data_AJQ
# 
_chem_comp.id                                    AJQ 
_chem_comp.name                                  
;[(2~{S},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl-[[[(2~{S},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl-oxidanyl-phosphoryl]oxy-sulfanyl-phosphoryl]oxy-phosphinic acid
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H30 N10 O15 P3 S3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2017-08-21 
_chem_comp.pdbx_modified_date                    2018-04-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        851.637 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     AJQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5OSY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
AJQ C1  C4  C 0 1 Y N N -25.900 5.626  -0.528 9.460   1.134  -0.655 C1  AJQ 1  
AJQ C2  C5  C 0 1 Y N N -27.078 5.040  -0.118 9.789   2.471  -0.906 C2  AJQ 2  
AJQ C3  C6  C 0 1 N N N -27.979 5.731  0.687  10.933  2.751  -1.690 C3  AJQ 3  
AJQ C4  C8  C 0 1 Y N N -26.013 3.615  -1.325 7.999   2.469  0.315  C4  AJQ 4  
AJQ C5  C2  C 0 1 N N N -26.499 7.566  0.639  11.286  0.431  -1.883 C5  AJQ 5  
AJQ O1  O6G O 0 1 N N N -15.283 -4.996 -1.199 -11.729 4.373  1.323  O1  AJQ 6  
AJQ C6  C6G C 0 1 N N N -15.519 -3.934 -0.583 -11.282 3.238  1.362  C6  AJQ 7  
AJQ N1  N1G N 0 1 N N N -14.583 -3.390 0.202  -11.792 2.329  2.207  N1  AJQ 8  
AJQ C7  C2G C 0 1 N N N -14.818 -2.253 0.870  -11.320 1.102  2.260  C7  AJQ 9  
AJQ N2  N2G N 0 1 N N N -13.849 -1.727 1.657  -11.882 0.218  3.142  N2  AJQ 10 
AJQ N3  N3G N 0 1 N N N -16.010 -1.621 0.770  -10.297 0.678  1.472  N3  AJQ 11 
AJQ C8  C4G C 0 1 Y N N -16.986 -2.136 -0.014 -9.708  1.533  0.576  C8  AJQ 12 
AJQ C9  C5G C 0 1 Y N N -16.753 -3.310 -0.708 -10.179 2.837  0.483  C9  AJQ 13 
AJQ N4  N7G N 0 1 Y N N -17.872 -3.600 -1.401 -9.446  3.465  -0.466 N4  AJQ 14 
AJQ C10 C8G C 0 1 Y N N -18.775 -2.626 -1.141 -8.572  2.631  -0.952 C10 AJQ 15 
AJQ N5  N9G N 0 1 Y N N -18.230 -1.739 -0.296 -8.697  1.424  -0.328 N5  AJQ 16 
AJQ C11 C1P C 0 1 N N R -18.888 -0.520 0.236  -7.896  0.226  -0.592 C11 AJQ 17 
AJQ O2  O4P O 0 1 N N N -19.955 -0.852 1.129  -6.627  0.588  -1.177 O2  AJQ 18 
AJQ C12 C2P C 0 1 N N R -19.506 0.274  -0.900 -8.584  -0.656 -1.658 C12 AJQ 19 
AJQ O3  O2P O 0 1 N N N -18.612 1.307  -1.325 -9.309  -1.719 -1.036 O3  AJQ 20 
AJQ C13 C3P C 0 1 N N S -20.766 0.862  -0.302 -7.412  -1.218 -2.494 C13 AJQ 21 
AJQ O4  O3P O 0 1 N N N -20.512 2.200  0.136  -7.378  -2.644 -2.414 O4  AJQ 22 
AJQ C14 C4P C 0 1 N N S -21.096 -0.022 0.892  -6.155  -0.608 -1.835 C14 AJQ 23 
AJQ C15 C5P C 0 1 N N N -22.305 -0.917 0.637  -5.114  -0.256 -2.899 C15 AJQ 24 
AJQ S1  S5P S 0 1 N N N -23.760 0.040  0.361  -3.594  0.318  -2.091 S1  AJQ 25 
AJQ P1  PA  P 0 1 N N N -24.428 -0.260 -1.554 -2.740  -1.476 -1.352 P1  AJQ 26 
AJQ O5  OA1 O 0 1 N N N -25.672 0.556  -1.812 -2.471  -2.395 -2.480 O5  AJQ 27 
AJQ O6  OA2 O 0 1 N N N -24.719 -1.722 -1.790 -3.763  -2.173 -0.322 O6  AJQ 28 
AJQ O7  OAB O 0 1 N N N -23.289 0.216  -2.583 -1.360  -1.140 -0.593 O7  AJQ 29 
AJQ P2  PB  P 0 1 N N R -22.301 -0.833 -3.295 -0.257  -2.032 0.169  P2  AJQ 30 
AJQ S2  SB  S 0 1 N N N -23.301 -1.874 -4.778 0.563   -3.447 -1.180 S2  AJQ 31 
AJQ O8  OB  O 0 1 N N N -21.832 -1.833 -2.310 -0.893  -2.740 1.302  O8  AJQ 32 
AJQ O9  OBC O 0 1 N N N -21.029 -0.016 -3.859 0.915   -1.077 0.724  O9  AJQ 33 
AJQ P3  PC  P 0 1 N N N -20.999 1.045  -5.079 2.272   -1.337 1.549  P3  AJQ 34 
AJQ O10 OC1 O 0 1 N N N -20.447 0.299  -6.268 3.154   -2.240 0.777  O10 AJQ 35 
AJQ O11 OC2 O 0 1 N N N -20.024 2.137  -4.709 1.917   -2.016 2.966  O11 AJQ 36 
AJQ S3  S5* S 0 1 N N N -22.815 1.910  -5.635 3.263   0.508  1.879  S3  AJQ 37 
AJQ C16 C5* C 0 1 N N N -23.711 2.703  -4.338 4.742   0.017  2.807  C16 AJQ 38 
AJQ C17 C4* C 0 1 N N S -23.065 4.012  -3.910 5.746   -0.639 1.856  C17 AJQ 39 
AJQ O12 O4* O 0 1 N N N -24.072 4.866  -3.354 6.234   0.332  0.915  O12 AJQ 40 
AJQ C18 C3* C 0 1 N N S -22.085 3.754  -2.786 6.960   -1.157 2.652  C18 AJQ 41 
AJQ O13 O3* O 0 1 N N N -21.116 4.803  -2.765 7.099   -2.570 2.490  O13 AJQ 42 
AJQ C19 C2* C 0 1 N N R -22.960 3.832  -1.557 8.168   -0.419 2.024  C19 AJQ 43 
AJQ O14 O2* O 0 1 N N N -22.191 4.186  -0.405 9.285   -1.298 1.883  O14 AJQ 44 
AJQ C20 C1* C 0 1 N N R -23.942 4.931  -1.928 7.611   -0.005 0.638  C20 AJQ 45 
AJQ N6  N9  N 0 1 Y N N -25.258 4.724  -1.272 8.332   1.160  0.119  N6  AJQ 46 
AJQ N7  N7  N 1 1 Y N N -27.138 3.797  -0.615 8.858   3.238  -0.288 N7  AJQ 47 
AJQ C21 CM7 C 0 1 N N N -28.210 2.781  -0.448 8.823   4.702  -0.298 C21 AJQ 48 
AJQ N8  N3  N 0 1 N N N -25.623 6.893  -0.141 10.226  0.158  -1.156 N8  AJQ 49 
AJQ N9  N2  N 0 1 N N N -26.211 8.834  1.021  12.041  -0.603 -2.376 N9  AJQ 50 
AJQ N10 N1  N 0 1 N N N -27.658 6.993  1.046  11.658  1.713  -2.162 N10 AJQ 51 
AJQ O15 O6  O 0 1 N N N -29.155 5.194  1.117  11.256  3.901  -1.935 O15 AJQ 52 
AJQ H1  H1  H 0 1 N N N -25.754 2.712  -1.858 7.149   2.815  0.885  H1  AJQ 53 
AJQ H2  H2  H 0 1 N N N -12.965 -2.187 1.737  -12.613 0.501  3.713  H2  AJQ 54 
AJQ H3  H3  H 0 1 N N N -14.018 -0.878 2.158  -11.548 -0.691 3.196  H3  AJQ 55 
AJQ H4  H4  H 0 1 N N N -16.170 -0.773 1.275  -9.981  -0.236 1.544  H4  AJQ 56 
AJQ H5  H5  H 0 1 N N N -19.774 -2.572 -1.549 -7.854  2.861  -1.725 H5  AJQ 57 
AJQ H6  H6  H 0 1 N N N -18.143 0.106  0.748  -7.743  -0.338 0.328  H6  AJQ 58 
AJQ H7  H7  H 0 1 N N N -19.762 -0.398 -1.732 -9.245  -0.056 -2.282 H7  AJQ 59 
AJQ H8  H8  H 0 1 N N N -17.830 0.916  -1.696 -9.712  -2.339 -1.660 H8  AJQ 60 
AJQ H9  H9  H 0 1 N N N -21.586 0.828  -1.035 -7.496  -0.896 -3.532 H9  AJQ 61 
AJQ H10 H10 H 0 1 N N N -21.304 2.567  0.511  -8.171  -3.076 -2.759 H10 AJQ 62 
AJQ H11 H11 H 0 1 N N N -21.297 0.614  1.767  -5.735  -1.301 -1.106 H11 AJQ 63 
AJQ H12 H12 H 0 1 N N N -22.462 -1.565 1.512  -4.894  -1.139 -3.499 H12 AJQ 64 
AJQ H13 H13 H 0 1 N N N -22.111 -1.538 -0.250 -5.504  0.533  -3.542 H13 AJQ 65 
AJQ H14 H14 H 0 1 N N N -25.626 -1.826 -2.052 -3.984  -1.626 0.444  H14 AJQ 66 
AJQ H15 H15 H 0 1 N N N -23.197 -3.102 -4.364 1.098   -2.673 -2.141 H15 AJQ 67 
AJQ H16 H16 H 0 1 N N N -19.282 2.114  -5.302 1.341   -1.478 3.526  H16 AJQ 68 
AJQ H17 H17 H 0 1 N N N -24.733 2.910  -4.689 5.195   0.897  3.262  H17 AJQ 69 
AJQ H18 H18 H 0 1 N N N -23.751 2.028  -3.471 4.464   -0.692 3.586  H18 AJQ 70 
AJQ H19 H19 H 0 1 N N N -22.556 4.485  -4.763 5.270   -1.463 1.325  H19 AJQ 71 
AJQ H20 H20 H 0 1 N N N -21.625 2.760  -2.883 6.861   -0.902 3.707  H20 AJQ 72 
AJQ H21 H21 H 0 1 N N N -20.496 4.648  -2.062 7.848   -2.949 2.970  H21 AJQ 73 
AJQ H22 H22 H 0 1 N N N -23.494 2.882  -1.408 8.437   0.458  2.614  H22 AJQ 74 
AJQ H23 H23 H 0 1 N N N -22.760 4.229  0.355  9.613   -1.655 2.720  H23 AJQ 75 
AJQ H24 H24 H 0 1 N N N -23.527 5.904  -1.625 7.669   -0.837 -0.063 H24 AJQ 76 
AJQ H25 H25 H 0 1 N N N -29.013 3.194  0.180  9.393   5.085  0.549  H25 AJQ 77 
AJQ H26 H26 H 0 1 N N N -28.617 2.512  -1.434 9.261   5.069  -1.227 H26 AJQ 78 
AJQ H27 H27 H 0 1 N N N -27.793 1.884  0.033  7.790   5.042  -0.225 H27 AJQ 79 
AJQ H28 H28 H 0 1 N N N -25.357 9.263  0.726  12.826  -0.417 -2.914 H28 AJQ 80 
AJQ H29 H29 H 0 1 N N N -26.852 9.340  1.598  11.789  -1.521 -2.187 H29 AJQ 81 
AJQ H30 H30 H 0 1 N N N -28.287 7.514  1.623  12.446  1.880  -2.702 H30 AJQ 82 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
AJQ O10 P3  DOUB N N 1  
AJQ S3  P3  SING N N 2  
AJQ S3  C16 SING N N 3  
AJQ P3  O11 SING N N 4  
AJQ P3  O9  SING N N 5  
AJQ S2  P2  SING N N 6  
AJQ C16 C17 SING N N 7  
AJQ C17 O12 SING N N 8  
AJQ C17 C18 SING N N 9  
AJQ O9  P2  SING N N 10 
AJQ O12 C20 SING N N 11 
AJQ P2  O7  SING N N 12 
AJQ P2  O8  DOUB N N 13 
AJQ C18 O13 SING N N 14 
AJQ C18 C19 SING N N 15 
AJQ O7  P1  SING N N 16 
AJQ C20 C19 SING N N 17 
AJQ C20 N6  SING N N 18 
AJQ O5  P1  DOUB N N 19 
AJQ O6  P1  SING N N 20 
AJQ C19 O14 SING N N 21 
AJQ P1  S1  SING N N 22 
AJQ N4  C10 DOUB Y N 23 
AJQ N4  C9  SING Y N 24 
AJQ C4  N6  SING Y N 25 
AJQ C4  N7  DOUB Y N 26 
AJQ O3  C12 SING N N 27 
AJQ N6  C1  SING Y N 28 
AJQ O1  C6  DOUB N N 29 
AJQ C10 N5  SING Y N 30 
AJQ C12 C13 SING N N 31 
AJQ C12 C11 SING N N 32 
AJQ C9  C6  SING N N 33 
AJQ C9  C8  DOUB Y N 34 
AJQ N7  C21 SING N N 35 
AJQ N7  C2  SING Y N 36 
AJQ C6  N1  SING N N 37 
AJQ C1  N8  SING N N 38 
AJQ C1  C2  DOUB Y N 39 
AJQ C13 O4  SING N N 40 
AJQ C13 C14 SING N N 41 
AJQ N5  C8  SING Y N 42 
AJQ N5  C11 SING N N 43 
AJQ N8  C5  DOUB N N 44 
AJQ C2  C3  SING N N 45 
AJQ C8  N3  SING N N 46 
AJQ N1  C7  DOUB N N 47 
AJQ C11 O2  SING N N 48 
AJQ S1  C15 SING N N 49 
AJQ C15 C14 SING N N 50 
AJQ C5  N9  SING N N 51 
AJQ C5  N10 SING N N 52 
AJQ C3  N10 SING N N 53 
AJQ C3  O15 DOUB N N 54 
AJQ N3  C7  SING N N 55 
AJQ C7  N2  SING N N 56 
AJQ C14 O2  SING N N 57 
AJQ C4  H1  SING N N 58 
AJQ N2  H2  SING N N 59 
AJQ N2  H3  SING N N 60 
AJQ N3  H4  SING N N 61 
AJQ C10 H5  SING N N 62 
AJQ C11 H6  SING N N 63 
AJQ C12 H7  SING N N 64 
AJQ O3  H8  SING N N 65 
AJQ C13 H9  SING N N 66 
AJQ O4  H10 SING N N 67 
AJQ C14 H11 SING N N 68 
AJQ C15 H12 SING N N 69 
AJQ C15 H13 SING N N 70 
AJQ O6  H14 SING N N 71 
AJQ S2  H15 SING N N 72 
AJQ O11 H16 SING N N 73 
AJQ C16 H17 SING N N 74 
AJQ C16 H18 SING N N 75 
AJQ C17 H19 SING N N 76 
AJQ C18 H20 SING N N 77 
AJQ O13 H21 SING N N 78 
AJQ C19 H22 SING N N 79 
AJQ O14 H23 SING N N 80 
AJQ C20 H24 SING N N 81 
AJQ C21 H25 SING N N 82 
AJQ C21 H26 SING N N 83 
AJQ C21 H27 SING N N 84 
AJQ N9  H28 SING N N 85 
AJQ N9  H29 SING N N 86 
AJQ N10 H30 SING N N 87 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
AJQ InChI            InChI                1.03  
;InChI=1S/C21H29N10O15P3S3/c1-29-5-31(15-9(29)17(37)28-21(23)26-15)19-13(35)11(33)7(44-19)3-52-48(40,41)46-49(42,50)45-47(38,39)51-2-6-10(32)12(34)18(43-6)30-4-24-8-14(30)25-20(22)27-16(8)36/h4-7,10-13,18-19,32-35H,2-3H2,1H3,(H8-,22,23,25,26,27,28,36,37,38,39,40,41,42,50)/p+1/t6-,7-,10-,11-,12-,13-,18-,19-,49-/m1/s1
;
AJQ InChIKey         InChI                1.03  UOUACWJATBZTPY-ACTLBPNMSA-O 
AJQ SMILES_CANONICAL CACTVS               3.385 "C[n+]1cn([C@@H]2O[C@H](CS[P](O)(=O)O[P@@](S)(=O)O[P](O)(=O)SC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5C(=O)N=C(N)Nc45)[C@@H](O)[C@H]2O)c6N=C(N)NC(=O)c16" 
AJQ SMILES           CACTVS               3.385 "C[n+]1cn([CH]2O[CH](CS[P](O)(=O)O[P](S)(=O)O[P](O)(=O)SC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5C(=O)N=C(N)Nc45)[CH](O)[CH]2O)c6N=C(N)NC(=O)c16" 
AJQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[n+]1cn(c2c1C(=O)NC(=N2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)CSP(=O)(O)O[P@@](=O)(OP(=O)(O)SC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5NC(=NC6=O)N)O)O)S)O)O" 
AJQ SMILES           "OpenEye OEToolkits" 2.0.6 "C[n+]1cn(c2c1C(=O)NC(=N2)N)C3C(C(C(O3)CSP(=O)(O)OP(=O)(OP(=O)(O)SCC4C(C(C(O4)n5cnc6c5NC(=NC6=O)N)O)O)S)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
AJQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
;[(2~{S},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl-[[[(2~{S},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl-oxidanyl-phosphoryl]oxy-sulfanyl-phosphoryl]oxy-phosphinic acid
;
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
AJQ "Create component" 2017-08-21 EBI  
AJQ "Initial release"  2018-05-02 RCSB 
# 
