data_A1AMQ
# 
_chem_comp.id                                    A1AMQ 
_chem_comp.name                                  "4-{[(S)-cyclopropyl(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6~-benzothiopyran-7-yl)methyl]amino}-N-ethyl-7H-pyrrolo[2,3-d]pyrimidine-6-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H25 N5 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-04-15 
_chem_comp.pdbx_modified_date                    2024-05-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        439.531 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AMQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7H0L 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AMQ N1  N1  N 0 1 N N N N N N -9.940  -8.662  18.123 0.375  -0.740 0.408  N1  A1AMQ 1  
A1AMQ N3  N2  N 0 1 Y N N N N N -12.434 -5.782  19.810 3.522  -2.698 -1.342 N3  A1AMQ 2  
A1AMQ C4  C1  C 0 1 Y N N N N N -13.016 -9.161  18.775 3.234  0.463  0.184  C4  A1AMQ 3  
A1AMQ C5  C2  C 0 1 Y N N N N N -12.153 -8.024  18.885 2.712  -0.776 -0.242 C5  A1AMQ 4  
A1AMQ C6  C3  C 0 1 Y N N N N N -10.786 -7.719  18.628 1.444  -1.387 -0.178 C6  A1AMQ 5  
A1AMQ C7  C4  C 0 1 N N S N N N -8.579  -8.429  17.654 -0.935 -1.392 0.464  C7  A1AMQ 6  
A1AMQ C8  C5  C 0 1 Y N N N N N -8.490  -8.286  16.148 -2.014 -0.344 0.563  C8  A1AMQ 7  
A1AMQ C10 C6  C 0 1 Y N N N N N -7.774  -7.052  14.213 -2.826 1.720  1.449  C10 A1AMQ 8  
A1AMQ C13 C7  C 0 1 Y N N N N N -8.951  -9.288  15.301 -3.195 -0.493 -0.135 C13 A1AMQ 9  
A1AMQ C15 C8  C 0 1 N N N N N N -8.959  -8.656  11.008 -6.040 2.772  -0.195 C15 A1AMQ 10 
A1AMQ C17 C9  C 0 1 N N N N N N -7.624  -9.516  18.177 -0.998 -2.306 1.690  C17 A1AMQ 11 
A1AMQ C20 C10 C 0 1 Y N N N N N -11.144 -5.618  19.488 2.320  -3.228 -1.259 C20 A1AMQ 12 
A1AMQ C21 C11 C 0 1 Y N N N N N -12.898 -7.001  19.495 3.767  -1.485 -0.853 C21 A1AMQ 13 
A1AMQ O2  O1  O 0 1 N N N N N N -9.172  -11.674 13.470 -5.272 0.564  -2.332 O2  A1AMQ 14 
A1AMQ S   S1  S 0 1 N N N N N N -9.597  -10.392 12.974 -5.656 0.224  -1.008 S   A1AMQ 15 
A1AMQ O1  O2  O 0 1 N N N N N N -11.008 -10.126 12.927 -6.078 -1.093 -0.680 O1  A1AMQ 16 
A1AMQ C14 C12 C 0 1 N N N N N N -8.926  -10.135 11.373 -6.815 1.455  -0.341 C14 A1AMQ 17 
A1AMQ C16 C13 C 0 1 N N N N N N -7.967  -7.895  11.863 -5.052 2.647  0.949  C16 A1AMQ 18 
A1AMQ C11 C14 C 0 1 Y N N N N N -8.222  -8.041  13.342 -4.023 1.574  0.749  C11 A1AMQ 19 
A1AMQ C9  C15 C 0 1 Y N N N N N -7.908  -7.169  15.582 -1.831 0.772  1.358  C9  A1AMQ 20 
A1AMQ C12 C16 C 0 1 Y N N N N N -8.839  -9.155  13.922 -4.193 0.467  -0.050 C12 A1AMQ 21 
A1AMQ C19 C17 C 0 1 N N N N N N -7.061  -9.453  19.563 0.155  -2.223 2.692  C19 A1AMQ 22 
A1AMQ C18 C18 C 0 1 N N N N N N -6.183  -9.172  18.392 0.023  -3.441 1.777  C18 A1AMQ 23 
A1AMQ N2  N3  N 0 1 Y N N N N N -10.298 -6.494  18.930 1.302  -2.603 -0.697 N2  A1AMQ 24 
A1AMQ N4  N4  N 0 1 Y N N N N N -14.154 -7.489  19.767 4.879  -0.693 -0.792 N4  A1AMQ 25 
A1AMQ C3  C19 C 0 1 Y N N N N N -14.221 -8.804  19.334 4.550  0.493  -0.159 C3  A1AMQ 26 
A1AMQ C2  C20 C 0 1 N N N N N N -15.427 -9.639  19.569 5.473  1.606  0.101  C2  A1AMQ 27 
A1AMQ O   O3  O 0 1 N N N N N N -15.459 -10.813 19.192 5.076  2.606  0.667  O   A1AMQ 28 
A1AMQ N   N5  N 0 1 N N N N N N -16.449 -9.056  20.200 6.761  1.518  -0.289 N   A1AMQ 29 
A1AMQ C1  C21 C 0 1 N N N N N N -17.700 -9.761  20.498 7.682  2.627  -0.030 C1  A1AMQ 30 
A1AMQ C   C22 C 0 1 N N N N N N -17.607 -10.549 21.780 9.070  2.274  -0.568 C   A1AMQ 31 
A1AMQ H9  H1  H 0 1 N N N N N N -9.855  -9.351  18.843 0.493  0.146  0.786  H9  A1AMQ 32 
A1AMQ H8  H2  H 0 1 N N N N N N -12.768 -10.117 18.337 2.688  1.245  0.690  H8  A1AMQ 33 
A1AMQ H   H3  H 0 1 N N N N N N -8.238  -7.477  18.086 -1.085 -1.984 -0.439 H   A1AMQ 34 
A1AMQ H11 H4  H 0 1 N N N N N N -7.308  -6.167  13.806 -2.675 2.592  2.068  H11 A1AMQ 35 
A1AMQ H12 H5  H 0 1 N N N N N N -9.400  -10.177 15.718 -3.343 -1.366 -0.754 H12 A1AMQ 36 
A1AMQ H16 H6  H 0 1 N N N N N N -8.695  -8.536  9.947  -5.498 2.981  -1.118 H16 A1AMQ 37 
A1AMQ H15 H7  H 0 1 N N N N N N -9.970  -8.259  11.181 -6.736 3.585  0.011  H15 A1AMQ 38 
A1AMQ H19 H8  H 0 1 N N N N N N -7.818  -10.527 17.789 -1.996 -2.495 2.085  H19 A1AMQ 39 
A1AMQ H24 H9  H 0 1 N N N N N N -10.729 -4.646  19.709 2.160  -4.214 -1.668 H24 A1AMQ 40 
A1AMQ H14 H10 H 0 1 N N N N N N -7.884  -10.488 11.357 -7.183 1.130  0.632  H14 A1AMQ 41 
A1AMQ H13 H11 H 0 1 N N N N N N -9.517  -10.702 10.638 -7.650 1.590  -1.029 H13 A1AMQ 42 
A1AMQ H17 H12 H 0 1 N N N N N N -6.957  -8.270  11.644 -4.544 3.602  1.076  H17 A1AMQ 43 
A1AMQ H18 H13 H 0 1 N N N N N N -8.027  -6.828  11.602 -5.604 2.422  1.862  H18 A1AMQ 44 
A1AMQ H10 H14 H 0 1 N N N N N N -7.552  -6.374  16.221 -0.910 0.900  1.907  H10 A1AMQ 45 
A1AMQ H22 H15 H 0 1 N N N N N N -6.924  -10.377 20.143 0.958  -1.517 2.479  H22 A1AMQ 46 
A1AMQ H23 H16 H 0 1 N N N N N N -7.354  -8.636  20.239 -0.085 -2.357 3.747  H23 A1AMQ 47 
A1AMQ H20 H17 H 0 1 N N N N N N -5.399  -9.889  18.109 -0.303 -4.378 2.230  H20 A1AMQ 48 
A1AMQ H21 H18 H 0 1 N N N N N N -5.829  -8.148  18.204 0.740  -3.538 0.961  H21 A1AMQ 49 
A1AMQ H1  H19 H 0 1 N N N N N N -14.896 -6.980  20.204 5.756  -0.925 -1.135 H1  A1AMQ 50 
A1AMQ H7  H20 H 0 1 N N N N N N -16.358 -8.101  20.481 7.078  0.720  -0.740 H7  A1AMQ 51 
A1AMQ H6  H21 H 0 1 N N N N N N -17.925 -10.451 19.672 7.317  3.526  -0.528 H6  A1AMQ 52 
A1AMQ H5  H22 H 0 1 N N N N N N -18.511 -9.023  20.591 7.743  2.806  1.043  H5  A1AMQ 53 
A1AMQ H3  H23 H 0 1 N N N N N N -18.563 -11.061 21.966 9.435  1.375  -0.071 H3  A1AMQ 54 
A1AMQ H2  H24 H 0 1 N N N N N N -16.802 -11.294 21.695 9.009  2.095  -1.642 H2  A1AMQ 55 
A1AMQ H4  H25 H 0 1 N N N N N N -17.388 -9.867  22.615 9.755  3.100  -0.376 H4  A1AMQ 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AMQ C   C1  SING N N 1  
A1AMQ C1  N   SING N N 2  
A1AMQ N   C2  SING N N 3  
A1AMQ O   C2  DOUB N N 4  
A1AMQ C2  C3  SING N N 5  
A1AMQ C3  C4  DOUB Y N 6  
A1AMQ C4  C5  SING Y N 7  
A1AMQ C5  C6  DOUB Y N 8  
A1AMQ C6  N1  SING N N 9  
A1AMQ N1  C7  SING N N 10 
A1AMQ C7  C8  SING N N 11 
A1AMQ C8  C9  DOUB Y N 12 
A1AMQ C9  C10 SING Y N 13 
A1AMQ C10 C11 DOUB Y N 14 
A1AMQ C11 C12 SING Y N 15 
A1AMQ C13 C12 DOUB Y N 16 
A1AMQ C8  C13 SING Y N 17 
A1AMQ C12 S   SING N N 18 
A1AMQ O1  S   DOUB N N 19 
A1AMQ S   O2  DOUB N N 20 
A1AMQ C14 S   SING N N 21 
A1AMQ C15 C14 SING N N 22 
A1AMQ C16 C15 SING N N 23 
A1AMQ C11 C16 SING N N 24 
A1AMQ C17 C7  SING N N 25 
A1AMQ C17 C18 SING N N 26 
A1AMQ C18 C19 SING N N 27 
A1AMQ C19 C17 SING N N 28 
A1AMQ N2  C6  SING Y N 29 
A1AMQ C20 N2  DOUB Y N 30 
A1AMQ N3  C20 SING Y N 31 
A1AMQ C21 N3  DOUB Y N 32 
A1AMQ C5  C21 SING Y N 33 
A1AMQ N4  C21 SING Y N 34 
A1AMQ C3  N4  SING Y N 35 
A1AMQ N1  H9  SING N N 36 
A1AMQ C4  H8  SING N N 37 
A1AMQ C7  H   SING N N 38 
A1AMQ C10 H11 SING N N 39 
A1AMQ C13 H12 SING N N 40 
A1AMQ C15 H16 SING N N 41 
A1AMQ C15 H15 SING N N 42 
A1AMQ C17 H19 SING N N 43 
A1AMQ C20 H24 SING N N 44 
A1AMQ C14 H14 SING N N 45 
A1AMQ C14 H13 SING N N 46 
A1AMQ C16 H17 SING N N 47 
A1AMQ C16 H18 SING N N 48 
A1AMQ C9  H10 SING N N 49 
A1AMQ C19 H22 SING N N 50 
A1AMQ C19 H23 SING N N 51 
A1AMQ C18 H20 SING N N 52 
A1AMQ C18 H21 SING N N 53 
A1AMQ N4  H1  SING N N 54 
A1AMQ N   H7  SING N N 55 
A1AMQ C1  H6  SING N N 56 
A1AMQ C1  H5  SING N N 57 
A1AMQ C   H3  SING N N 58 
A1AMQ C   H2  SING N N 59 
A1AMQ C   H4  SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AMQ SMILES           ACDLabs              12.01 "CCNC(=O)c1cc2c([NH]1)ncnc2NC(c1ccc2CCCS(=O)(=O)c2c1)C1CC1"                                                                                                                                       
A1AMQ InChI            InChI                1.06  "InChI=1S/C22H25N5O3S/c1-2-23-22(28)17-11-16-20(26-17)24-12-25-21(16)27-19(14-6-7-14)15-8-5-13-4-3-9-31(29,30)18(13)10-15/h5,8,10-12,14,19H,2-4,6-7,9H2,1H3,(H,23,28)(H2,24,25,26,27)/t19-/m0/s1" 
A1AMQ InChIKey         InChI                1.06  KIBMZTJZRSOFFA-IBGZPJMESA-N                                                                                                                                                                       
A1AMQ SMILES_CANONICAL CACTVS               3.385 "CCNC(=O)c1[nH]c2ncnc(N[C@@H](C3CC3)c4ccc5CCC[S](=O)(=O)c5c4)c2c1"                                                                                                                                
A1AMQ SMILES           CACTVS               3.385 "CCNC(=O)c1[nH]c2ncnc(N[CH](C3CC3)c4ccc5CCC[S](=O)(=O)c5c4)c2c1"                                                                                                                                  
A1AMQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCNC(=O)c1cc2c([nH]1)ncnc2N[C@H](c3ccc4c(c3)S(=O)(=O)CCC4)C5CC5"                                                                                                                                 
A1AMQ SMILES           "OpenEye OEToolkits" 2.0.7 "CCNC(=O)c1cc2c([nH]1)ncnc2NC(c3ccc4c(c3)S(=O)(=O)CCC4)C5CC5"                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AMQ "SYSTEMATIC NAME" ACDLabs              12.01 "4-{[(S)-cyclopropyl(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6~-benzothiopyran-7-yl)methyl]amino}-N-ethyl-7H-pyrrolo[2,3-d]pyrimidine-6-carboxamide"          
A1AMQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[[(~{S})-[1,1-bis(oxidanylidene)-3,4-dihydro-2~{H}-thiochromen-7-yl]-cyclopropyl-methyl]amino]-~{N}-ethyl-7~{H}-pyrrolo[2,3-d]pyrimidine-6-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AMQ "Create component" 2024-04-15 RCSB 
A1AMQ "Initial release"  2024-05-15 RCSB 
# 
