data_A1H2P
# 
_chem_comp.id                                    A1H2P 
_chem_comp.name                                  "~{N}-~{tert}-butyl-4-[4-[[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3-methoxy-5-oxidanyl-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-2-yl]methyl]-1,2,3-triazol-1-yl]piperidine-1-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H37 F3 N8 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-01-22 
_chem_comp.pdbx_modified_date                    2025-01-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        622.639 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1H2P 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8RRB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1H2P N1    N1  N 0 1 N N N N N N -28.326 7.831  0.654  -9.119  -1.402 -0.885 N1    A1H2P 1  
A1H2P N3    N2  N 0 1 Y N N N N N -23.591 8.444  -3.582 -4.047  1.741  0.338  N3    A1H2P 2  
A1H2P C4    C1  C 0 1 N N N N N N -24.968 8.143  -3.158 -5.506  1.624  0.383  C4    A1H2P 3  
A1H2P C6    C2  C 0 1 N N N N N N -27.736 6.844  -0.180 -8.751  -0.894 0.308  C6    A1H2P 4  
A1H2P C7    C3  C 0 1 N N N N N N -25.049 6.714  -2.670 -6.005  0.964  -0.905 C7    A1H2P 5  
A1H2P C8    C4  C 0 1 N N N N N N -26.831 8.716  -1.625 -7.440  0.678  1.651  C8    A1H2P 6  
A1H2P C17   C5  C 0 1 Y N N N N N -12.765 8.759  -0.421 7.073   -0.974 0.289  C17   A1H2P 7  
A1H2P C20   C6  C 0 1 Y N N N N N -12.827 8.820  0.963  7.903   -1.922 0.883  C20   A1H2P 8  
A1H2P C21   C7  C 0 1 Y N N N N N -11.665 9.022  1.677  9.211   -2.057 0.457  C21   A1H2P 9  
A1H2P C22   C8  C 0 1 Y N N N N N -10.453 9.152  1.034  9.697   -1.251 -0.561 C22   A1H2P 10 
A1H2P C24   C9  C 0 1 N N N N N N -17.756 11.863 -2.368 1.070   -2.363 -1.037 C24   A1H2P 11 
A1H2P C26   C10 C 0 1 N N N N N N -20.210 6.119  -0.371 1.546   4.149  -0.256 C26   A1H2P 12 
A1H2P C28   C11 C 0 1 Y N N N N N -22.527 8.633  -2.826 -3.163  0.780  0.694  C28   A1H2P 13 
A1H2P C1    C12 C 0 1 N N N N N N -30.495 6.854  1.134  -11.233 -2.424 -0.202 C1    A1H2P 14 
A1H2P C2    C13 C 0 1 N N N N N N -29.252 7.523  1.738  -9.912  -2.632 -0.945 C2    A1H2P 15 
A1H2P C3    C14 C 0 1 N N N N N N -29.623 8.861  2.396  -10.198 -2.985 -2.406 C3    A1H2P 16 
A1H2P CAB   C15 C 0 1 N N N N N N -28.578 6.597  2.755  -9.132  -3.773 -0.288 CAB   A1H2P 17 
A1H2P NAA   N3  N 0 1 N N N N N N -26.870 7.306  -1.201 -7.938  0.180  0.361  NAA   A1H2P 18 
A1H2P CAA   C16 C 0 1 N N N N N N -26.468 6.392  -2.271 -7.534  0.875  -0.868 CAA   A1H2P 19 
A1H2P C9    C17 C 0 1 N N N N N N -25.430 9.085  -2.064 -5.912  0.769  1.586  C9    A1H2P 20 
A1H2P N4    N4  N 0 1 Y N N N N N -23.287 8.545  -4.843 -3.385  2.773  -0.053 N4    A1H2P 21 
A1H2P N2    N5  N 0 1 Y N N N N N -22.005 8.820  -4.910 -2.121  2.548  0.031  N2    A1H2P 22 
A1H2P C11   C18 C 0 1 Y N N N N N -21.474 8.879  -3.667 -1.932  1.308  0.496  C11   A1H2P 23 
A1H2P "C1'" C19 C 0 1 N N N N N N -20.019 9.181  -3.491 -0.610  0.632  0.750  "C1'" A1H2P 24 
A1H2P "C2'" C20 C 0 1 N N R N N N -19.653 9.426  -2.016 0.235   0.668  -0.526 "C2'" A1H2P 25 
A1H2P "C3'" C21 C 0 1 N N R N N N -18.140 9.558  -1.857 1.525   -0.126 -0.306 "C3'" A1H2P 26 
A1H2P "C4'" C22 C 0 1 N N S N N N -17.467 8.219  -2.099 2.340   0.536  0.809  "C4'" A1H2P 27 
A1H2P N6    N6  N 0 1 Y N N N N N -16.015 8.306  -1.874 3.611   -0.173 0.975  N6    A1H2P 28 
A1H2P N7    N7  N 0 1 Y N N N N N -15.246 7.897  -2.850 3.842   -1.114 1.821  N7    A1H2P 29 
A1H2P N8    N8  N 0 1 Y N N N N N -14.007 8.017  -2.449 5.055   -1.528 1.714  N8    A1H2P 30 
A1H2P C16   C23 C 0 1 Y N N N N N -13.995 8.513  -1.202 5.668   -0.826 0.745  C16   A1H2P 31 
A1H2P C18   C24 C 0 1 Y N N N N N -11.551 8.872  -1.073 7.566   -0.162 -0.730 C18   A1H2P 32 
A1H2P C19   C25 C 0 1 Y N N N N N -10.402 9.077  -0.341 8.874   -0.306 -1.154 C19   A1H2P 33 
A1H2P F1    F1  F 0 1 N N N N N N -9.188  9.217  -0.957 9.353   0.481  -2.142 F1    A1H2P 34 
A1H2P F2    F2  F 0 1 N N N N N N -11.718 9.089  3.042  10.017  -2.977 1.033  F2    A1H2P 35 
A1H2P F3    F3  F 0 1 N N N N N N -9.303  9.354  1.756  10.976  -1.385 -0.974 F3    A1H2P 36 
A1H2P C23   C26 C 0 1 Y N N N N N -15.300 8.682  -0.826 4.738   0.047  0.260  C23   A1H2P 37 
A1H2P "O3'" O1  O 0 1 N N N N N N -17.622 10.505 -2.780 1.203   -1.467 0.068  "O3'" A1H2P 38 
A1H2P "O2'" O2  O 0 1 N N N N N N -20.140 8.377  -1.161 0.559   2.022  -0.845 "O2'" A1H2P 39 
A1H2P C25   C27 C 0 1 N N R N N N -19.565 7.084  -1.355 1.280   2.707  0.182  C25   A1H2P 40 
A1H2P OP3   O3  O 0 1 N N N N N N -21.595 5.962  -0.704 0.305   4.847  -0.375 OP3   A1H2P 41 
A1H2P "C5'" C28 C 0 1 N N R N N N -18.059 7.168  -1.167 2.612   1.995  0.430  "C5'" A1H2P 42 
A1H2P "O5'" O4  O 0 1 N N N N N N -17.761 7.509  0.196  3.405   2.039  -0.758 "O5'" A1H2P 43 
A1H2P O6    O5  O 0 1 N N N N N N -27.941 5.649  -0.068 -9.152  -1.405 1.336  O6    A1H2P 44 
A1H2P H10   H1  H 0 1 N N N N N N -28.094 8.790  0.489  -8.863  -0.950 -1.704 H10   A1H2P 45 
A1H2P H19   H2  H 0 1 N N N N N N -25.641 8.255  -4.021 -5.948  2.616  0.477  H19   A1H2P 46 
A1H2P H14   H3  H 0 1 N N N N N N -24.732 6.034  -3.475 -5.696  1.561  -1.763 H14   A1H2P 47 
A1H2P H13   H4  H 0 1 N N N N N N -24.387 6.586  -1.801 -5.584  -0.038 -0.987 H13   A1H2P 48 
A1H2P H16   H5  H 0 1 N N N N N N -27.130 9.358  -0.783 -7.857  1.665  1.847  H16   A1H2P 49 
A1H2P H15   H6  H 0 1 N N N N N N -27.527 8.864  -2.464 -7.734  -0.008 2.445  H15   A1H2P 50 
A1H2P H26   H7  H 0 1 N N N N N N -13.772 8.711  1.474  7.525   -2.550 1.676  H26   A1H2P 51 
A1H2P H29   H8  H 0 1 N N N N N N -17.331 12.524 -3.138 2.008   -2.401 -1.590 H29   A1H2P 52 
A1H2P H30   H9  H 0 1 N N N N N N -18.821 12.100 -2.228 0.825   -3.360 -0.669 H30   A1H2P 53 
A1H2P H28   H10 H 0 1 N N N N N N -17.220 12.013 -1.419 0.274   -2.013 -1.695 H28   A1H2P 54 
A1H2P H32   H11 H 0 1 N N N N N N -19.705 5.143  -0.428 2.172   4.644  0.486  H32   A1H2P 55 
A1H2P H33   H12 H 0 1 N N N N N N -20.120 6.519  0.650  2.056   4.148  -1.219 H33   A1H2P 56 
A1H2P H37   H13 H 0 1 N N N N N N -22.492 8.600  -1.747 -3.393  -0.208 1.062  H37   A1H2P 57 
A1H2P H1    H14 H 0 1 N N N N N N -31.208 6.613  1.936  -11.789 -1.611 -0.670 H1    A1H2P 58 
A1H2P H2    H15 H 0 1 N N N N N N -30.969 7.540  0.417  -11.823 -3.340 -0.246 H2    A1H2P 59 
A1H2P H3    H16 H 0 1 N N N N N N -30.199 5.930  0.616  -11.029 -2.173 0.839  H3    A1H2P 60 
A1H2P H6    H17 H 0 1 N N N N N N -30.324 8.681  3.225  -9.257  -3.133 -2.935 H6    A1H2P 61 
A1H2P H5    H18 H 0 1 N N N N N N -28.714 9.344  2.783  -10.788 -3.900 -2.450 H5    A1H2P 62 
A1H2P H4    H19 H 0 1 N N N N N N -30.097 9.517  1.651  -10.754 -2.172 -2.873 H4    A1H2P 63 
A1H2P H8    H20 H 0 1 N N N N N N -29.283 6.370  3.568  -8.928  -3.522 0.753  H8    A1H2P 64 
A1H2P H9    H21 H 0 1 N N N N N N -28.279 5.663  2.258  -9.722  -4.689 -0.332 H9    A1H2P 65 
A1H2P H7    H22 H 0 1 N N N N N N -27.688 7.093  3.169  -8.191  -3.921 -0.817 H7    A1H2P 66 
A1H2P H11   H23 H 0 1 N N N N N N -27.134 6.519  -3.137 -7.959  1.879  -0.877 H11   A1H2P 67 
A1H2P H12   H24 H 0 1 N N N N N N -26.526 5.354  -1.913 -7.888  0.318  -1.736 H12   A1H2P 68 
A1H2P H18   H25 H 0 1 N N N N N N -24.747 9.010  -1.205 -5.492  -0.231 1.480  H18   A1H2P 69 
A1H2P H17   H26 H 0 1 N N N N N N -25.427 10.117 -2.446 -5.536  1.227  2.501  H17   A1H2P 70 
A1H2P H20   H27 H 0 1 N N N N N N -19.432 8.329  -3.865 -0.083  1.153  1.549  H20   A1H2P 71 
A1H2P H21   H28 H 0 1 N N N N N N -19.771 10.081 -4.072 -0.781  -0.404 1.043  H21   A1H2P 72 
A1H2P H22   H29 H 0 1 N N N N N N -20.110 10.379 -1.711 -0.329  0.226  -1.347 H22   A1H2P 73 
A1H2P H23   H30 H 0 1 N N N N N N -17.923 9.879  -0.828 2.108   -0.135 -1.227 H23   A1H2P 74 
A1H2P H24   H31 H 0 1 N N N N N N -17.656 7.913  -3.138 1.777   0.500  1.742  H24   A1H2P 75 
A1H2P H25   H32 H 0 1 N N N N N N -11.504 8.800  -2.150 6.925   0.573  -1.193 H25   A1H2P 76 
A1H2P H27   H33 H 0 1 N N N N N N -15.667 9.045  0.123  4.874   0.769  -0.531 H27   A1H2P 77 
A1H2P H31   H34 H 0 1 N N N N N N -19.772 6.733  -2.377 0.692   2.708  1.100  H31   A1H2P 78 
A1H2P H34   H35 H 0 1 N N N N N N -22.002 5.360  -0.092 0.397   5.769  -0.650 H34   A1H2P 79 
A1H2P H35   H36 H 0 1 N N N N N N -17.618 6.191  -1.413 3.144   2.489  1.243  H35   A1H2P 80 
A1H2P H36   H37 H 0 1 N N N N N N -18.131 6.853  0.775  3.617   2.934  -1.057 H36   A1H2P 81 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1H2P N2    N4    DOUB Y N 1  
A1H2P N2    C11   SING Y N 2  
A1H2P N4    N3    SING Y N 3  
A1H2P C11   "C1'" SING N N 4  
A1H2P C11   C28   DOUB Y N 5  
A1H2P N3    C4    SING N N 6  
A1H2P N3    C28   SING Y N 7  
A1H2P "C1'" "C2'" SING N N 8  
A1H2P C4    C7    SING N N 9  
A1H2P C4    C9    SING N N 10 
A1H2P N7    N8    DOUB Y N 11 
A1H2P N7    N6    SING Y N 12 
A1H2P "O3'" C24   SING N N 13 
A1H2P "O3'" "C3'" SING N N 14 
A1H2P C7    CAA   SING N N 15 
A1H2P N8    C16   SING Y N 16 
A1H2P CAA   NAA   SING N N 17 
A1H2P "C4'" N6    SING N N 18 
A1H2P "C4'" "C3'" SING N N 19 
A1H2P "C4'" "C5'" SING N N 20 
A1H2P C9    C8    SING N N 21 
A1H2P "C2'" "C3'" SING N N 22 
A1H2P "C2'" "O2'" SING N N 23 
A1H2P N6    C23   SING Y N 24 
A1H2P C8    NAA   SING N N 25 
A1H2P C25   "C5'" SING N N 26 
A1H2P C25   "O2'" SING N N 27 
A1H2P C25   C26   SING N N 28 
A1H2P C16   C23   DOUB Y N 29 
A1H2P C16   C17   SING N N 30 
A1H2P NAA   C6    SING N N 31 
A1H2P "C5'" "O5'" SING N N 32 
A1H2P C18   C17   DOUB Y N 33 
A1H2P C18   C19   SING Y N 34 
A1H2P F1    C19   SING N N 35 
A1H2P OP3   C26   SING N N 36 
A1H2P C17   C20   SING Y N 37 
A1H2P C19   C22   DOUB Y N 38 
A1H2P C6    O6    DOUB N N 39 
A1H2P C6    N1    SING N N 40 
A1H2P N1    C2    SING N N 41 
A1H2P C20   C21   DOUB Y N 42 
A1H2P C22   C21   SING Y N 43 
A1H2P C22   F3    SING N N 44 
A1H2P C1    C2    SING N N 45 
A1H2P C21   F2    SING N N 46 
A1H2P C2    C3    SING N N 47 
A1H2P C2    CAB   SING N N 48 
A1H2P N1    H10   SING N N 49 
A1H2P C4    H19   SING N N 50 
A1H2P C7    H14   SING N N 51 
A1H2P C7    H13   SING N N 52 
A1H2P C8    H16   SING N N 53 
A1H2P C8    H15   SING N N 54 
A1H2P C20   H26   SING N N 55 
A1H2P C24   H29   SING N N 56 
A1H2P C24   H30   SING N N 57 
A1H2P C24   H28   SING N N 58 
A1H2P C26   H32   SING N N 59 
A1H2P C26   H33   SING N N 60 
A1H2P C28   H37   SING N N 61 
A1H2P C1    H1    SING N N 62 
A1H2P C1    H2    SING N N 63 
A1H2P C1    H3    SING N N 64 
A1H2P C3    H6    SING N N 65 
A1H2P C3    H5    SING N N 66 
A1H2P C3    H4    SING N N 67 
A1H2P CAB   H8    SING N N 68 
A1H2P CAB   H9    SING N N 69 
A1H2P CAB   H7    SING N N 70 
A1H2P CAA   H11   SING N N 71 
A1H2P CAA   H12   SING N N 72 
A1H2P C9    H18   SING N N 73 
A1H2P C9    H17   SING N N 74 
A1H2P "C1'" H20   SING N N 75 
A1H2P "C1'" H21   SING N N 76 
A1H2P "C2'" H22   SING N N 77 
A1H2P "C3'" H23   SING N N 78 
A1H2P "C4'" H24   SING N N 79 
A1H2P C18   H25   SING N N 80 
A1H2P C23   H27   SING N N 81 
A1H2P C25   H31   SING N N 82 
A1H2P OP3   H34   SING N N 83 
A1H2P "C5'" H35   SING N N 84 
A1H2P "O5'" H36   SING N N 85 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1H2P InChI            InChI                1.06  "InChI=1S/C28H37F3N8O5/c1-28(2,3)32-27(42)37-7-5-17(6-8-37)38-12-16(33-35-38)11-21-26(43-4)24(25(41)22(14-40)44-21)39-13-20(34-36-39)15-9-18(29)23(31)19(30)10-15/h9-10,12-13,17,21-22,24-26,40-41H,5-8,11,14H2,1-4H3,(H,32,42)/t21-,22-,24+,25+,26+/m1/s1" 
A1H2P InChIKey         InChI                1.06  MZNGHUJSAGCODC-XQNQHWQKSA-N                                                                                                                                                                                                                                 
A1H2P SMILES_CANONICAL CACTVS               3.385 "CO[C@H]1[C@@H](Cc2cn(nn2)C3CCN(CC3)C(=O)NC(C)(C)C)O[C@H](CO)[C@H](O)[C@@H]1n4cc(nn4)c5cc(F)c(F)c(F)c5"                                                                                                                                                     
A1H2P SMILES           CACTVS               3.385 "CO[CH]1[CH](Cc2cn(nn2)C3CCN(CC3)C(=O)NC(C)(C)C)O[CH](CO)[CH](O)[CH]1n4cc(nn4)c5cc(F)c(F)c(F)c5"                                                                                                                                                            
A1H2P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)NC(=O)N1CCC(CC1)n2cc(nn2)C[C@@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)n4cc(nn4)c5cc(c(c(c5)F)F)F)OC"                                                                                                                                                   
A1H2P SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)NC(=O)N1CCC(CC1)n2cc(nn2)CC3C(C(C(C(O3)CO)O)n4cc(nn4)c5cc(c(c(c5)F)F)F)OC"                                                                                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           A1H2P 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-~{tert}-butyl-4-[4-[[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3-methoxy-5-oxidanyl-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-2-yl]methyl]-1,2,3-triazol-1-yl]piperidine-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1H2P "Create component" 2024-01-22 PDBE 
A1H2P "Initial release"  2025-01-29 RCSB 
# 
