data_9YQ
# 
_chem_comp.id                                    9YQ 
_chem_comp.name                                  "4-(propanoylamino)-~{N}-[4-[(5,8,11-trimethyl-6-oxidanylidene-pyrimido[4,5-b][1,4]benzodiazepin-2-yl)amino]phenyl]benzamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H29 N7 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-08-03 
_chem_comp.pdbx_modified_date                    2017-09-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        535.596 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9YQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5ONE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9YQ C4  C1  C 0 1 Y N N 28.480 -10.438 -4.847 -7.024  0.206  -0.025 C4  9YQ 1  
9YQ C5  C2  C 0 1 N N N 30.640 -9.525  -5.694 -6.718  1.338  2.160  C5  9YQ 2  
9YQ C6  C3  C 0 1 Y N N 29.515 -8.659  -3.675 -4.809  0.456  0.849  C6  9YQ 3  
9YQ N1  N1  N 0 1 Y N N 30.682 -8.672  -3.013 -3.990  1.498  0.766  N1  9YQ 4  
9YQ C7  C4  C 0 1 Y N N 30.738 -8.005  -1.849 -2.693  1.322  0.558  C7  9YQ 5  
9YQ C8  C5  C 0 1 Y N N 33.207 -8.570  -1.416 -0.479  2.263  0.366  C8  9YQ 6  
9YQ N2  N2  N 0 1 N N N 31.930 -7.987  -1.164 -1.865  2.431  0.477  N2  9YQ 7  
9YQ C9  C6  C 0 1 Y N N 34.255 -8.334  -0.529 0.273   3.168  -0.371 C9  9YQ 8  
9YQ C10 C7  C 0 1 Y N N 35.502 -8.898  -0.752 1.639   3.003  -0.481 C10 9YQ 9  
9YQ C11 C8  C 0 1 Y N N 35.721 -9.701  -1.866 2.261   1.931  0.146  C11 9YQ 10 
9YQ C12 C9  C 0 1 N N N 38.207 -9.945  -1.840 4.172   0.524  -0.036 C12 9YQ 11 
9YQ N3  N3  N 0 1 N N N 36.947 -10.365 -2.126 3.647   1.763  0.035  N3  9YQ 12 
9YQ C13 C10 C 0 1 Y N N 39.273 -10.987 -1.959 5.621   0.348  -0.258 C13 9YQ 13 
9YQ C14 C11 C 0 1 Y N N 39.153 -12.161 -1.222 6.167   -0.936 -0.332 C14 9YQ 14 
9YQ C15 C12 C 0 1 Y N N 40.062 -13.192 -1.379 7.518   -1.097 -0.539 C15 9YQ 15 
9YQ N4  N4  N 0 1 N N N 42.022 -14.137 -2.526 9.708   -0.149 -0.886 N4  9YQ 16 
9YQ O2  O1  O 0 1 N N N 25.379 -8.623  -5.032 -6.844  -3.211 0.646  O2  9YQ 17 
9YQ C27 C13 C 0 1 N N N 26.478 -8.838  -4.555 -6.310  -2.142 0.421  C27 9YQ 18 
9YQ C3  C14 C 0 1 Y N N 27.102 -10.192 -4.710 -7.079  -1.156 -0.347 C3  9YQ 19 
9YQ C2  C15 C 0 1 Y N N 26.218 -11.276 -4.747 -7.892  -1.580 -1.404 C2  9YQ 20 
9YQ N6  N5  N 0 1 N N N 27.132 -7.846  -3.850 -5.083  -1.968 0.892  N6  9YQ 21 
9YQ C26 C16 C 0 1 N N N 26.429 -6.563  -3.800 -4.504  -3.085 1.642  C26 9YQ 22 
9YQ C25 C17 C 0 1 Y N N 28.379 -7.970  -3.169 -4.285  -0.834 0.747  C25 9YQ 23 
9YQ N   N6  N 0 1 N N N 29.427 -9.373  -4.884 -6.176  0.658  0.980  N   9YQ 24 
9YQ C28 C18 C 0 1 Y N N 28.934 -11.751 -4.975 -7.808  1.113  -0.726 C28 9YQ 25 
9YQ C29 C19 C 0 1 Y N N 28.031 -12.800 -4.999 -8.616  0.678  -1.757 C29 9YQ 26 
9YQ C1  C20 C 0 1 Y N N 26.665 -12.583 -4.904 -8.652  -0.664 -2.098 C1  9YQ 27 
9YQ C   C21 C 0 1 N N N 25.688 -13.725 -5.034 -9.527  -1.125 -3.235 C   9YQ 28 
9YQ C24 C22 C 0 1 Y N N 28.565 -7.343  -1.937 -2.923  -0.972 0.515  C24 9YQ 29 
9YQ N5  N7  N 0 1 Y N N 29.729 -7.335  -1.271 -2.169  0.114  0.426  N5  9YQ 30 
9YQ C23 C23 C 0 1 Y N N 33.434 -9.368  -2.533 0.144   1.195  0.998  C23 9YQ 31 
9YQ C22 C24 C 0 1 Y N N 34.681 -9.922  -2.758 1.509   1.026  0.884  C22 9YQ 32 
9YQ O1  O2  O 0 1 N N N 38.481 -8.792  -1.512 3.453   -0.449 0.083  O1  9YQ 33 
9YQ C21 C25 C 0 1 Y N N 40.349 -10.855 -2.836 6.448   1.465  -0.400 C21 9YQ 34 
9YQ C20 C26 C 0 1 Y N N 41.262 -11.884 -2.996 7.799   1.297  -0.607 C20 9YQ 35 
9YQ C16 C27 C 0 1 Y N N 41.114 -13.072 -2.283 8.340   0.017  -0.675 C16 9YQ 36 
9YQ C17 C28 C 0 1 N N N 42.036 -15.377 -1.969 10.367  -1.155 -0.277 C17 9YQ 37 
9YQ O   O3  O 0 1 N N N 41.599 -15.637 -0.849 9.755   -1.966 0.386  O   9YQ 38 
9YQ C18 C29 C 0 1 N N N 42.642 -16.427 -2.864 11.862  -1.273 -0.421 C18 9YQ 39 
9YQ C19 C30 C 0 1 N N N 44.108 -16.725 -2.539 12.355  -2.491 0.362  C19 9YQ 40 
9YQ H1  H1  H 0 1 N N N 31.255 -8.617  -5.609 -6.939  0.602  2.933  H1  9YQ 41 
9YQ H2  H2  H 0 1 N N N 31.215 -10.391 -5.335 -5.985  2.052  2.536  H2  9YQ 42 
9YQ H3  H3  H 0 1 N N N 30.361 -9.681  -6.746 -7.632  1.865  1.888  H3  9YQ 43 
9YQ H4  H4  H 0 1 N N N 31.894 -7.457  -0.317 -2.245  3.323  0.497  H4  9YQ 44 
9YQ H5  H5  H 0 1 N N N 34.095 -7.709  0.337  -0.211  4.002  -0.859 H5  9YQ 45 
9YQ H6  H6  H 0 1 N N N 36.307 -8.713  -0.057 2.224   3.707  -1.054 H6  9YQ 46 
9YQ H7  H7  H 0 1 N N N 36.875 -11.255 -2.577 4.229   2.539  0.009  H7  9YQ 47 
9YQ H8  H8  H 0 1 N N N 38.340 -12.269 -0.519 5.529   -1.802 -0.226 H8  9YQ 48 
9YQ H9  H9  H 0 1 N N N 39.955 -14.095 -0.797 7.941   -2.089 -0.596 H9  9YQ 49 
9YQ H10 H10 H 0 1 N N N 42.744 -13.951 -3.193 10.186  0.459  -1.471 H10 9YQ 50 
9YQ H11 H11 H 0 1 N N N 25.158 -11.092 -4.651 -7.924  -2.625 -1.675 H11 9YQ 51 
9YQ H12 H12 H 0 1 N N N 27.023 -5.841  -3.221 -5.221  -3.905 1.684  H12 9YQ 52 
9YQ H13 H13 H 0 1 N N N 26.286 -6.183  -4.822 -3.594  -3.423 1.146  H13 9YQ 53 
9YQ H14 H14 H 0 1 N N N 25.449 -6.700  -3.319 -4.266  -2.758 2.655  H14 9YQ 54 
9YQ H15 H15 H 0 1 N N N 29.993 -11.950 -5.056 -7.784  2.161  -0.465 H15 9YQ 55 
9YQ H16 H16 H 0 1 N N N 28.399 -13.811 -5.094 -9.224  1.387  -2.299 H16 9YQ 56 
9YQ H17 H17 H 0 1 N N N 25.476 -14.142 -4.038 -8.962  -1.090 -4.166 H17 9YQ 57 
9YQ H18 H18 H 0 1 N N N 24.754 -13.359 -5.484 -9.857  -2.147 -3.049 H18 9YQ 58 
9YQ H19 H19 H 0 1 N N N 26.122 -14.507 -5.674 -10.396 -0.472 -3.313 H19 9YQ 59 
9YQ H20 H20 H 0 1 N N N 27.722 -6.834  -1.493 -2.484  -1.953 0.407  H20 9YQ 60 
9YQ H21 H21 H 0 1 N N N 32.630 -9.556  -3.230 -0.441  0.494  1.576  H21 9YQ 61 
9YQ H22 H22 H 0 1 N N N 34.847 -10.531 -3.634 1.993   0.195  1.375  H22 9YQ 62 
9YQ H23 H23 H 0 1 N N N 40.472 -9.940  -3.397 6.029   2.459  -0.348 H23 9YQ 63 
9YQ H24 H24 H 0 1 N N N 42.092 -11.765 -3.676 8.439   2.160  -0.717 H24 9YQ 64 
9YQ H25 H25 H 0 1 N N N 42.579 -16.077 -3.905 12.118  -1.390 -1.474 H25 9YQ 65 
9YQ H26 H26 H 0 1 N N N 42.064 -17.356 -2.754 12.337  -0.373 -0.030 H26 9YQ 66 
9YQ H27 H27 H 0 1 N N N 44.487 -17.496 -3.226 12.100  -2.374 1.415  H27 9YQ 67 
9YQ H28 H28 H 0 1 N N N 44.703 -15.807 -2.654 11.881  -3.391 -0.029 H28 9YQ 68 
9YQ H29 H29 H 0 1 N N N 44.188 -17.086 -1.503 13.437  -2.577 0.258  H29 9YQ 69 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9YQ C5  N   SING N N 1  
9YQ C   C1  SING N N 2  
9YQ O2  C27 DOUB N N 3  
9YQ C29 C28 DOUB Y N 4  
9YQ C29 C1  SING Y N 5  
9YQ C28 C4  SING Y N 6  
9YQ C1  C2  DOUB Y N 7  
9YQ N   C4  SING N N 8  
9YQ N   C6  SING N N 9  
9YQ C4  C3  DOUB Y N 10 
9YQ C2  C3  SING Y N 11 
9YQ C3  C27 SING N N 12 
9YQ C27 N6  SING N N 13 
9YQ N6  C26 SING N N 14 
9YQ N6  C25 SING N N 15 
9YQ C6  C25 DOUB Y N 16 
9YQ C6  N1  SING Y N 17 
9YQ C25 C24 SING Y N 18 
9YQ N1  C7  DOUB Y N 19 
9YQ C20 C21 DOUB Y N 20 
9YQ C20 C16 SING Y N 21 
9YQ C18 C19 SING N N 22 
9YQ C18 C17 SING N N 23 
9YQ C21 C13 SING Y N 24 
9YQ C22 C23 DOUB Y N 25 
9YQ C22 C11 SING Y N 26 
9YQ C23 C8  SING Y N 27 
9YQ N4  C16 SING N N 28 
9YQ N4  C17 SING N N 29 
9YQ C16 C15 DOUB Y N 30 
9YQ N3  C11 SING N N 31 
9YQ N3  C12 SING N N 32 
9YQ C17 O   DOUB N N 33 
9YQ C13 C12 SING N N 34 
9YQ C13 C14 DOUB Y N 35 
9YQ C24 N5  DOUB Y N 36 
9YQ C11 C10 DOUB Y N 37 
9YQ C7  N5  SING Y N 38 
9YQ C7  N2  SING N N 39 
9YQ C12 O1  DOUB N N 40 
9YQ C8  N2  SING N N 41 
9YQ C8  C9  DOUB Y N 42 
9YQ C15 C14 SING Y N 43 
9YQ C10 C9  SING Y N 44 
9YQ C5  H1  SING N N 45 
9YQ C5  H2  SING N N 46 
9YQ C5  H3  SING N N 47 
9YQ N2  H4  SING N N 48 
9YQ C9  H5  SING N N 49 
9YQ C10 H6  SING N N 50 
9YQ N3  H7  SING N N 51 
9YQ C14 H8  SING N N 52 
9YQ C15 H9  SING N N 53 
9YQ N4  H10 SING N N 54 
9YQ C2  H11 SING N N 55 
9YQ C26 H12 SING N N 56 
9YQ C26 H13 SING N N 57 
9YQ C26 H14 SING N N 58 
9YQ C28 H15 SING N N 59 
9YQ C29 H16 SING N N 60 
9YQ C   H17 SING N N 61 
9YQ C   H18 SING N N 62 
9YQ C   H19 SING N N 63 
9YQ C24 H20 SING N N 64 
9YQ C23 H21 SING N N 65 
9YQ C22 H22 SING N N 66 
9YQ C21 H23 SING N N 67 
9YQ C20 H24 SING N N 68 
9YQ C18 H25 SING N N 69 
9YQ C18 H26 SING N N 70 
9YQ C19 H27 SING N N 71 
9YQ C19 H28 SING N N 72 
9YQ C19 H29 SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9YQ InChI            InChI                1.03  "InChI=1S/C30H29N7O3/c1-5-26(38)32-20-9-7-19(8-10-20)28(39)33-21-11-13-22(14-12-21)34-30-31-17-25-27(35-30)36(3)24-15-6-18(2)16-23(24)29(40)37(25)4/h6-17H,5H2,1-4H3,(H,32,38)(H,33,39)(H,31,34,35)" 
9YQ InChIKey         InChI                1.03  KGXBCWANASZZQG-UHFFFAOYSA-N                                                                                                                                                                          
9YQ SMILES_CANONICAL CACTVS               3.385 "CCC(=O)Nc1ccc(cc1)C(=O)Nc2ccc(Nc3ncc4N(C)C(=O)c5cc(C)ccc5N(C)c4n3)cc2"                                                                                                                              
9YQ SMILES           CACTVS               3.385 "CCC(=O)Nc1ccc(cc1)C(=O)Nc2ccc(Nc3ncc4N(C)C(=O)c5cc(C)ccc5N(C)c4n3)cc2"                                                                                                                              
9YQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCC(=O)Nc1ccc(cc1)C(=O)Nc2ccc(cc2)Nc3ncc4c(n3)N(c5ccc(cc5C(=O)N4C)C)C"                                                                                                                              
9YQ SMILES           "OpenEye OEToolkits" 2.0.6 "CCC(=O)Nc1ccc(cc1)C(=O)Nc2ccc(cc2)Nc3ncc4c(n3)N(c5ccc(cc5C(=O)N4C)C)C"                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9YQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-(propanoylamino)-~{N}-[4-[(5,8,11-trimethyl-6-oxidanylidene-pyrimido[4,5-b][1,4]benzodiazepin-2-yl)amino]phenyl]benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9YQ "Create component" 2017-08-03 RCSB 
9YQ "Initial release"  2017-09-06 RCSB 
# 
