data_XQQ
# 
_chem_comp.id                                    XQQ 
_chem_comp.name                                  "4-[(4S)-8-amino-3-{(2S)-1-[(2E)-but-2-enoyl]pyrrolidin-2-yl}imidazo[1,5-a]pyrazin-1-yl]-N-(pyridin-2-yl)benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H25 N7 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "4-{(4S)-8-amino-3-[(2S)-1-(but-2-ynoyl)pyrrolidin-2-yl]imidazo[1,5-a]pyrazin-1-yl}-N-(pyridin-2-yl)benzamide" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-05 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        467.522 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XQQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FD9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XQQ N1  N1  N 0 1 N N N N N N 19.709 -3.324 -3.982  4.801   -1.033 -0.743 N1  XQQ 1  
XQQ N3  N2  N 0 1 Y N N N N N 14.439 0.535  -3.099  1.899   4.110  1.417  N3  XQQ 2  
XQQ C4  C1  C 0 1 N N N N N N 21.064 -2.962 -3.532  4.985   -1.761 -2.011 C4  XQQ 3  
XQQ C5  C2  C 0 1 Y N N N N N 17.901 -1.612 -3.901  3.250   0.839  -0.563 C5  XQQ 4  
XQQ C6  C3  C 0 1 Y N N N N N 16.322 -0.093 -4.429  1.643   2.021  0.352  C6  XQQ 5  
XQQ C7  C4  C 0 1 N N N N N N 19.479 -4.189 -4.988  4.812   -1.583 0.488  C7  XQQ 6  
XQQ C8  C5  C 0 1 Y N N N N N 17.272 -0.180 -5.458  1.116   0.848  -0.178 C8  XQQ 7  
XQQ C10 C6  C 0 1 Y N N N N N 15.150 0.685  -4.246  1.102   3.129  1.038  C10 XQQ 8  
XQQ C13 C7  C 0 1 N N N N N N 18.222 -4.442 -5.402  5.023   -3.030 0.644  C13 XQQ 9  
XQQ C15 C8  C 0 1 Y N N N N N 17.533 1.911  -6.799  -1.308  1.351  -0.451 C15 XQQ 10 
XQQ C17 C9  C 0 1 Y N N N N N 17.579 2.575  -8.004  -2.616  0.963  -0.430 C17 XQQ 11 
XQQ C20 C10 C 0 1 N N N N N N 17.486 2.632  -10.498 -4.364  -0.775 -0.079 C20 XQQ 12 
XQQ C21 C11 C 0 1 N N N N N N 16.557 -5.765 -6.715  5.249   -5.056 2.019  C21 XQQ 13 
XQQ C22 C12 C 0 1 Y N N N N N 16.677 2.539  -12.852 -6.673  -0.253 -0.253 C22 XQQ 14 
XQQ C24 C13 C 0 1 Y N N N N N 17.262 3.898  -14.710 -8.993  0.322  -0.329 C24 XQQ 15 
XQQ C26 C14 C 0 1 Y N N N N N 16.353 3.193  -15.469 -9.279  -0.995 0.006  C26 XQQ 16 
XQQ C1  C15 C 0 1 N N S N N N 18.672 -2.664 -3.165  4.608   0.394  -1.042 C1  XQQ 17 
XQQ C11 C16 C 0 1 Y N N N N N 17.328 0.536  -6.751  -0.300  0.430  -0.149 C11 XQQ 18 
XQQ C12 C17 C 0 1 Y N N N N N 14.846 -0.337 -2.175  3.213   4.073  1.165  C12 XQQ 19 
XQQ C14 C18 C 0 1 Y N N N N N 17.188 -0.154 -7.950  -0.633  -0.887 0.181  C14 XQQ 20 
XQQ C16 C19 C 0 1 Y N N N N N 17.228 0.512  -9.154  -1.942  -1.275 0.207  C16 XQQ 21 
XQQ C18 C20 C 0 1 Y N N N N N 17.437 1.886  -9.203  -2.950  -0.356 -0.106 C18 XQQ 22 
XQQ C19 C21 C 0 1 N N N N N N 17.860 -5.554 -6.010  5.034   -3.573 1.858  C19 XQQ 23 
XQQ C2  C22 C 0 1 N N N N N N 19.503 -2.146 -1.979  4.704   0.558  -2.573 C2  XQQ 24 
XQQ C23 C23 C 0 1 Y N N N N N 17.439 3.580  -13.385 -7.667  0.697  -0.459 C23 XQQ 25 
XQQ C25 C24 C 0 1 Y N N N N N 15.648 2.184  -14.864 -8.241  -1.884 0.201  C25 XQQ 26 
XQQ C3  C25 C 0 1 N N N N N N 20.810 -1.784 -2.622  5.509   -0.696 -3.007 C3  XQQ 27 
XQQ C9  C26 C 0 1 Y N N N N N 15.968 -1.113 -2.306  3.778   3.039  0.514  C9  XQQ 28 
XQQ N2  N3  N 0 1 Y N N N N N 18.237 -1.138 -5.133  2.139   0.168  -0.722 N2  XQQ 29 
XQQ N4  N4  N 0 1 N N N N N N 14.704 1.563  -5.136  -0.255  3.187  1.310  N4  XQQ 30 
XQQ N5  N5  N 0 1 N N N N N N 16.752 2.102  -11.520 -5.334  0.110  -0.381 N5  XQQ 31 
XQQ N6  N6  N 0 1 Y N N N N N 15.792 1.843  -13.573 -6.986  -1.498 0.070  N6  XQQ 32 
XQQ N7  N7  N 0 1 Y N N N N N 16.732 -1.002 -3.458  2.998   1.987  0.093  N7  XQQ 33 
XQQ O1  O1  O 0 1 N N N N N N 20.435 -4.768 -5.489  4.649   -0.882 1.469  O1  XQQ 34 
XQQ O2  O2  O 0 1 N N N N N N 18.122 3.676  -10.593 -4.654  -1.918 0.217  O2  XQQ 35 
XQQ H10 H1  H 0 1 N N N N N N 21.535 -3.792 -2.984  5.719   -2.558 -1.888 H10 XQQ 36 
XQQ H9  H2  H 0 1 N N N N N N 21.701 -2.676 -4.382  4.035   -2.169 -2.356 H9  XQQ 37 
XQQ H13 H3  H 0 1 N N N N N N 17.467 -3.690 -5.225  5.168   -3.652 -0.227 H13 XQQ 38 
XQQ H15 H4  H 0 1 N N N N N N 17.658 2.464  -5.880  -1.050  2.368  -0.706 H15 XQQ 39 
XQQ H17 H5  H 0 1 N N N N N N 17.727 3.645  -8.018  -3.395  1.675  -0.663 H17 XQQ 40 
XQQ H20 H6  H 0 1 N N N N N N 16.524 -6.784 -7.129  5.227   -5.314 3.078  H20 XQQ 41 
XQQ H21 H7  H 0 1 N N N N N N 15.729 -5.632 -6.003  4.460   -5.596 1.496  H21 XQQ 42 
XQQ H19 H8  H 0 1 N N N N N N 16.459 -5.034 -7.531  6.217   -5.330 1.599  H19 XQQ 43 
XQQ H23 H9  H 0 1 N N N N N N 17.834 4.699  -15.156 -9.787  1.038  -0.483 H23 XQQ 44 
XQQ H25 H10 H 0 1 N N N N N N 16.200 3.429  -16.512 -10.304 -1.319 0.116  H25 XQQ 45 
XQQ H4  H11 H 0 1 N N N N N N 17.970 -3.423 -2.791  5.384   0.983  -0.554 H4  XQQ 46 
XQQ H12 H12 H 0 1 N N N N N N 14.259 -0.437 -1.274  3.835   4.894  1.490  H12 XQQ 47 
XQQ H14 H13 H 0 1 N N N N N N 17.046 -1.225 -7.937  0.145   -1.599 0.415  H14 XQQ 48 
XQQ H16 H14 H 0 1 N N N N N N 17.095 -0.040 -10.073 -2.199  -2.293 0.462  H16 XQQ 49 
XQQ H18 H15 H 0 1 N N N N N N 18.559 -6.378 -5.998  4.889   -2.951 2.729  H18 XQQ 50 
XQQ H5  H16 H 0 1 N N N N N N 19.031 -1.266 -1.519  3.712   0.555  -3.024 H5  XQQ 51 
XQQ H6  H17 H 0 1 N N N N N N 19.639 -2.929 -1.218  5.241   1.472  -2.830 H6  XQQ 52 
XQQ H22 H18 H 0 1 N N N N N N 18.147 4.120  -12.774 -7.409  1.713  -0.718 H22 XQQ 53 
XQQ H24 H19 H 0 1 N N N N N N 14.936 1.632  -15.460 -8.459  -2.909 0.462  H24 XQQ 54 
XQQ H8  H20 H 0 1 N N N N N N 21.608 -1.682 -1.871  6.579   -0.536 -2.881 H8  XQQ 55 
XQQ H7  H21 H 0 1 N N N N N N 20.725 -0.849 -3.196  5.274   -0.974 -4.035 H7  XQQ 56 
XQQ H11 H22 H 0 1 N N N N N N 16.253 -1.801 -1.524  4.841   3.034  0.323  H11 XQQ 57 
XQQ H1  H23 H 0 1 N N N N N N 13.869 1.992  -4.792  -0.792  2.380  1.271  H1  XQQ 58 
XQQ H2  H24 H 0 1 N N N N N N 15.400 2.264  -5.290  -0.668  4.034  1.541  H2  XQQ 59 
XQQ H3  H25 H 0 1 N N N N N N 16.198 1.302  -11.291 -5.100  1.000  -0.687 H3  XQQ 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XQQ C26 C25 DOUB Y N 1  
XQQ C26 C24 SING Y N 2  
XQQ C25 N6  SING Y N 3  
XQQ C24 C23 DOUB Y N 4  
XQQ N6  C22 DOUB Y N 5  
XQQ C23 C22 SING Y N 6  
XQQ C22 N5  SING N N 7  
XQQ N5  C20 SING N N 8  
XQQ O2  C20 DOUB N N 9  
XQQ C20 C18 SING N N 10 
XQQ C18 C16 DOUB Y N 11 
XQQ C18 C17 SING Y N 12 
XQQ C16 C14 SING Y N 13 
XQQ C17 C15 DOUB Y N 14 
XQQ C14 C11 DOUB Y N 15 
XQQ C15 C11 SING Y N 16 
XQQ C11 C8  SING N N 17 
XQQ C21 C19 SING N N 18 
XQQ C19 C13 DOUB N E 19 
XQQ O1  C7  DOUB N N 20 
XQQ C8  N2  SING Y N 21 
XQQ C8  C6  DOUB Y N 22 
XQQ C13 C7  SING N N 23 
XQQ N4  C10 SING N N 24 
XQQ N2  C5  DOUB Y N 25 
XQQ C7  N1  SING N N 26 
XQQ C6  C10 SING Y N 27 
XQQ C6  N7  SING Y N 28 
XQQ C10 N3  DOUB Y N 29 
XQQ N1  C4  SING N N 30 
XQQ N1  C1  SING N N 31 
XQQ C5  N7  SING Y N 32 
XQQ C5  C1  SING N N 33 
XQQ C4  C3  SING N N 34 
XQQ N7  C9  SING Y N 35 
XQQ C1  C2  SING N N 36 
XQQ N3  C12 SING Y N 37 
XQQ C3  C2  SING N N 38 
XQQ C9  C12 DOUB Y N 39 
XQQ C4  H10 SING N N 40 
XQQ C4  H9  SING N N 41 
XQQ C13 H13 SING N N 42 
XQQ C15 H15 SING N N 43 
XQQ C17 H17 SING N N 44 
XQQ C21 H20 SING N N 45 
XQQ C21 H21 SING N N 46 
XQQ C21 H19 SING N N 47 
XQQ C24 H23 SING N N 48 
XQQ C26 H25 SING N N 49 
XQQ C1  H4  SING N N 50 
XQQ C12 H12 SING N N 51 
XQQ C14 H14 SING N N 52 
XQQ C16 H16 SING N N 53 
XQQ C19 H18 SING N N 54 
XQQ C2  H5  SING N N 55 
XQQ C2  H6  SING N N 56 
XQQ C23 H22 SING N N 57 
XQQ C25 H24 SING N N 58 
XQQ C3  H8  SING N N 59 
XQQ C3  H7  SING N N 60 
XQQ C9  H11 SING N N 61 
XQQ N4  H1  SING N N 62 
XQQ N4  H2  SING N N 63 
XQQ N5  H3  SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XQQ SMILES           ACDLabs              12.01 "O=C(\C=C\C)N1CCCC1c1nc(c2ccc(cc2)C(=O)Nc2ccccn2)c2n1ccnc2N"                                                                                                                                                  
XQQ InChI            InChI                1.06  "InChI=1S/C26H25N7O2/c1-2-6-21(34)32-15-5-7-19(32)25-31-22(23-24(27)29-14-16-33(23)25)17-9-11-18(12-10-17)26(35)30-20-8-3-4-13-28-20/h2-4,6,8-14,16,19H,5,7,15H2,1H3,(H2,27,29)(H,28,30,35)/b6-2+/t19-/m0/s1" 
XQQ InChIKey         InChI                1.06  VSFINVOSLLRTIP-JYFUDLLOSA-N                                                                                                                                                                                   
XQQ SMILES_CANONICAL CACTVS               3.385 "C\C=C\C(=O)N1CCC[C@H]1c2nc(c3ccc(cc3)C(=O)Nc4ccccn4)c5n2ccnc5N"                                                                                                                                              
XQQ SMILES           CACTVS               3.385 "CC=CC(=O)N1CCC[CH]1c2nc(c3ccc(cc3)C(=O)Nc4ccccn4)c5n2ccnc5N"                                                                                                                                                 
XQQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C/C=C/C(=O)N1CCC[C@H]1c2nc(c3n2ccnc3N)c4ccc(cc4)C(=O)Nc5ccccn5"                                                                                                                                              
XQQ SMILES           "OpenEye OEToolkits" 2.0.7 "CC=CC(=O)N1CCCC1c2nc(c3n2ccnc3N)c4ccc(cc4)C(=O)Nc5ccccn5"                                                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XQQ "SYSTEMATIC NAME" ACDLabs              12.01 "4-[(4S)-8-amino-3-{(2S)-1-[(2E)-but-2-enoyl]pyrrolidin-2-yl}imidazo[1,5-a]pyrazin-1-yl]-N-(pyridin-2-yl)benzamide"    
XQQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[8-azanyl-3-[(2~{S})-1-[(~{E})-but-2-enoyl]pyrrolidin-2-yl]imidazo[1,5-a]pyrazin-1-yl]-~{N}-pyridin-2-yl-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XQQ "Create component" 2022-12-05 RCSB 
XQQ "Initial release"  2023-07-05 RCSB 
XQQ "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            XQQ 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C19 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
