data_H6Q
#

_chem_comp.id                                   H6Q
_chem_comp.name                                 "2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-beta-D-glucopyranose"
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C9 H19 O11 P"
_chem_comp.mon_nstd_parent_comp_id              BGC
_chem_comp.pdbx_synonyms                        
;[(2~{S})-1,1-bis(oxidanyl)propan-2-yl]
[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen phosphate;
2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-beta-D-glucose;
2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-D-glucose;
2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-glucose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-11-19
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       334.214
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    H6Q
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6I7W
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  H6Q  
;[(2~{S})-1,1-bis(oxidanyl)propan-2-yl]
[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen phosphate
;
  PDB  ?  
2  H6Q  "2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-beta-D-glucose"  PDB  ?  
3  H6Q  "2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-D-glucose"  PDB  ?  
4  H6Q  "2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-glucose"  PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H6Q  C6   C8   C  0  1  N  N  N  -24.291  -12.881  -28.727   5.437  -0.376   0.258  C6   H6Q   1  
H6Q  C3   C5   C  0  1  N  N  S  -24.446   -9.407  -26.876   2.002   1.243  -0.374  C3   H6Q   2  
H6Q  C4   C6   C  0  1  N  N  S  -24.781  -10.449  -27.976   3.427   1.107   0.172  C4   H6Q   3  
H6Q  O2   O6   O  0  1  N  N  N  -22.717   -8.580  -25.414  -0.126   0.101  -0.510  O2   H6Q   4  
H6Q  C2A  C2   C  0  1  N  N  S  -23.665   -5.185  -24.907  -4.066   0.553  -0.070  C2A  H6Q   5  
H6Q  C2   C4   C  0  1  N  N  R  -22.933   -9.357  -26.587   1.184   0.020   0.054  C2   H6Q   6  
H6Q  O1A  O1   O  0  1  N  N  N  -25.484   -5.206  -23.288  -4.476  -1.827  -0.171  O1A  H6Q   7  
H6Q  C1A  C1   C  0  1  N  N  N  -25.157   -5.449  -24.659  -4.974  -0.558  -0.601  C1A  H6Q   8  
H6Q  O2A  O2   O  0  1  N  N  N  -25.504   -6.794  -24.990  -6.299  -0.371  -0.099  O2A  H6Q   9  
H6Q  C3A  C3   C  0  1  N  N  N  -23.471   -3.773  -25.468  -4.599   1.911  -0.530  C3A  H6Q  10  
H6Q  O3A  O3   O  0  1  N  N  N  -21.498   -6.953  -24.062  -1.624  -1.246   1.179  O3A  H6Q  11  
H6Q  P1   P1   P  0  1  N  N  N  -21.958   -7.167  -25.450  -1.464   0.145   0.384  P1   H6Q  12  
H6Q  O4A  O4   O  0  1  N  N  N  -20.974   -7.125  -26.541  -1.374   1.260   1.353  O4A  H6Q  13  
H6Q  O5A  O5   O  0  1  N  N  N  -23.131   -6.131  -25.852  -2.741   0.366  -0.572  O5A  H6Q  14  
H6Q  O3   O7   O  0  1  N  N  N  -24.897   -8.092  -27.286   1.399   2.428   0.149  O3   H6Q  15  
H6Q  O4   O8   O  0  1  N  N  N  -26.191  -10.618  -28.045   4.219   2.207  -0.282  O4   H6Q  16  
H6Q  C5   C7   C  0  1  N  N  R  -24.113  -11.822  -27.622   4.035  -0.204  -0.332  C5   H6Q  17  
H6Q  O6   O9   O  0  1  N  N  N  -23.853  -12.358  -29.985   6.049  -1.539  -0.303  O6   H6Q  18  
H6Q  O5   OX1  O  0  1  N  N  N  -22.701  -11.645  -27.414   3.210  -1.298   0.075  O5   H6Q  19  
H6Q  C1   C9   C  0  1  N  N  R  -22.375  -10.773  -26.321   1.879  -1.249  -0.445  C1   H6Q  20  
H6Q  O1   OX2  O  0  1  N  Y  N  -20.946  -10.730  -26.215   1.152  -2.396  -0.001  O1   H6Q  21  
H6Q  H61  H1   H  0  1  N  N  N  -25.353  -13.158  -28.798   6.040   0.501   0.023  H61  H6Q  22  
H6Q  H62  H2   H  0  1  N  N  N  -23.696  -13.772  -28.476   5.364  -0.489   1.339  H62  H6Q  23  
H6Q  H3   H3   H  0  1  N  N  N  -24.965   -9.703  -25.953   2.032   1.298  -1.462  H3   H6Q  24  
H6Q  H4   H4   H  0  1  N  N  N  -24.381  -10.097  -28.938   3.400   1.102   1.262  H4   H6Q  25  
H6Q  H5A  H5   H  0  1  N  N  N  -23.128   -5.263  -23.950  -4.050   0.519   1.020  H5A  H6Q  26  
H6Q  H2   H6   H  0  1  N  N  N  -22.412   -8.918  -27.451   1.113  -0.007   1.142  H2   H6Q  27  
H6Q  H7   H7   H  0  1  N  N  N  -25.255   -4.312  -23.061  -4.434  -1.928   0.790  H7   H6Q  28  
H6Q  H8   H8   H  0  1  N  N  N  -26.430   -6.932  -24.828  -6.930  -1.041  -0.396  H8   H6Q  29  
H6Q  H9   H9   H  0  1  N  N  N  -23.874   -3.037  -24.757  -5.609   2.054  -0.147  H9   H6Q  30  
H6Q  H10  H10  H  0  1  N  N  N  -22.398   -3.584  -25.622  -3.952   2.703  -0.152  H10  H6Q  31  
H6Q  H11  H11  H  0  1  N  N  N  -24.001   -3.684  -26.428  -4.615   1.945  -1.619  H11  H6Q  32  
H6Q  H12  H12  H  0  1  N  N  N  -20.559   -6.806  -24.058  -1.689  -2.022   0.606  H12  H6Q  33  
H6Q  HO3  H13  H  0  1  N  Y  N  -24.689   -7.460  -26.608   1.866   3.243  -0.084  HO3  H6Q  34  
H6Q  HO4  H14  H  0  1  N  Y  N  -26.600   -9.788  -28.259   5.136   2.183   0.023  HO4  H6Q  35  
H6Q  H5   H15  H  0  1  N  N  N  -24.580  -12.201  -26.701   4.099  -0.181  -1.420  H5   H6Q  36  
H6Q  HO6  H16  H  0  1  N  Y  N  -23.966  -13.017  -30.659   6.942  -1.710   0.027  HO6  H6Q  37  
H6Q  H1   H17  H  0  1  N  N  N  -22.814  -11.155  -25.387   1.914  -1.240  -1.534  H1   H6Q  38  
H6Q  HO1  H18  H  0  1  N  Y  N  -20.698  -10.159  -25.498   1.536  -3.238  -0.282  HO1  H6Q  39  
H6Q  H19  H19  H  0  1  N  N  N  -25.731   -4.760  -25.295  -4.990  -0.524  -1.690  H19  H6Q  40  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H6Q  O6   C6   SING  N  N   1  
H6Q  C6   C5   SING  N  N   2  
H6Q  O4   C4   SING  N  N   3  
H6Q  C4   C5   SING  N  N   4  
H6Q  C4   C3   SING  N  N   5  
H6Q  C5   O5   SING  N  N   6  
H6Q  O5   C1   SING  N  N   7  
H6Q  O3   C3   SING  N  N   8  
H6Q  C3   C2   SING  N  N   9  
H6Q  C2   C1   SING  N  N  10  
H6Q  C2   O2   SING  N  N  11  
H6Q  O4A  P1   DOUB  N  N  12  
H6Q  C1   O1   SING  N  N  13  
H6Q  O5A  P1   SING  N  N  14  
H6Q  O5A  C2A  SING  N  N  15  
H6Q  C3A  C2A  SING  N  N  16  
H6Q  P1   O2   SING  N  N  17  
H6Q  P1   O3A  SING  N  N  18  
H6Q  O2A  C1A  SING  N  N  19  
H6Q  C2A  C1A  SING  N  N  20  
H6Q  C1A  O1A  SING  N  N  21  
H6Q  C6   H61  SING  N  N  22  
H6Q  C6   H62  SING  N  N  23  
H6Q  C3   H3   SING  N  N  24  
H6Q  C4   H4   SING  N  N  25  
H6Q  C2A  H5A  SING  N  N  26  
H6Q  C2   H2   SING  N  N  27  
H6Q  O1A  H7   SING  N  N  28  
H6Q  O2A  H8   SING  N  N  29  
H6Q  C3A  H9   SING  N  N  30  
H6Q  C3A  H10  SING  N  N  31  
H6Q  C3A  H11  SING  N  N  32  
H6Q  O3A  H12  SING  N  N  33  
H6Q  O3   HO3  SING  N  N  34  
H6Q  O4   HO4  SING  N  N  35  
H6Q  C5   H5   SING  N  N  36  
H6Q  O6   HO6  SING  N  N  37  
H6Q  C1   H1   SING  N  N  38  
H6Q  O1   HO1  SING  N  N  39  
H6Q  C1A  H19  SING  N  N  40  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H6Q  InChI             InChI                 1.03   "InChI=1S/C9H19O11P/c1-3(8(13)14)19-21(16,17)20-7-6(12)5(11)4(2-10)18-9(7)15/h3-15H,2H2,1H3,(H,16,17)/t3-,4+,5+,6-,7+,9+/m0/s1"  
H6Q  InChIKey          InChI                 1.03   SILWFZFNYLTARD-AVLLYLPDSA-N  
H6Q  SMILES_CANONICAL  CACTVS                3.385  "C[C@H](O[P](O)(=O)O[C@H]1[C@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O)C(O)O"  
H6Q  SMILES            CACTVS                3.385  "C[CH](O[P](O)(=O)O[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O)C(O)O"  
H6Q  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C[C@@H](C(O)O)OP(=O)(O)O[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O"  
H6Q  SMILES            "OpenEye OEToolkits"  2.0.6  "CC(C(O)O)OP(=O)(O)OC1C(C(C(OC1O)CO)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          H6Q
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       
;[(2~{S})-1,1-bis(oxidanyl)propan-2-yl]
[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen phosphate
;

#
_pdbx_chem_comp_related.comp_id            H6Q
_pdbx_chem_comp_related.related_comp_id    BGC
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  H6Q  C2   BGC  C2   "Carbohydrate core"  
 2  H6Q  C3   BGC  C3   "Carbohydrate core"  
 3  H6Q  C4   BGC  C4   "Carbohydrate core"  
 4  H6Q  C5   BGC  C5   "Carbohydrate core"  
 5  H6Q  C6   BGC  C6   "Carbohydrate core"  
 6  H6Q  C1   BGC  C1   "Carbohydrate core"  
 7  H6Q  O2   BGC  O2   "Carbohydrate core"  
 8  H6Q  O3   BGC  O3   "Carbohydrate core"  
 9  H6Q  O4   BGC  O4   "Carbohydrate core"  
10  H6Q  O6   BGC  O6   "Carbohydrate core"  
11  H6Q  O5   BGC  O5   "Carbohydrate core"  
12  H6Q  O1   BGC  O1   "Carbohydrate core"  
13  H6Q  H61  BGC  H61  "Carbohydrate core"  
14  H6Q  HO3  BGC  HO3  "Carbohydrate core"  
15  H6Q  HO4  BGC  HO4  "Carbohydrate core"  
16  H6Q  H5   BGC  H5   "Carbohydrate core"  
17  H6Q  HO6  BGC  HO6  "Carbohydrate core"  
18  H6Q  H1   BGC  H1   "Carbohydrate core"  
19  H6Q  HO1  BGC  HO1  "Carbohydrate core"  
20  H6Q  H62  BGC  H62  "Carbohydrate core"  
21  H6Q  H3   BGC  H3   "Carbohydrate core"  
22  H6Q  H4   BGC  H4   "Carbohydrate core"  
23  H6Q  H2   BGC  H2   "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
H6Q  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
H6Q  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
H6Q  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
H6Q  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H6Q  "Create component"          2018-11-19  EBI   
H6Q  "Initial release"           2019-01-23  RCSB  
H6Q  "Other modification"        2020-07-03  RCSB  
H6Q  "Modify parent residue"     2020-07-17  RCSB  
H6Q  "Modify name"               2020-07-17  RCSB  
H6Q  "Modify synonyms"           2020-07-17  RCSB  
H6Q  "Modify internal type"      2020-07-17  RCSB  
H6Q  "Modify linking type"       2020-07-17  RCSB  
H6Q  "Modify atom id"            2020-07-17  RCSB  
H6Q  "Modify component atom id"  2020-07-17  RCSB  
H6Q  "Modify leaving atom flag"  2020-07-17  RCSB  
##
