data_X3Q
# 
_chem_comp.id                                    X3Q 
_chem_comp.name                                  "(7M)-7-[(4S)-imidazo[1,2-b]pyridazin-3-yl]-1-[(1R)-1-phenylethyl]-3-(piperazin-1-yl)pyrido[3,4-b]pyrazin-2(1H)-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H24 N8 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-10-20 
_chem_comp.pdbx_modified_date                    2024-10-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        452.511 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X3Q 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8UOI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X3Q C15 C1  C 0 1 Y N N N N N -34.143 -20.634 -5.812  -3.826 -3.054 0.503  C15 X3Q 1  
X3Q C12 C2  C 0 1 Y N N N N N -35.527 -24.028 -6.747  -1.004 -0.633 -0.189 C12 X3Q 2  
X3Q C11 C3  C 0 1 Y N N N N N -35.525 -22.712 -6.324  -1.611 -1.818 0.227  C11 X3Q 3  
X3Q C13 C4  C 0 1 Y N N N N N -36.737 -24.730 -6.844  0.376  -0.523 -0.103 C13 X3Q 4  
X3Q C14 C5  C 0 1 Y N N N N N -34.290 -21.927 -6.239  -3.076 -1.954 0.136  C14 X3Q 5  
X3Q C01 C6  C 0 1 N N N N N N -34.720 -27.202 -6.416  1.235  2.816  -1.576 C01 X3Q 6  
X3Q C02 C7  C 0 1 N N R N N N -35.666 -26.902 -7.589  0.266  1.766  -1.028 C02 X3Q 7  
X3Q C04 C8  C 0 1 N N N N N N -38.079 -26.715 -7.254  2.371  0.689  -0.399 C04 X3Q 8  
X3Q C06 C9  C 0 1 N N N N N N -39.302 -25.903 -6.952  3.103  -0.473 0.135  C06 X3Q 9  
X3Q C08 C10 C 0 1 Y N N N N N -37.922 -24.063 -6.532  1.112  -1.615 0.403  C08 X3Q 10 
X3Q C09 C11 C 0 1 Y N N N N N -37.824 -22.728 -6.159  0.423  -2.769 0.799  C09 X3Q 11 
X3Q C17 C12 C 0 1 Y N N N N N -32.167 -21.211 -6.418  -5.213 -1.560 -0.239 C17 X3Q 12 
X3Q C18 C13 C 0 1 Y N N N N N -30.794 -21.363 -6.769  -6.322 -0.801 -0.659 C18 X3Q 13 
X3Q C19 C14 C 0 1 Y N N N N N -30.396 -22.538 -7.295  -6.121 0.457  -1.141 C19 X3Q 14 
X3Q C20 C15 C 0 1 Y N N N N N -31.360 -23.588 -7.487  -4.827 0.984  -1.215 C20 X3Q 15 
X3Q C24 C16 C 0 1 N N N N N N -41.683 -25.770 -6.505  5.249  0.698  -0.309 C24 X3Q 16 
X3Q C25 C17 C 0 1 N N N N N N -42.796 -26.760 -6.121  6.374  0.137  -1.184 C25 X3Q 17 
X3Q C27 C18 C 0 1 N N N N N N -42.060 -28.287 -7.884  6.348  -1.979 0.000  C27 X3Q 18 
X3Q C28 C19 C 0 1 N N N N N N -40.958 -27.271 -8.239  5.221  -1.504 0.925  C28 X3Q 19 
X3Q C29 C20 C 0 1 Y N N N N N -34.989 -26.315 -8.866  -0.560 2.373  0.077  C29 X3Q 20 
X3Q C30 C21 C 0 1 Y N N N N N -35.791 -25.751 -9.879  -1.879 2.715  -0.154 C30 X3Q 21 
X3Q C31 C22 C 0 1 Y N N N N N -35.228 -25.199 -11.031 -2.637 3.272  0.859  C31 X3Q 22 
X3Q C32 C23 C 0 1 Y N N N N N -33.840 -25.209 -11.209 -2.075 3.487  2.104  C32 X3Q 23 
X3Q C33 C24 C 0 1 Y N N N N N -33.045 -25.750 -10.212 -0.756 3.144  2.335  C33 X3Q 24 
X3Q C34 C25 C 0 1 Y N N N N N -33.613 -26.293 -9.055  -0.000 2.582  1.323  C34 X3Q 25 
X3Q N03 N1  N 0 1 N N N N N N -36.857 -26.065 -7.221  1.024  0.628  -0.502 N03 X3Q 26 
X3Q N07 N2  N 0 1 N N N N N N -39.172 -24.664 -6.626  2.454  -1.549 0.504  N07 X3Q 27 
X3Q N10 N3  N 0 1 Y N N N N N -36.682 -22.074 -6.051  -0.886 -2.829 0.705  N10 X3Q 28 
X3Q N16 N4  N 0 1 Y N N N N N -32.831 -20.208 -5.891  -5.104 -2.785 0.262  N16 X3Q 29 
X3Q N21 N5  N 0 1 Y N N N N N -32.619 -23.496 -7.184  -3.794 0.282  -0.830 N21 X3Q 30 
X3Q N22 N6  N 0 1 Y N N N N N -33.012 -22.292 -6.648  -3.960 -1.013 -0.330 N22 X3Q 31 
X3Q N23 N7  N 0 1 N N N N N N -40.523 -26.524 -7.028  4.483  -0.428 0.247  N23 X3Q 32 
X3Q N26 N8  N 0 1 N N N N N N -43.208 -27.610 -7.263  7.163  -0.826 -0.405 N26 X3Q 33 
X3Q O05 O1  O 0 1 N N N N N N -38.140 -27.890 -7.552  2.971  1.690  -0.743 O05 X3Q 34 
X3Q H1  H1  H 0 1 N N N N N N -34.957 -20.020 -5.456  -3.440 -3.976 0.912  H1  X3Q 35 
X3Q H2  H2  H 0 1 N N N N N N -34.598 -24.515 -7.003  -1.598 0.182  -0.576 H2  X3Q 36 
X3Q H3  H3  H 0 1 N N N N N N -35.298 -27.609 -5.573  1.912  2.347  -2.289 H3  X3Q 37 
X3Q H4  H4  H 0 1 N N N N N N -33.965 -27.937 -6.732  0.672  3.605  -2.074 H4  X3Q 38 
X3Q H5  H5  H 0 1 N N N N N N -34.219 -26.274 -6.103  1.810  3.243  -0.755 H5  X3Q 39 
X3Q H6  H6  H 0 1 N N N N N N -36.069 -27.878 -7.898  -0.392 1.425  -1.828 H6  X3Q 40 
X3Q H7  H7  H 0 1 N N N N N N -38.737 -22.193 -5.944  0.971  -3.614 1.188  H7  X3Q 41 
X3Q H8  H8  H 0 1 N N N N N N -30.091 -20.557 -6.617  -7.319 -1.212 -0.599 H8  X3Q 42 
X3Q H9  H9  H 0 1 N N N N N N -29.363 -22.690 -7.570  -6.964 1.049  -1.467 H9  X3Q 43 
X3Q H10 H10 H 0 1 N N N N N N -31.012 -24.518 -7.913  -4.679 1.983  -1.599 H10 X3Q 44 
X3Q H11 H11 H 0 1 N N N N N N -41.379 -25.195 -5.618  5.675  1.287  0.503  H11 X3Q 45 
X3Q H12 H12 H 0 1 N N N N N N -42.054 -25.081 -7.279  4.594  1.327  -0.912 H12 X3Q 46 
X3Q H13 H13 H 0 1 N N N N N N -43.670 -26.192 -5.769  5.944  -0.363 -2.053 H13 X3Q 47 
X3Q H14 H14 H 0 1 N N N N N N -42.430 -27.408 -5.311  7.018  0.952  -1.516 H14 X3Q 48 
X3Q H15 H15 H 0 1 N N N N N N -42.393 -28.795 -8.801  6.973  -2.698 0.529  H15 X3Q 49 
X3Q H16 H16 H 0 1 N N N N N N -41.654 -29.029 -7.181  5.919  -2.450 -0.884 H16 X3Q 50 
X3Q H17 H17 H 0 1 N N N N N N -40.096 -27.807 -8.662  4.547  -2.334 1.136  H17 X3Q 51 
X3Q H18 H18 H 0 1 N N N N N N -41.348 -26.559 -8.982  5.646  -1.127 1.855  H18 X3Q 52 
X3Q H19 H19 H 0 1 N N N N N N -36.865 -25.746 -9.761  -2.318 2.548  -1.127 H19 X3Q 53 
X3Q H20 H20 H 0 1 N N N N N N -35.865 -24.763 -11.786 -3.667 3.540  0.678  H20 X3Q 54 
X3Q H21 H21 H 0 1 N N N N N N -33.397 -24.803 -12.106 -2.667 3.923  2.895  H21 X3Q 55 
X3Q H22 H22 H 0 1 N N N N N N -31.971 -25.753 -10.330 -0.317 3.312  3.307  H22 X3Q 56 
X3Q H23 H23 H 0 1 N N N N N N -32.968 -26.704 -8.292  1.030  2.314  1.504  H23 X3Q 57 
X3Q H24 H24 H 0 1 N N N N N N -43.655 -27.036 -7.949  7.585  -0.382 0.397  H24 X3Q 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X3Q C32 C31 DOUB Y N 1  
X3Q C32 C33 SING Y N 2  
X3Q C31 C30 SING Y N 3  
X3Q C33 C34 DOUB Y N 4  
X3Q C30 C29 DOUB Y N 5  
X3Q C34 C29 SING Y N 6  
X3Q C29 C02 SING N N 7  
X3Q C28 C27 SING N N 8  
X3Q C28 N23 SING N N 9  
X3Q C27 N26 SING N N 10 
X3Q C02 N03 SING N N 11 
X3Q C02 C01 SING N N 12 
X3Q O05 C04 DOUB N N 13 
X3Q C20 C19 SING Y N 14 
X3Q C20 N21 DOUB Y N 15 
X3Q C19 C18 DOUB Y N 16 
X3Q N26 C25 SING N N 17 
X3Q C04 N03 SING N N 18 
X3Q C04 C06 SING N N 19 
X3Q N03 C13 SING N N 20 
X3Q N21 N22 SING Y N 21 
X3Q N23 C06 SING N N 22 
X3Q N23 C24 SING N N 23 
X3Q C06 N07 DOUB N N 24 
X3Q C13 C12 DOUB Y N 25 
X3Q C13 C08 SING Y N 26 
X3Q C18 C17 SING Y N 27 
X3Q C12 C11 SING Y N 28 
X3Q N22 C17 SING Y N 29 
X3Q N22 C14 SING Y N 30 
X3Q N07 C08 SING N N 31 
X3Q C08 C09 DOUB Y N 32 
X3Q C24 C25 SING N N 33 
X3Q C17 N16 DOUB Y N 34 
X3Q C11 C14 SING N N 35 
X3Q C11 N10 DOUB Y N 36 
X3Q C14 C15 DOUB Y N 37 
X3Q C09 N10 SING Y N 38 
X3Q N16 C15 SING Y N 39 
X3Q C15 H1  SING N N 40 
X3Q C12 H2  SING N N 41 
X3Q C01 H3  SING N N 42 
X3Q C01 H4  SING N N 43 
X3Q C01 H5  SING N N 44 
X3Q C02 H6  SING N N 45 
X3Q C09 H7  SING N N 46 
X3Q C18 H8  SING N N 47 
X3Q C19 H9  SING N N 48 
X3Q C20 H10 SING N N 49 
X3Q C24 H11 SING N N 50 
X3Q C24 H12 SING N N 51 
X3Q C25 H13 SING N N 52 
X3Q C25 H14 SING N N 53 
X3Q C27 H15 SING N N 54 
X3Q C27 H16 SING N N 55 
X3Q C28 H17 SING N N 56 
X3Q C28 H18 SING N N 57 
X3Q C30 H19 SING N N 58 
X3Q C31 H20 SING N N 59 
X3Q C32 H21 SING N N 60 
X3Q C33 H22 SING N N 61 
X3Q C34 H23 SING N N 62 
X3Q N26 H24 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X3Q SMILES           ACDLabs              12.01 "CC(c1ccccc1)N1c2cc(ncc2N=C(N2CCNCC2)C1=O)c1cnc2cccnn12"                                                                                                                   
X3Q InChI            InChI                1.06  "InChI=1S/C25H24N8O/c1-17(18-6-3-2-4-7-18)32-21-14-19(22-16-28-23-8-5-9-29-33(22)23)27-15-20(21)30-24(25(32)34)31-12-10-26-11-13-31/h2-9,14-17,26H,10-13H2,1H3/t17-/m1/s1" 
X3Q InChIKey         InChI                1.06  JEICNGBHPARDOJ-QGZVFWFLSA-N                                                                                                                                                
X3Q SMILES_CANONICAL CACTVS               3.385 "C[C@@H](N1C(=O)C(=Nc2cnc(cc12)c3cnc4cccnn34)N5CCNCC5)c6ccccc6"                                                                                                            
X3Q SMILES           CACTVS               3.385 "C[CH](N1C(=O)C(=Nc2cnc(cc12)c3cnc4cccnn34)N5CCNCC5)c6ccccc6"                                                                                                              
X3Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1ccccc1)N2c3cc(ncc3N=C(C2=O)N4CCNCC4)c5cnc6n5nccc6"                                                                                                               
X3Q SMILES           "OpenEye OEToolkits" 2.0.7 "CC(c1ccccc1)N2c3cc(ncc3N=C(C2=O)N4CCNCC4)c5cnc6n5nccc6"                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
X3Q "SYSTEMATIC NAME" ACDLabs              12.01 "(7M)-7-[(4S)-imidazo[1,2-b]pyridazin-3-yl]-1-[(1R)-1-phenylethyl]-3-(piperazin-1-yl)pyrido[3,4-b]pyrazin-2(1H)-one" 
X3Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "7-imidazo[1,2-b]pyridazin-3-yl-1-[(1~{R})-1-phenylethyl]-3-piperazin-1-yl-pyrido[3,4-b]pyrazin-2-one"               
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X3Q "Create component" 2023-10-20 RCSB 
X3Q "Initial release"  2024-10-23 RCSB 
# 
