data_1RQ
# 
_chem_comp.id                                    1RQ 
_chem_comp.name                                  "cyclopropyl[(3R)-3-({4-[6-hydroxy-2-(naphthalen-2-yl)-1H-benzimidazol-1-yl]pyrimidin-2-yl}amino)piperidin-1-yl]methanone" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H28 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-05-09 
_chem_comp.pdbx_modified_date                    2014-05-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        504.582 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     1RQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4KKH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
1RQ C4  C4  C 0 1 Y N N 4.890  27.133 32.132 -1.853 1.178  0.510  C4  DRG 1  
1RQ C5  C5  C 0 1 Y N N 6.243  27.277 32.469 -1.689 2.126  1.520  C5  DRG 2  
1RQ C6  C6  C 0 1 Y N N 6.752  28.544 32.714 -0.419 2.609  1.772  C6  DRG 3  
1RQ N1  N1  N 0 1 Y N N 5.906  29.647 32.589 0.598  2.161  1.051  N1  DRG 4  
1RQ N3  N3  N 0 1 Y N N 4.143  28.240 31.993 -0.789 0.773  -0.173 N3  DRG 5  
1RQ CAQ CAQ C 0 1 N N N -1.057 33.752 34.160 8.572  0.147  1.094  CAQ DRG 6  
1RQ CAR CAR C 0 1 N N N -1.744 32.437 34.503 8.717  0.233  -0.426 CAR DRG 7  
1RQ CBJ CBJ C 0 1 N N N -0.486 32.437 33.622 7.537  0.915  0.269  CBJ DRG 8  
1RQ CAY CAY C 0 1 N N N -0.692 32.201 32.117 6.176  0.289  0.103  CAY DRG 9  
1RQ OAA OAA O 0 1 N N N -1.819 32.314 31.630 5.935  -0.783 0.616  OAA DRG 10 
1RQ NBK NBK N 0 1 N N N 0.406  31.874 31.389 5.227  0.922  -0.614 NBK DRG 11 
1RQ CAT CAT C 0 1 N N N 1.744  31.738 32.019 3.895  0.325  -0.784 CAT DRG 12 
1RQ CAS CAS C 0 1 N N N 0.268  31.655 29.912 5.502  2.225  -1.236 CAS DRG 13 
1RQ CAO CAO C 0 1 N N N 1.078  30.447 29.413 4.427  3.221  -0.789 CAO DRG 14 
1RQ CAP CAP C 0 1 N N N 2.523  30.471 29.970 3.043  2.651  -1.110 CAP DRG 15 
1RQ CBI CBI C 0 1 N N R 2.484  30.496 31.531 2.838  1.345  -0.349 CBI DRG 16 
1RQ NAX NAX N 0 1 N N N 3.842  30.547 32.084 1.501  0.818  -0.633 NAX DRG 17 
1RQ C2  C2  C 0 1 Y N N 4.627  29.473 32.220 0.413  1.261  0.098  C2  DRG 18 
1RQ NBL NBL N 0 1 Y N N 4.376  25.922 31.860 -3.114 0.659  0.226  NBL DRG 19 
1RQ CBH CBH C 0 1 Y N N 3.389  25.712 30.956 -4.273 1.385  0.015  CBH DRG 20 
1RQ CAN CAN C 0 1 Y N N 2.673  26.552 30.177 -4.572 2.739  0.009  CAN DRG 21 
1RQ CAZ CAZ C 0 1 Y N N 1.687  26.067 29.310 -5.869 3.154  -0.244 CAZ DRG 22 
1RQ OAB OAB O 0 1 N N N 0.958  26.912 28.521 -6.165 4.480  -0.250 OAB DRG 23 
1RQ CAG CAG C 0 1 Y N N 1.452  24.694 29.262 -6.870 2.219  -0.492 CAG DRG 24 
1RQ CAL CAL C 0 1 Y N N 2.220  23.876 30.086 -6.589 0.882  -0.489 CAL DRG 25 
1RQ CBG CBG C 0 1 Y N N 3.156  24.398 30.897 -5.286 0.442  -0.236 CBG DRG 26 
1RQ NAW NAW N 0 1 Y N N 3.987  23.797 31.742 -4.717 -0.787 -0.169 NAW DRG 27 
1RQ CBD CBD C 0 1 Y N N 4.732  24.712 32.332 -3.440 -0.669 0.097  CBD DRG 28 
1RQ CBA CBA C 0 1 Y N N 5.645  24.429 33.277 -2.493 -1.795 0.240  CBA DRG 29 
1RQ CAM CAM C 0 1 Y N N 6.620  23.446 33.118 -2.692 -2.956 -0.486 CAM DRG 30 
1RQ CBF CBF C 0 1 Y N N 7.536  23.207 34.149 -1.789 -4.021 -0.346 CBF DRG 31 
1RQ CAJ CAJ C 0 1 Y N N 8.520  22.238 33.976 -1.957 -5.216 -1.067 CAJ DRG 32 
1RQ CAD CAD C 0 1 Y N N 9.437  22.009 35.006 -1.063 -6.231 -0.909 CAD DRG 33 
1RQ CAC CAC C 0 1 Y N N 9.378  22.743 36.191 0.019  -6.103 -0.040 CAC DRG 34 
1RQ CAI CAI C 0 1 Y N N 8.397  23.710 36.367 0.213  -4.960 0.675  CAI DRG 35 
1RQ CBE CBE C 0 1 Y N N 7.477  23.940 35.348 -0.688 -3.891 0.538  CBE DRG 36 
1RQ CAK CAK C 0 1 Y N N 6.499  24.912 35.526 -0.514 -2.698 1.263  CAK DRG 37 
1RQ CAH CAH C 0 1 Y N N 5.584  25.132 34.495 -1.394 -1.676 1.110  CAH DRG 38 
1RQ H1  H1  H 0 1 N N N 6.883  26.410 32.537 -2.536 2.475  2.093  H1  DRG 39 
1RQ H2  H2  H 0 1 N N N 7.786  28.675 32.997 -0.258 3.344  2.546  H2  DRG 40 
1RQ H3  H3  H 0 1 N N N -0.515 34.308 34.939 8.268  -0.810 1.518  H3  DRG 41 
1RQ H4  H4  H 0 1 N N N -1.542 34.462 33.473 9.266  0.730  1.700  H4  DRG 42 
1RQ H5  H5  H 0 1 N N N -2.723 32.197 34.063 9.507  0.872  -0.821 H5  DRG 43 
1RQ H6  H6  H 0 1 N N N -1.697 32.043 35.529 8.510  -0.669 -1.003 H6  DRG 44 
1RQ H7  H7  H 0 1 N N N 0.448  32.066 34.070 7.550  2.003  0.331  H7  DRG 45 
1RQ H8  H8  H 0 1 N N N 2.343  32.627 31.774 3.742  0.065  -1.832 H8  DRG 46 
1RQ H9  H9  H 0 1 N N N 1.617  31.670 33.110 3.815  -0.572 -0.170 H9  DRG 47 
1RQ H10 H10 H 0 1 N N N 0.621  32.556 29.388 6.483  2.580  -0.921 H10 DRG 48 
1RQ H11 H11 H 0 1 N N N -0.794 31.487 29.679 5.481  2.124  -2.321 H11 DRG 49 
1RQ H12 H12 H 0 1 N N N 0.582  29.522 29.742 4.511  3.389  0.285  H12 DRG 50 
1RQ H13 H13 H 0 1 N N N 1.117  30.471 28.314 4.563  4.165  -1.317 H13 DRG 51 
1RQ H14 H14 H 0 1 N N N 3.060  29.573 29.632 2.278  3.368  -0.815 H14 DRG 52 
1RQ H15 H15 H 0 1 N N N 3.042  31.369 29.603 2.969  2.460  -2.180 H15 DRG 53 
1RQ H16 H16 H 0 1 N N N 1.962  29.596 31.889 2.937  1.528  0.721  H16 DRG 54 
1RQ H17 H17 H 0 1 N N N 4.349  31.184 31.503 1.379  0.159  -1.334 H17 DRG 55 
1RQ H18 H18 H 0 1 N N N 2.864  27.614 30.224 -3.798 3.467  0.202  H18 DRG 56 
1RQ H19 H19 H 0 1 N N N 1.238  27.807 28.671 -6.071 4.900  -1.116 H19 DRG 57 
1RQ H20 H20 H 0 1 N N N 0.700  24.279 28.608 -7.877 2.554  -0.689 H20 DRG 58 
1RQ H21 H21 H 0 1 N N N 2.062  22.808 30.073 -7.374 0.165  -0.683 H21 DRG 59 
1RQ H22 H22 H 0 1 N N N 6.669  22.872 32.205 -3.535 -3.042 -1.156 H22 DRG 60 
1RQ H23 H23 H 0 1 N N N 8.574  21.671 33.059 -2.792 -5.330 -1.744 H23 DRG 61 
1RQ H24 H24 H 0 1 N N N 10.200 21.255 34.883 -1.195 -7.148 -1.463 H24 DRG 62 
1RQ H25 H25 H 0 1 N N N 10.098 22.558 36.974 0.713  -6.922 0.068  H25 DRG 63 
1RQ H26 H26 H 0 1 N N N 8.348  24.277 37.285 1.056  -4.876 1.344  H26 DRG 64 
1RQ H27 H27 H 0 1 N N N 6.448  25.484 36.441 0.323  -2.593 1.937  H27 DRG 65 
1RQ H28 H28 H 0 1 N N N 4.804  25.865 34.636 -1.251 -0.761 1.666  H28 DRG 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
1RQ OAB CAZ SING N N 1  
1RQ CAG CAZ DOUB Y N 2  
1RQ CAG CAL SING Y N 3  
1RQ CAZ CAN SING Y N 4  
1RQ CAO CAS SING N N 5  
1RQ CAO CAP SING N N 6  
1RQ CAS NBK SING N N 7  
1RQ CAP CBI SING N N 8  
1RQ CAL CBG DOUB Y N 9  
1RQ CAN CBH DOUB Y N 10 
1RQ CBG CBH SING Y N 11 
1RQ CBG NAW SING Y N 12 
1RQ CBH NBL SING Y N 13 
1RQ NBK CAT SING N N 14 
1RQ NBK CAY SING N N 15 
1RQ CBI CAT SING N N 16 
1RQ CBI NAX SING N N 17 
1RQ OAA CAY DOUB N N 18 
1RQ NAW CBD DOUB Y N 19 
1RQ NBL C4  SING N N 20 
1RQ NBL CBD SING Y N 21 
1RQ N3  C4  DOUB Y N 22 
1RQ N3  C2  SING Y N 23 
1RQ NAX C2  SING N N 24 
1RQ CAY CBJ SING N N 25 
1RQ C4  C5  SING Y N 26 
1RQ C2  N1  DOUB Y N 27 
1RQ CBD CBA SING N N 28 
1RQ C5  C6  DOUB Y N 29 
1RQ N1  C6  SING Y N 30 
1RQ CAM CBA DOUB Y N 31 
1RQ CAM CBF SING Y N 32 
1RQ CBA CAH SING Y N 33 
1RQ CBJ CAQ SING N N 34 
1RQ CBJ CAR SING N N 35 
1RQ CAJ CBF DOUB Y N 36 
1RQ CAJ CAD SING Y N 37 
1RQ CBF CBE SING Y N 38 
1RQ CAQ CAR SING N N 39 
1RQ CAH CAK DOUB Y N 40 
1RQ CAD CAC DOUB Y N 41 
1RQ CBE CAK SING Y N 42 
1RQ CBE CAI DOUB Y N 43 
1RQ CAC CAI SING Y N 44 
1RQ C5  H1  SING N N 45 
1RQ C6  H2  SING N N 46 
1RQ CAQ H3  SING N N 47 
1RQ CAQ H4  SING N N 48 
1RQ CAR H5  SING N N 49 
1RQ CAR H6  SING N N 50 
1RQ CBJ H7  SING N N 51 
1RQ CAT H8  SING N N 52 
1RQ CAT H9  SING N N 53 
1RQ CAS H10 SING N N 54 
1RQ CAS H11 SING N N 55 
1RQ CAO H12 SING N N 56 
1RQ CAO H13 SING N N 57 
1RQ CAP H14 SING N N 58 
1RQ CAP H15 SING N N 59 
1RQ CBI H16 SING N N 60 
1RQ NAX H17 SING N N 61 
1RQ CAN H18 SING N N 62 
1RQ OAB H19 SING N N 63 
1RQ CAG H20 SING N N 64 
1RQ CAL H21 SING N N 65 
1RQ CAM H22 SING N N 66 
1RQ CAJ H23 SING N N 67 
1RQ CAD H24 SING N N 68 
1RQ CAC H25 SING N N 69 
1RQ CAI H26 SING N N 70 
1RQ CAK H27 SING N N 71 
1RQ CAH H28 SING N N 72 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
1RQ SMILES           ACDLabs              12.01 "O=C(N6CCCC(Nc5nc(n3c4cc(O)ccc4nc3c2cc1ccccc1cc2)ccn5)C6)C7CC7" 
1RQ InChI            InChI                1.03  
"InChI=1S/C30H28N6O2/c37-24-11-12-25-26(17-24)36(28(33-25)22-10-7-19-4-1-2-5-21(19)16-22)27-13-14-31-30(34-27)32-23-6-3-15-35(18-23)29(38)20-8-9-20/h1-2,4-5,7,10-14,16-17,20,23,37H,3,6,8-9,15,18H2,(H,31,32,34)/t23-/m1/s1" 
1RQ InChIKey         InChI                1.03  GQWKCVUFYCHSLR-HSZRJFAPSA-N 
1RQ SMILES_CANONICAL CACTVS               3.370 "Oc1ccc2nc(n(c3ccnc(N[C@@H]4CCCN(C4)C(=O)C5CC5)n3)c2c1)c6ccc7ccccc7c6" 
1RQ SMILES           CACTVS               3.370 "Oc1ccc2nc(n(c3ccnc(N[CH]4CCCN(C4)C(=O)C5CC5)n3)c2c1)c6ccc7ccccc7c6" 
1RQ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc2cc(ccc2c1)c3nc4ccc(cc4n3c5ccnc(n5)N[C@@H]6CCCN(C6)C(=O)C7CC7)O" 
1RQ SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc2cc(ccc2c1)c3nc4ccc(cc4n3c5ccnc(n5)NC6CCCN(C6)C(=O)C7CC7)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
1RQ "SYSTEMATIC NAME" ACDLabs              12.01 "cyclopropyl[(3R)-3-({4-[6-hydroxy-2-(naphthalen-2-yl)-1H-benzimidazol-1-yl]pyrimidin-2-yl}amino)piperidin-1-yl]methanone" 
1RQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "cyclopropyl-[(3R)-3-[[4-(2-naphthalen-2-yl-6-oxidanyl-benzimidazol-1-yl)pyrimidin-2-yl]amino]piperidin-1-yl]methanone"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
1RQ "Create component" 2013-05-09 RCSB 
1RQ "Initial release"  2014-05-21 RCSB 
# 
