data_88Q
# 
_chem_comp.id                                    88Q 
_chem_comp.name                                  "1,5:6,10-dianhydro-3,4,7,8-tetradeoxy-2,9-bis-C-(hydroxymethyl)-L-manno-decitol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H22 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-02-15 
_chem_comp.pdbx_modified_date                    2014-09-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        262.299 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     88Q 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4AIZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
88Q O5   O5   O 0 1 N N N 21.015 -12.607 -31.604 -3.096 2.384  0.131  O5   88Q 1  
88Q C11  C11  C 0 1 N N N 20.209 -11.879 -30.705 -2.935 1.267  -0.745 C11  88Q 2  
88Q C10  C10  C 0 1 N N S 21.063 -11.379 -29.560 -3.307 -0.020 -0.006 C10  88Q 3  
88Q C9   C9   C 0 1 N N N 20.145 -10.756 -28.531 -3.017 -1.227 -0.902 C9   88Q 4  
88Q C8   C8   C 0 1 N N N 20.949 -10.368 -27.333 -1.514 -1.287 -1.188 C8   88Q 5  
88Q O4   O4   O 0 1 N N N 22.039 -10.451 -30.022 -4.697 0.006  0.327  O4   88Q 6  
88Q C12  C12  C 0 1 N N N 21.697 -12.519 -29.033 -2.476 -0.132 1.275  C12  88Q 7  
88Q O6   O6   O 0 1 N N N 22.609 -12.288 -28.033 -1.090 -0.215 0.936  O6   88Q 8  
88Q C7   C7   C 0 1 N N S 22.315 -11.039 -27.328 -0.752 -1.351 0.138  C7   88Q 9  
88Q C5   C5   C 0 1 N N S 22.316 -11.533 -25.969 0.753  -1.351 -0.138 C5   88Q 10 
88Q O3   O3   O 0 1 N N N 22.547 -10.336 -25.357 1.091  -0.214 -0.935 O3   88Q 11 
88Q C6   C6   C 0 1 N N N 21.661 -9.962  -24.368 2.477  -0.130 -1.275 C6   88Q 12 
88Q C4   C4   C 0 1 N N N 20.957 -12.240 -25.998 1.515  -1.288 1.188  C4   88Q 13 
88Q C3   C3   C 0 1 N N N 20.095 -11.787 -24.866 3.019  -1.227 0.901  C3   88Q 14 
88Q C2   C2   C 0 1 N N S 20.976 -11.181 -23.805 3.308  -0.018 0.006  C2   88Q 15 
88Q O2   O2   O 0 1 N N N 21.941 -12.119 -23.345 4.698  0.007  -0.327 O2   88Q 16 
88Q C1   C1   C 0 1 N N N 20.098 -10.716 -22.676 2.935  1.268  0.747  C1   88Q 17 
88Q O1   O1   O 0 1 N N N 20.903 -10.020 -21.756 3.089  2.385  -0.131 O1   88Q 18 
88Q H5   H5   H 0 1 N N N 20.482 -12.922 -32.324 -2.877 3.235  -0.272 H5   88Q 19 
88Q H111 H111 H 0 0 N N N 19.757 -11.023 -31.227 -3.585 1.389  -1.612 H111 88Q 20 
88Q H112 H112 H 0 0 N N N 19.414 -12.531 -30.313 -1.897 1.210  -1.074 H112 88Q 21 
88Q H91C H91C H 0 0 N N N 19.665 -9.863  -28.958 -3.329 -2.141 -0.395 H91C 88Q 22 
88Q H92C H92C H 0 0 N N N 19.373 -11.483 -28.237 -3.564 -1.125 -1.839 H92C 88Q 23 
88Q H4   H4   H 0 1 N N N 22.563 -10.150 -29.289 -4.952 0.746  0.895  H4   88Q 24 
88Q H121 H121 H 0 0 N N N 20.917 -13.183 -28.632 -2.646 0.746  1.897  H121 88Q 25 
88Q H122 H122 H 0 0 N N N 22.221 -13.025 -29.857 -2.770 -1.028 1.822  H122 88Q 26 
88Q H81C H81C H 0 0 N N N 21.088 -9.277  -27.336 -1.291 -2.175 -1.780 H81C 88Q 27 
88Q H82C H82C H 0 0 N N N 20.403 -10.666 -26.426 -1.212 -0.396 -1.739 H82C 88Q 28 
88Q H7   H7   H 0 1 N N N 23.109 -10.294 -27.488 -1.024 -2.263 0.670  H7   88Q 29 
88Q HA   HA   H 0 1 N N N 23.123 -12.262 -25.804 1.025  -2.262 -0.671 HA   88Q 30 
88Q H41C H41C H 0 0 N N N 20.453 -12.011 -26.948 1.214  -0.397 1.739  H41C 88Q 31 
88Q H42C H42C H 0 0 N N N 21.114 -13.326 -25.918 1.293  -2.176 1.779  H42C 88Q 32 
88Q H61C H61C H 0 0 N N N 22.208 -9.447  -23.564 2.772  -1.026 -1.822 H61C 88Q 33 
88Q H62C H62C H 0 0 N N N 20.907 -9.283  -24.792 2.647  0.749  -1.896 H62C 88Q 34 
88Q H31C H31C H 0 0 N N N 19.376 -11.035 -25.225 3.565  -1.125 1.839  H31C 88Q 35 
88Q H32C H32C H 0 0 N N N 19.549 -12.646 -24.449 3.331  -2.139 0.393  H32C 88Q 36 
88Q H2   H2   H 0 1 N N N 21.499 -12.882 -22.993 4.952  0.746  -0.898 H2   88Q 37 
88Q H11C H11C H 0 0 N N N 19.313 -10.050 -23.064 1.900  1.207  1.080  H11C 88Q 38 
88Q H12C H12C H 0 0 N N N 19.633 -11.583 -22.184 3.589  1.392  1.610  H12C 88Q 39 
88Q H1   H1   H 0 1 N N N 20.368 -9.716  -21.032 2.869  3.236  0.273  H1   88Q 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
88Q O5  C11  SING N N 1  
88Q C11 C10  SING N N 2  
88Q C10 C9   SING N N 3  
88Q C10 O4   SING N N 4  
88Q C10 C12  SING N N 5  
88Q C9  C8   SING N N 6  
88Q C8  C7   SING N N 7  
88Q C12 O6   SING N N 8  
88Q O6  C7   SING N N 9  
88Q C7  C5   SING N N 10 
88Q C5  O3   SING N N 11 
88Q C5  C4   SING N N 12 
88Q O3  C6   SING N N 13 
88Q C6  C2   SING N N 14 
88Q C4  C3   SING N N 15 
88Q C3  C2   SING N N 16 
88Q C2  O2   SING N N 17 
88Q C2  C1   SING N N 18 
88Q C1  O1   SING N N 19 
88Q O5  H5   SING N N 20 
88Q C11 H111 SING N N 21 
88Q C11 H112 SING N N 22 
88Q C9  H91C SING N N 23 
88Q C9  H92C SING N N 24 
88Q O4  H4   SING N N 25 
88Q C12 H121 SING N N 26 
88Q C12 H122 SING N N 27 
88Q C8  H81C SING N N 28 
88Q C8  H82C SING N N 29 
88Q C7  H7   SING N N 30 
88Q C5  HA   SING N N 31 
88Q C4  H41C SING N N 32 
88Q C4  H42C SING N N 33 
88Q C6  H61C SING N N 34 
88Q C6  H62C SING N N 35 
88Q C3  H31C SING N N 36 
88Q C3  H32C SING N N 37 
88Q O2  H2   SING N N 38 
88Q C1  H11C SING N N 39 
88Q C1  H12C SING N N 40 
88Q O1  H1   SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
88Q SMILES           ACDLabs              12.01 "OCC1(O)CCC(OC1)C2OCC(O)(CO)CC2"                                                                                 
88Q InChI            InChI                1.03  "InChI=1S/C12H22O6/c13-5-11(15)3-1-9(17-7-11)10-2-4-12(16,6-14)8-18-10/h9-10,13-16H,1-8H2/t9-,10-,11-,12-/m0/s1" 
88Q InChIKey         InChI                1.03  FJMBBGDZFKPKCM-BJDJZHNGSA-N                                                                                      
88Q SMILES_CANONICAL CACTVS               3.385 "OC[C@@]1(O)CC[C@H](OC1)[C@@H]2CC[C@](O)(CO)CO2"                                                                 
88Q SMILES           CACTVS               3.385 "OC[C]1(O)CC[CH](OC1)[CH]2CC[C](O)(CO)CO2"                                                                       
88Q SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C1C[C@@](CO[C@@H]1[C@@H]2CC[C@@](CO2)(CO)O)(CO)O"                                                               
88Q SMILES           "OpenEye OEToolkits" 1.9.2 "C1CC(COC1C2CCC(CO2)(CO)O)(CO)O"                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
88Q "SYSTEMATIC NAME" ACDLabs              12.01 "(2S,2'S,5S,5'S)-5,5'-bis(hydroxymethyl)octahydro-2H,2'H-2,2'-bipyran-5,5'-diol"        
88Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(3S,6S)-3-(hydroxymethyl)-6-[(2S,5S)-5-(hydroxymethyl)-5-oxidanyl-oxan-2-yl]oxan-3-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
88Q "Create component"  2012-02-15 EBI  
88Q "Initial release"   2013-03-06 RCSB 
88Q "Modify descriptor" 2014-09-05 RCSB 
# 
