data_VYQ
# 
_chem_comp.id                                    VYQ 
_chem_comp.name                                  "(2~{S},4~{R})-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-~{N}-[(1~{S})-1-[2-methyl-4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-4-oxidanyl-pyrrolidine-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H37 F N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-04-13 
_chem_comp.pdbx_modified_date                    2023-09-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        544.681 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VYQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8CQK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VYQ C10 C1  C 0 1 Y N N -53.714 -29.785 -39.552 -3.883  0.007  1.154  C10 VYQ 1  
VYQ C13 C2  C 0 1 Y N N -51.737 -27.785 -36.913 -7.518  0.068  0.210  C13 VYQ 2  
VYQ C15 C3  C 0 1 N N N -53.551 -26.537 -35.433 -7.674  0.311  -2.284 C15 VYQ 3  
VYQ C17 C4  C 0 1 Y N N -49.811 -27.657 -35.264 -9.889  0.614  0.588  C17 VYQ 4  
VYQ C20 C5  C 0 1 Y N N -53.915 -27.375 -40.133 -4.249  -1.596 -0.594 C20 VYQ 5  
VYQ C21 C6  C 0 1 N N N -54.429 -26.225 -41.023 -3.710  -2.645 -1.532 C21 VYQ 6  
VYQ C24 C7  C 0 1 N N N -53.824 -31.019 -46.197 3.182   0.139  0.133  C24 VYQ 7  
VYQ C26 C8  C 0 1 N N N -53.168 -29.600 -48.195 4.554   -0.602 -1.795 C26 VYQ 8  
VYQ C28 C9  C 0 1 N N N -52.205 -28.887 -47.213 3.420   -0.121 -2.703 C28 VYQ 9  
VYQ C02 C10 C 0 1 N N R -50.787 -32.348 -44.267 1.457   3.296  -0.608 C02 VYQ 10 
VYQ C03 C11 C 0 1 N N N -51.573 -31.758 -43.142 0.256   2.452  -0.106 C03 VYQ 11 
VYQ C04 C12 C 0 1 N N S -52.916 -31.470 -43.748 0.938   1.200  0.486  C04 VYQ 12 
VYQ C05 C13 C 0 1 N N N -53.458 -30.159 -43.199 0.121   -0.026 0.169  C05 VYQ 13 
VYQ C07 C14 C 0 1 N N S -55.087 -28.966 -41.650 -1.936  -1.324 0.320  C07 VYQ 14 
VYQ C08 C15 C 0 1 N N N -56.508 -29.238 -41.176 -1.695  -2.388 1.393  C08 VYQ 15 
VYQ C09 C16 C 0 1 Y N N -54.224 -28.635 -40.430 -3.398  -0.961 0.293  C09 VYQ 16 
VYQ C11 C17 C 0 1 Y N N -52.966 -29.520 -38.491 -5.221  0.345  1.133  C11 VYQ 17 
VYQ C12 C18 C 0 1 Y N N -52.612 -28.067 -38.144 -6.083  -0.289 0.237  C12 VYQ 18 
VYQ C14 C19 C 0 1 Y N N -52.150 -27.109 -35.700 -8.251  0.337  -0.892 C14 VYQ 19 
VYQ C19 C20 C 0 1 Y N N -53.044 -27.070 -38.905 -5.586  -1.260 -0.632 C19 VYQ 20 
VYQ C25 C21 C 0 1 N N S -53.503 -31.020 -47.696 4.549   0.210  -0.499 C25 VYQ 21 
VYQ C27 C22 C 0 1 N N N -54.479 -28.780 -48.316 4.354   -2.083 -1.470 C27 VYQ 22 
VYQ C29 C23 C 0 1 N N N -52.496 -29.701 -49.587 5.894   -0.412 -2.510 C29 VYQ 23 
VYQ C31 C24 C 0 1 N N N -54.726 -32.877 -48.898 6.831   0.049  0.340  C31 VYQ 24 
VYQ C32 C25 C 0 1 N N N -55.990 -33.350 -49.654 7.854   -0.516 1.291  C32 VYQ 25 
VYQ C34 C26 C 0 1 N N N -55.745 -34.227 -50.887 9.047   -1.258 0.686  C34 VYQ 26 
VYQ C35 C27 C 0 1 N N N -56.286 -34.854 -49.595 9.241   0.129  1.303  C35 VYQ 27 
VYQ C38 C28 C 0 1 N N N -51.365 -31.808 -45.569 2.429   2.194  -1.098 C38 VYQ 28 
VYQ F33 F1  F 0 1 N N N -57.083 -32.534 -49.727 7.350   -0.987 2.509  F33 VYQ 29 
VYQ N06 N1  N 0 1 N N N -54.552 -30.197 -42.205 -1.142  -0.132 0.628  N06 VYQ 30 
VYQ N16 N2  N 0 1 Y N N -50.961 -27.041 -34.714 -9.510  0.623  -0.647 N16 VYQ 31 
VYQ N23 N3  N 0 1 N N N -52.772 -31.404 -45.227 2.266   1.091  -0.135 N23 VYQ 32 
VYQ N30 N4  N 0 1 N N N -54.667 -31.492 -48.407 5.543   -0.339 0.426  N30 VYQ 33 
VYQ O01 O1  O 0 1 N N N -50.972 -33.746 -44.256 2.035   4.050  0.460  O01 VYQ 34 
VYQ O22 O2  O 0 1 N N N -53.012 -29.124 -43.557 0.600   -0.918 -0.499 O22 VYQ 35 
VYQ O36 O3  O 0 1 N N N -53.819 -33.616 -48.710 7.166   0.854  -0.503 O36 VYQ 36 
VYQ O37 O4  O 0 1 N N N -54.904 -30.724 -45.812 2.907   -0.774 0.882  O37 VYQ 37 
VYQ S18 S1  S 0 1 Y N N -50.180 -28.222 -36.776 -8.579  0.211  1.610  S18 VYQ 38 
VYQ H1  H1  H 0 1 N N N -53.964 -30.807 -39.798 -3.215  0.496  1.847  H1  VYQ 39 
VYQ H2  H2  H 0 1 N N N -53.575 -26.074 -34.435 -7.841  -0.670 -2.729 H2  VYQ 40 
VYQ H3  H3  H 0 1 N N N -53.789 -25.779 -36.194 -8.160  1.073  -2.893 H3  VYQ 41 
VYQ H4  H4  H 0 1 N N N -54.293 -27.348 -35.478 -6.603  0.511  -2.237 H4  VYQ 42 
VYQ H5  H5  H 0 1 N N N -48.851 -27.744 -34.777 -10.892 0.830  0.926  H5  VYQ 43 
VYQ H6  H6  H 0 1 N N N -55.404 -25.879 -40.649 -3.378  -2.171 -2.455 H6  VYQ 44 
VYQ H7  H7  H 0 1 N N N -53.710 -25.393 -40.998 -2.869  -3.155 -1.063 H7  VYQ 45 
VYQ H8  H8  H 0 1 N N N -54.539 -26.583 -42.057 -4.494  -3.368 -1.757 H8  VYQ 46 
VYQ H9  H9  H 0 1 N N N -52.679 -28.813 -46.223 3.600   0.914  -2.992 H9  VYQ 47 
VYQ H10 H10 H 0 1 N N N -51.272 -29.464 -47.131 3.379   -0.746 -3.595 H10 VYQ 48 
VYQ H11 H11 H 0 1 N N N -51.980 -27.878 -47.588 2.473   -0.190 -2.168 H11 VYQ 49 
VYQ H12 H12 H 0 1 N N N -49.725 -32.075 -44.182 1.160   3.950  -1.428 H12 VYQ 50 
VYQ H13 H13 H 0 1 N N N -51.664 -32.474 -42.312 -0.299  2.989  0.663  H13 VYQ 51 
VYQ H14 H14 H 0 1 N N N -51.102 -30.833 -42.779 -0.398  2.182  -0.935 H14 VYQ 52 
VYQ H15 H15 H 0 1 N N N -53.612 -32.281 -43.486 1.039   1.309  1.566  H15 VYQ 53 
VYQ H16 H16 H 0 1 N N N -55.066 -28.142 -42.379 -1.640  -1.716 -0.653 H16 VYQ 54 
VYQ H17 H17 H 0 1 N N N -56.936 -28.318 -40.751 -1.990  -1.997 2.366  H17 VYQ 55 
VYQ H18 H18 H 0 1 N N N -57.122 -29.568 -42.027 -2.285  -3.276 1.164  H18 VYQ 56 
VYQ H19 H19 H 0 1 N N N -56.494 -30.025 -40.408 -0.637  -2.651 1.413  H19 VYQ 57 
VYQ H20 H20 H 0 1 N N N -52.605 -30.327 -37.870 -5.599  1.097  1.809  H20 VYQ 58 
VYQ H21 H21 H 0 1 N N N -52.785 -26.050 -38.663 -6.250  -1.756 -1.325 H21 VYQ 59 
VYQ H22 H22 H 0 1 N N N -52.643 -31.680 -47.883 4.793   1.249  -0.720 H22 VYQ 60 
VYQ H23 H23 H 0 1 N N N -54.959 -28.707 -47.329 3.400   -2.218 -0.961 H23 VYQ 61 
VYQ H24 H24 H 0 1 N N N -54.247 -27.771 -48.687 4.358   -2.662 -2.394 H24 VYQ 62 
VYQ H25 H25 H 0 1 N N N -55.161 -29.281 -49.019 5.162   -2.425 -0.824 H25 VYQ 63 
VYQ H26 H26 H 0 1 N N N -51.566 -30.282 -49.504 6.702   -0.755 -1.863 H26 VYQ 64 
VYQ H27 H27 H 0 1 N N N -53.180 -30.201 -50.289 5.898   -0.991 -3.434 H27 VYQ 65 
VYQ H28 H28 H 0 1 N N N -52.266 -28.691 -49.957 6.036   0.643  -2.741 H28 VYQ 66 
VYQ H29 H29 H 0 1 N N N -56.397 -34.132 -51.768 9.441   -2.112 1.236  H29 VYQ 67 
VYQ H30 H30 H 0 1 N N N -54.717 -34.442 -51.214 9.093   -1.336 -0.400 H30 VYQ 68 
VYQ H31 H31 H 0 1 N N N -57.326 -35.209 -49.549 9.413   0.963  0.622  H31 VYQ 69 
VYQ H32 H32 H 0 1 N N N -55.646 -35.518 -48.995 9.761   0.187  2.258  H32 VYQ 70 
VYQ H33 H33 H 0 1 N N N -51.364 -32.587 -46.346 2.156   1.867  -2.101 H33 VYQ 71 
VYQ H34 H34 H 0 1 N N N -50.787 -30.940 -45.919 3.456   2.561  -1.085 H34 VYQ 72 
VYQ H35 H35 H 0 1 N N N -54.926 -31.077 -41.913 -1.525  0.581  1.163  H35 VYQ 73 
VYQ H36 H36 H 0 1 N N N -55.437 -30.874 -48.567 5.275   -0.983 1.100  H36 VYQ 74 
VYQ H37 H37 H 0 1 N N N -50.618 -34.106 -43.451 2.789   4.594  0.195  H37 VYQ 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VYQ C34 C32 SING N N 1  
VYQ C34 C35 SING N N 2  
VYQ F33 C32 SING N N 3  
VYQ C32 C35 SING N N 4  
VYQ C32 C31 SING N N 5  
VYQ C29 C26 SING N N 6  
VYQ C31 O36 DOUB N N 7  
VYQ C31 N30 SING N N 8  
VYQ N30 C25 SING N N 9  
VYQ C27 C26 SING N N 10 
VYQ C26 C25 SING N N 11 
VYQ C26 C28 SING N N 12 
VYQ C25 C24 SING N N 13 
VYQ C24 O37 DOUB N N 14 
VYQ C24 N23 SING N N 15 
VYQ C38 N23 SING N N 16 
VYQ C38 C02 SING N N 17 
VYQ N23 C04 SING N N 18 
VYQ C02 O01 SING N N 19 
VYQ C02 C03 SING N N 20 
VYQ C04 C05 SING N N 21 
VYQ C04 C03 SING N N 22 
VYQ O22 C05 DOUB N N 23 
VYQ C05 N06 SING N N 24 
VYQ N06 C07 SING N N 25 
VYQ C07 C08 SING N N 26 
VYQ C07 C09 SING N N 27 
VYQ C21 C20 SING N N 28 
VYQ C09 C20 DOUB Y N 29 
VYQ C09 C10 SING Y N 30 
VYQ C20 C19 SING Y N 31 
VYQ C10 C11 DOUB Y N 32 
VYQ C19 C12 DOUB Y N 33 
VYQ C11 C12 SING Y N 34 
VYQ C12 C13 SING N N 35 
VYQ C13 S18 SING Y N 36 
VYQ C13 C14 DOUB Y N 37 
VYQ S18 C17 SING Y N 38 
VYQ C14 C15 SING N N 39 
VYQ C14 N16 SING Y N 40 
VYQ C17 N16 DOUB Y N 41 
VYQ C10 H1  SING N N 42 
VYQ C15 H2  SING N N 43 
VYQ C15 H3  SING N N 44 
VYQ C15 H4  SING N N 45 
VYQ C17 H5  SING N N 46 
VYQ C21 H6  SING N N 47 
VYQ C21 H7  SING N N 48 
VYQ C21 H8  SING N N 49 
VYQ C28 H9  SING N N 50 
VYQ C28 H10 SING N N 51 
VYQ C28 H11 SING N N 52 
VYQ C02 H12 SING N N 53 
VYQ C03 H13 SING N N 54 
VYQ C03 H14 SING N N 55 
VYQ C04 H15 SING N N 56 
VYQ C07 H16 SING N N 57 
VYQ C08 H17 SING N N 58 
VYQ C08 H18 SING N N 59 
VYQ C08 H19 SING N N 60 
VYQ C11 H20 SING N N 61 
VYQ C19 H21 SING N N 62 
VYQ C25 H22 SING N N 63 
VYQ C27 H23 SING N N 64 
VYQ C27 H24 SING N N 65 
VYQ C27 H25 SING N N 66 
VYQ C29 H26 SING N N 67 
VYQ C29 H27 SING N N 68 
VYQ C29 H28 SING N N 69 
VYQ C34 H29 SING N N 70 
VYQ C34 H30 SING N N 71 
VYQ C35 H31 SING N N 72 
VYQ C35 H32 SING N N 73 
VYQ C38 H33 SING N N 74 
VYQ C38 H34 SING N N 75 
VYQ N06 H35 SING N N 76 
VYQ N30 H36 SING N N 77 
VYQ O01 H37 SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VYQ InChI            InChI                1.06  "InChI=1S/C28H37FN4O4S/c1-15-11-18(22-17(3)30-14-38-22)7-8-20(15)16(2)31-24(35)21-12-19(34)13-33(21)25(36)23(27(4,5)6)32-26(37)28(29)9-10-28/h7-8,11,14,16,19,21,23,34H,9-10,12-13H2,1-6H3,(H,31,35)(H,32,37)/t16-,19+,21-,23+/m0/s1" 
VYQ InChIKey         InChI                1.06  NBHYPBDUODSQHJ-DTPUHQDNSA-N                                                                                                                                                                                                           
VYQ SMILES_CANONICAL CACTVS               3.385 "C[C@H](NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](NC(=O)C2(F)CC2)C(C)(C)C)c3ccc(cc3C)c4scnc4C"                                                                                                                                            
VYQ SMILES           CACTVS               3.385 "C[CH](NC(=O)[CH]1C[CH](O)CN1C(=O)[CH](NC(=O)C2(F)CC2)C(C)(C)C)c3ccc(cc3C)c4scnc4C"                                                                                                                                                   
VYQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1[C@H](C)NC(=O)[C@@H]2C[C@H](CN2C(=O)[C@H](C(C)(C)C)NC(=O)C3(CC3)F)O)c4c(ncs4)C"                                                                                                                                            
VYQ SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1C(C)NC(=O)C2CC(CN2C(=O)C(C(C)(C)C)NC(=O)C3(CC3)F)O)c4c(ncs4)C"                                                                                                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           VYQ 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S},4~{R})-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-~{N}-[(1~{S})-1-[2-methyl-4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-4-oxidanyl-pyrrolidine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VYQ "Create component" 2023-04-13 PDBE 
VYQ "Initial release"  2023-09-27 RCSB 
# 
