydrate core"  
28  Z3Q  H61  NAG  H61  "Carbohydrate core"  
29  Z3Q  HO6  NAG  HO6  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
Z3Q  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
Z3Q  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
Z3Q  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
Z3Q  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Z3Q  "Create component"          2012-12-20  RCSB  
Z3Q  "Modify atom id"            2013-04-14  RCSB  
Z3Q  "Initial release"           2016-03-23  RCSB  
Z3Q  "Other modification"        2020-07-03  RCSB  
Z3Q  "Modify parent residue"     2020-07-17  RCSB  
Z3Q  "Modify name"               2020-07-17  RCSB  
Z3Q  "Modify synonyms"           2020-07-17  RCSB  
Z3Q  "Modify linking type"       2020-07-17  RCSB  
Z3Q  "Modify atom id"            2020-07-17  RCSB  
Z3Q  "Modify component atom id"  2020-07-17  RCSB  
Z3Q  "Modify leaving atom flag"  2020-07-17  RCSB  
##
