data_5ZQ
# 
_chem_comp.id                                    5ZQ 
_chem_comp.name                                  "2-[(6S,10S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl]-N-[(pyridin-2-yl)methyl]acetamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H23 Cl N6 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-07-29 
_chem_comp.pdbx_modified_date                    2022-07-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        491.008 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5ZQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7RN2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5ZQ N1  N1  N  0 1 N N N 29.474 15.947 -2.864 -0.909 0.298  1.782  N1  5ZQ 1  
5ZQ N3  N2  N  0 1 Y N N 30.684 13.725 -6.550 5.174  -1.673 -0.844 N3  5ZQ 2  
5ZQ C4  C1  C  0 1 N N N 25.412 14.723 -1.710 -0.920 -1.306 -2.155 C4  5ZQ 3  
5ZQ C5  C2  C  0 1 Y N N 27.594 15.881 -1.095 -1.282 0.760  -0.614 C5  5ZQ 4  
5ZQ C6  C3  C  0 1 N N N 28.076 15.835 -2.524 -1.378 -0.038 0.624  C6  5ZQ 5  
5ZQ C7  C4  C  0 1 Y N N 27.285 16.492 -3.641 -2.077 -1.341 0.534  C7  5ZQ 6  
5ZQ C8  C5  C  0 1 Y N N 26.189 17.449 -3.248 -1.671 -2.410 1.332  C8  5ZQ 7  
5ZQ C10 C6  C  0 1 Y N N 25.720 17.750 -5.591 -3.382 -3.777 0.363  C10 5ZQ 8  
5ZQ C13 C7  C  0 1 N N S 30.402 15.347 -1.900 -0.110 1.509  1.985  C13 5ZQ 9  
5ZQ C15 C8  C  0 1 N N N 31.397 13.682 -3.415 2.013  0.331  1.482  C15 5ZQ 10 
5ZQ C17 C9  C  0 1 Y N N 31.381 12.413 -6.448 5.241  -1.043 0.313  C17 5ZQ 11 
5ZQ C20 C10 C  0 1 Y N N 30.218 11.704 -8.477 7.513  -0.455 -0.125 C20 5ZQ 12 
5ZQ C21 C11 C  0 1 Y N N 31.169 11.456 -7.345 6.407  -0.415 0.710  C21 5ZQ 13 
5ZQ C22 C12 C  0 1 Y N N 28.336 16.410 -0.172 -1.388 2.133  -0.676 C22 5ZQ 14 
5ZQ C24 C13 C  0 1 Y N N 30.201 17.945 0.616  -2.200 4.124  0.567  C24 5ZQ 15 
5ZQ C1  C14 C  0 1 N N N 24.858 15.104 1.339  -0.937 0.715  -4.374 C1  5ZQ 16 
5ZQ C11 C15 C  0 1 Y N N 26.659 16.902 -5.969 -3.797 -2.716 -0.424 C11 5ZQ 17 
5ZQ C12 C16 C  0 1 Y N N 27.500 16.216 -4.915 -3.147 -1.502 -0.347 C12 5ZQ 18 
5ZQ C14 C17 C  0 1 N N N 31.677 14.938 -2.582 1.117  1.472  1.072  C14 5ZQ 19 
5ZQ C16 C18 C  0 1 N N N 32.345 12.171 -5.277 4.032  -1.006 1.212  C16 5ZQ 20 
5ZQ C18 C19 C  0 1 Y N N 29.864 13.940 -7.522 6.206  -1.731 -1.663 C18 5ZQ 21 
5ZQ C19 C20 C  0 1 Y N N 29.613 12.842 -8.570 7.405  -1.127 -1.333 C19 5ZQ 22 
5ZQ C2  C21 C  0 1 Y N N 26.058 15.474 0.508  -1.102 1.057  -2.916 C2  5ZQ 23 
5ZQ C23 C22 C  0 1 Y N N 30.667 16.432 -0.896 -0.949 2.715  1.652  C23 5ZQ 24 
5ZQ C25 C23 C  0 1 N N N 29.464 18.799 1.661  -3.012 4.809  -0.502 C25 5ZQ 25 
5ZQ C3  C24 C  0 1 Y N N 26.431 15.400 -0.762 -1.099 0.174  -1.931 C3  5ZQ 26 
5ZQ C9  C25 C  0 1 Y N N 25.452 18.053 -4.160 -2.325 -3.621 1.244  C9  5ZQ 27 
5ZQ N2  N3  N  0 1 N N N 32.409 13.358 -4.404 3.161  0.103  0.814  N2  5ZQ 28 
5ZQ N4  N4  N  0 1 Y N N 29.646 16.931 -0.121 -1.520 2.959  0.443  N4  5ZQ 29 
5ZQ N5  N5  N  0 1 Y N N 31.772 17.098 -0.649 -1.270 3.705  2.434  N5  5ZQ 30 
5ZQ N6  N6  N  0 1 Y N N 31.502 18.092 0.339  -2.014 4.540  1.794  N6  5ZQ 31 
5ZQ O1  O1  O  0 1 N N N 30.431 12.985 -3.241 1.701  -0.382 2.412  O1  5ZQ 32 
5ZQ S1  S1  S  0 1 Y N N 27.457 16.262 1.398  -1.324 2.679  -2.291 S1  5ZQ 33 
5ZQ CL1 CL1 CL 0 0 N N N 24.632 18.528 -6.725 -4.201 -5.305 0.257  CL1 5ZQ 34 
5ZQ H5  H3  H  0 1 N N N 25.609 13.642 -1.749 -1.884 -1.756 -2.393 H5  5ZQ 35 
5ZQ H6  H4  H  0 1 N N N 24.392 14.896 -1.336 -0.230 -1.467 -2.983 H6  5ZQ 36 
5ZQ H4  H5  H  0 1 N N N 25.510 15.150 -2.719 -0.518 -1.764 -1.252 H4  5ZQ 37 
5ZQ H7  H7  H  0 1 N N N 26.004 17.644 -2.202 -0.846 -2.289 2.019  H7  5ZQ 38 
5ZQ H11 H8  H  0 1 N N N 29.941 14.479 -1.407 0.210  1.564  3.026  H11 5ZQ 39 
5ZQ H19 H9  H  0 1 N N N 30.039 10.934 -9.213 8.438  0.026  0.159  H19 5ZQ 40 
5ZQ H20 H10 H  0 1 N N N 31.678 10.507 -7.259 6.455  0.100  1.658  H20 5ZQ 41 
5ZQ H3  H11 H  0 1 N N N 25.037 15.384 2.388  -0.978 1.628  -4.968 H3  5ZQ 42 
5ZQ H1  H12 H  0 1 N N N 23.973 15.638 0.963  0.025  0.225  -4.526 H1  5ZQ 43 
5ZQ H2  H13 H  0 1 N N N 24.687 14.019 1.273  -1.739 0.044  -4.683 H2  5ZQ 44 
5ZQ H9  H14 H  0 1 N N N 26.824 16.701 -7.017 -4.622 -2.843 -1.109 H9  5ZQ 45 
5ZQ H10 H15 H  0 1 N N N 28.266 15.510 -5.200 -3.465 -0.677 -0.967 H10 5ZQ 46 
5ZQ H13 H16 H  0 1 N N N 32.448 14.720 -1.829 0.798  1.330  0.040  H13 5ZQ 47 
5ZQ H12 H17 H  0 1 N N N 32.024 15.750 -3.238 1.663  2.411  1.159  H12 5ZQ 48 
5ZQ H16 H18 H  0 1 N N N 31.993 11.310 -4.691 3.487  -1.945 1.126  H16 5ZQ 49 
5ZQ H15 H19 H  0 1 N N N 33.349 11.959 -5.673 4.352  -0.864 2.244  H15 5ZQ 50 
5ZQ H17 H20 H  0 1 N N N 29.354 14.889 -7.600 6.114  -2.257 -2.601 H17 5ZQ 51 
5ZQ H18 H21 H  0 1 N N N 28.929 13.023 -9.386 8.247  -1.178 -2.007 H18 5ZQ 52 
5ZQ H21 H22 H  0 1 N N N 30.167 19.514 2.113  -4.042 4.455  -0.458 H21 5ZQ 53 
5ZQ H22 H23 H  0 1 N N N 28.645 19.349 1.174  -2.990 5.886  -0.340 H22 5ZQ 54 
5ZQ H23 H24 H  0 1 N N N 29.052 18.145 2.444  -2.591 4.580  -1.481 H23 5ZQ 55 
5ZQ H8  H25 H  0 1 N N N 24.676 18.748 -3.876 -2.005 -4.452 1.855  H8  5ZQ 56 
5ZQ H14 H26 H  0 1 N N N 33.192 13.973 -4.498 3.411  0.673  0.070  H14 5ZQ 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5ZQ C19 C20 DOUB Y N 1  
5ZQ C19 C18 SING Y N 2  
5ZQ C20 C21 SING Y N 3  
5ZQ C18 N3  DOUB Y N 4  
5ZQ C21 C17 DOUB Y N 5  
5ZQ CL1 C10 SING N N 6  
5ZQ N3  C17 SING Y N 7  
5ZQ C17 C16 SING N N 8  
5ZQ C11 C10 DOUB Y N 9  
5ZQ C11 C12 SING Y N 10 
5ZQ C10 C9  SING Y N 11 
5ZQ C16 N2  SING N N 12 
5ZQ C12 C7  DOUB Y N 13 
5ZQ N2  C15 SING N N 14 
5ZQ C9  C8  DOUB Y N 15 
5ZQ C7  C8  SING Y N 16 
5ZQ C7  C6  SING N N 17 
5ZQ C15 O1  DOUB N N 18 
5ZQ C15 C14 SING N N 19 
5ZQ N1  C6  DOUB N N 20 
5ZQ N1  C13 SING N N 21 
5ZQ C14 C13 SING N N 22 
5ZQ C6  C5  SING N N 23 
5ZQ C13 C23 SING N N 24 
5ZQ C4  C3  SING N N 25 
5ZQ C5  C3  SING Y N 26 
5ZQ C5  C22 DOUB Y N 27 
5ZQ C23 N5  DOUB Y N 28 
5ZQ C23 N4  SING Y N 29 
5ZQ C3  C2  DOUB Y N 30 
5ZQ N5  N6  SING Y N 31 
5ZQ C22 N4  SING N N 32 
5ZQ C22 S1  SING Y N 33 
5ZQ N4  C24 SING Y N 34 
5ZQ N6  C24 DOUB Y N 35 
5ZQ C2  C1  SING N N 36 
5ZQ C2  S1  SING Y N 37 
5ZQ C24 C25 SING N N 38 
5ZQ C4  H5  SING N N 39 
5ZQ C4  H6  SING N N 40 
5ZQ C4  H4  SING N N 41 
5ZQ C8  H7  SING N N 42 
5ZQ C13 H11 SING N N 43 
5ZQ C20 H19 SING N N 44 
5ZQ C21 H20 SING N N 45 
5ZQ C1  H3  SING N N 46 
5ZQ C1  H1  SING N N 47 
5ZQ C1  H2  SING N N 48 
5ZQ C11 H9  SING N N 49 
5ZQ C12 H10 SING N N 50 
5ZQ C14 H13 SING N N 51 
5ZQ C14 H12 SING N N 52 
5ZQ C16 H16 SING N N 53 
5ZQ C16 H15 SING N N 54 
5ZQ C18 H17 SING N N 55 
5ZQ C19 H18 SING N N 56 
5ZQ C25 H21 SING N N 57 
5ZQ C25 H22 SING N N 58 
5ZQ C25 H23 SING N N 59 
5ZQ C9  H8  SING N N 60 
5ZQ N2  H14 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5ZQ SMILES           ACDLabs              12.01 "Clc1ccc(cc1)C1=NC(CC(=O)NCc2ccccn2)c2nnc(C)n2c2sc(C)c(C)c21"                                                                                                                     
5ZQ InChI            InChI                1.03  "InChI=1S/C25H23ClN6OS/c1-14-15(2)34-25-22(14)23(17-7-9-18(26)10-8-17)29-20(24-31-30-16(3)32(24)25)12-21(33)28-13-19-6-4-5-11-27-19/h4-11,20H,12-13H2,1-3H3,(H,28,33)/t20-/m0/s1" 
5ZQ InChIKey         InChI                1.03  IQSNRFQUNLCFPX-FQEVSTJZSA-N                                                                                                                                                       
5ZQ SMILES_CANONICAL CACTVS               3.385 "Cc1sc2n3c(C)nnc3[C@H](CC(=O)NCc4ccccn4)N=C(c5ccc(Cl)cc5)c2c1C"                                                                                                                   
5ZQ SMILES           CACTVS               3.385 "Cc1sc2n3c(C)nnc3[CH](CC(=O)NCc4ccccn4)N=C(c5ccc(Cl)cc5)c2c1C"                                                                                                                    
5ZQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(sc-2c1C(=N[C@H](c3n2c(nn3)C)CC(=O)NCc4ccccn4)c5ccc(cc5)Cl)C"                                                                                                                
5ZQ SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(sc-2c1C(=NC(c3n2c(nn3)C)CC(=O)NCc4ccccn4)c5ccc(cc5)Cl)C"                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5ZQ "SYSTEMATIC NAME" ACDLabs              12.01 "2-[(6S,10S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl]-N-[(pyridin-2-yl)methyl]acetamide"                             
5ZQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]-~{N}-(pyridin-2-ylmethyl)ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5ZQ "Create component" 2021-07-29 RCSB 
5ZQ "Initial release"  2022-08-03 RCSB 
# 
