data_SKP
#

_chem_comp.id                                   SKP
_chem_comp.name                                 "5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-4-HYDROXY-3-PHOSPHONOOXY-CYCLOHEX-1-ENECARBOXYLIC ACID"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H16 O14 P2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-SHIKIMATE-3-PHOSPHATE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-08-13
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       422.173
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SKP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1Q36
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SKP  C1   C1   C  0  1  N  N  N  56.139  12.125  27.856  -2.338  -0.025  -1.381  C1   SKP   1  
SKP  C2   C2   C  0  1  N  N  N  54.964  11.368  28.067  -1.539   0.007  -2.427  C2   SKP   2  
SKP  C3   C3   C  0  1  N  N  R  55.056  10.088  28.900  -0.170  -0.605  -2.451  C3   SKP   3  
SKP  C4   C4   C  0  1  N  N  S  56.326  10.067  29.826  -0.015  -1.600  -1.300  C4   SKP   4  
SKP  C5   C5   C  0  1  N  N  R  57.582  10.266  28.968  -0.475  -0.922  -0.003  C5   SKP   5  
SKP  C6   C6   C  0  1  N  N  N  57.460  11.734  28.408  -1.985  -0.688  -0.082  C6   SKP   6  
SKP  C7   C7   C  0  1  N  N  N  56.027  13.388  27.065  -3.651   0.624  -1.493  C7   SKP   7  
SKP  O1   O1   O  0  1  N  N  N  55.041   8.910  27.984   0.812   0.423  -2.315  O1   SKP   8  
SKP  O2   O2   O  0  1  N  N  N  56.360   8.804  30.511   1.354  -1.994  -1.186  O2   SKP   9  
SKP  O3   O3   O  0  1  N  N  N  58.743  10.178  29.805  -0.177  -1.765   1.111  O3   SKP  10  
SKP  O4   O4   O  0  1  N  N  N  55.188  13.431  26.178  -4.500   0.613  -0.445  O4   SKP  11  
SKP  O5   O5   O  0  1  N  N  N  56.780  14.271  27.347  -3.973   1.171  -2.529  O5   SKP  12  
SKP  P1   P1   P  0  1  N  N  N  53.750   7.981  27.800   1.730   0.367  -3.636  P1   SKP  13  
SKP  O6   O6   O  0  1  N  N  N  52.618   8.831  27.178   0.889   0.599  -4.831  O6   SKP  14  
SKP  O7   O7   O  0  1  N  N  N  53.397   7.456  29.245   2.865   1.506  -3.549  O7   SKP  15  
SKP  O8   O8   O  0  1  N  N  N  54.244   6.906  26.812   2.429  -1.078  -3.744  O8   SKP  16  
SKP  C8   C8   C  0  1  N  N  S  59.701   9.121  29.752   0.046  -0.905   2.230  C8   SKP  17  
SKP  C9   C9   C  0  1  N  N  N  59.120   7.685  29.603   0.372  -1.749   3.464  C9   SKP  18  
SKP  C10  C10  C  0  1  N  N  N  60.522   9.209  31.004  -1.192  -0.089   2.493  C10  SKP  19  
SKP  O9   O9   O  0  1  N  N  N  61.292  10.214  30.954  -1.281   1.033   2.055  O9   SKP  20  
SKP  O10  O10  O  0  1  N  N  N  60.413   8.442  31.981  -2.198  -0.609   3.213  O10  SKP  21  
SKP  P2   P2   P  0  1  N  N  N  60.524   9.348  26.931   1.508   0.714   3.327  P2   SKP  22  
SKP  O11  O11  O  0  1  N  N  N  61.753   8.687  26.285   2.211  -0.227   4.225  O11  SKP  23  
SKP  O12  O12  O  0  1  N  N  N  60.482  10.818  26.599   2.461   1.974   3.018  O12  SKP  24  
SKP  O13  O13  O  0  1  N  N  N  59.237   8.595  26.471   0.156   1.225   4.036  O13  SKP  25  
SKP  O14  O14  O  0  1  N  N  N  60.663   9.254  28.594   1.141  -0.031   1.948  O14  SKP  26  
SKP  H2   H2   H  0  1  N  N  N  54.035  11.751  27.611  -1.890   0.504  -3.320  H2   SKP  27  
SKP  H3   H3   H  0  1  N  N  N  54.173  10.047  29.580  -0.022  -1.123  -3.399  H3   SKP  28  
SKP  H4   H4   H  0  1  N  N  N  56.287  10.889  30.577  -0.634  -2.477  -1.488  H4   SKP  29  
SKP  H5   H5   H  0  1  N  N  N  57.671   9.504  28.158   0.037   0.032   0.111  H5   SKP  30  
SKP  H61  1H6  H  0  1  N  N  N  58.252  11.911  27.644  -2.503  -1.645  -0.013  H61  SKP  31  
SKP  H62  2H6  H  0  1  N  N  N  57.768  12.462  29.194  -2.296  -0.051   0.744  H62  SKP  32  
SKP  HO2  HO2  H  0  1  N  N  N  57.127   8.791  31.070   1.597  -2.404  -2.028  HO2  SKP  33  
SKP  HO4  HO4  H  0  1  N  N  N  55.116  14.233  25.675  -5.364   1.040  -0.518  HO4  SKP  34  
SKP  HO7  HO7  H  0  1  N  N  N  52.631   6.904  29.135   3.391   1.439  -4.358  HO7  SKP  35  
SKP  HO8  HO8  H  0  1  N  N  N  53.478   6.354  26.702   2.966  -1.189  -2.947  HO8  SKP  36  
SKP  H91  1H9  H  0  1  N  N  N  59.868   6.859  29.561   1.375  -2.165   3.365  H91  SKP  37  
SKP  H92  2H9  H  0  1  N  N  N  58.382   7.488  30.415   0.324  -1.123   4.355  H92  SKP  38  
SKP  H93  3H9  H  0  1  N  N  N  58.452   7.636  28.711  -0.350  -2.560   3.550  H93  SKP  39  
SKP  H10  H10  H  0  1  N  N  N  60.933   8.497  32.774  -2.994  -0.086   3.382  H10  SKP  40  
SKP  H12  H12  H  0  1  N  N  N  59.722  11.226  26.998   2.657   2.392   3.868  H12  SKP  41  
SKP  H13  H13  H  0  1  N  N  N  58.477   9.003  26.870  -0.104   2.040   3.586  H13  SKP  42  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SKP  C1   C2   DOUB  N  N   1  
SKP  C1   C6   SING  N  N   2  
SKP  C1   C7   SING  N  N   3  
SKP  C2   C3   SING  N  N   4  
SKP  C2   H2   SING  N  N   5  
SKP  C3   C4   SING  N  N   6  
SKP  C3   O1   SING  N  N   7  
SKP  C3   H3   SING  N  N   8  
SKP  C4   C5   SING  N  N   9  
SKP  C4   O2   SING  N  N  10  
SKP  C4   H4   SING  N  N  11  
SKP  C5   C6   SING  N  N  12  
SKP  C5   O3   SING  N  N  13  
SKP  C5   H5   SING  N  N  14  
SKP  C6   H61  SING  N  N  15  
SKP  C6   H62  SING  N  N  16  
SKP  C7   O4   SING  N  N  17  
SKP  C7   O5   DOUB  N  N  18  
SKP  O1   P1   SING  N  N  19  
SKP  O2   HO2  SING  N  N  20  
SKP  O3   C8   SING  N  N  21  
SKP  O4   HO4  SING  N  N  22  
SKP  P1   O6   DOUB  N  N  23  
SKP  P1   O7   SING  N  N  24  
SKP  P1   O8   SING  N  N  25  
SKP  O7   HO7  SING  N  N  26  
SKP  O8   HO8  SING  N  N  27  
SKP  C8   C9   SING  N  N  28  
SKP  C8   C10  SING  N  N  29  
SKP  C8   O14  SING  N  N  30  
SKP  C9   H91  SING  N  N  31  
SKP  C9   H92  SING  N  N  32  
SKP  C9   H93  SING  N  N  33  
SKP  C10  O9   DOUB  N  N  34  
SKP  C10  O10  SING  N  N  35  
SKP  O10  H10  SING  N  N  36  
SKP  P2   O11  DOUB  N  N  37  
SKP  P2   O12  SING  N  N  38  
SKP  P2   O13  SING  N  N  39  
SKP  P2   O14  SING  N  N  40  
SKP  O12  H12  SING  N  N  41  
SKP  O13  H13  SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SKP  SMILES            ACDLabs               10.04  "O=C(O)C(OP(=O)(O)O)(OC1CC(=CC(OP(=O)(O)O)C1O)C(=O)O)C"  
SKP  SMILES_CANONICAL  CACTVS                3.341  "C[C@](O[C@@H]1CC(=C[C@@H](O[P](O)(O)=O)[C@H]1O)C(O)=O)(O[P](O)(O)=O)C(O)=O"  
SKP  SMILES            CACTVS                3.341  "C[C](O[CH]1CC(=C[CH](O[P](O)(O)=O)[CH]1O)C(O)=O)(O[P](O)(O)=O)C(O)=O"  
SKP  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@](C(=O)O)(O[C@@H]1CC(=C[C@H]([C@H]1O)OP(=O)(O)O)C(=O)O)OP(=O)(O)O"  
SKP  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(C(=O)O)(OC1CC(=CC(C1O)OP(=O)(O)O)C(=O)O)OP(=O)(O)O"  
SKP  InChI             InChI                 1.03   "InChI=1S/C10H16O14P2/c1-10(9(14)15,24-26(19,20)21)22-5-2-4(8(12)13)3-6(7(5)11)23-25(16,17)18/h3,5-7,11H,2H2,1H3,(H,12,13)(H,14,15)(H2,16,17,18)(H2,19,20,21)/t5-,6-,7+,10+/m1/s1"  
SKP  InChIKey          InChI                 1.03   QUQKBSPZUVNKIF-JQCUSGDOSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SKP  "SYSTEMATIC NAME"  ACDLabs               10.04  "(3R,4S,5R)-5-[(1S)-1-carboxy-1-(phosphonooxy)ethoxy]-4-hydroxy-3-(phosphonooxy)cyclohex-1-ene-1-carboxylic acid"  
SKP  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(3R,4S,5R)-4-hydroxy-5-[(2S)-1-hydroxy-1-oxo-2-phosphonooxy-propan-2-yl]oxy-3-phosphonooxy-cyclohexene-1-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SKP  "Create component"   2003-08-13  RCSB  
SKP  "Modify descriptor"  2011-06-04  RCSB  
SKP  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     SKP
_pdbx_chem_comp_synonyms.name        "5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-SHIKIMATE-3-PHOSPHATE"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
