data_9JP
# 
_chem_comp.id                                    9JP 
_chem_comp.name                                  "N-(6-cyano-3-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-4-methylnaphthalen-1-yl)-2-fluoro-N-methylacetamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H23 F N4 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-16 
_chem_comp.pdbx_modified_date                    2017-08-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        502.494 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9JP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5VQU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9JP C4  C1  C 0 1 Y N N 847.843 -30.952 145.344 0.802  -2.243 3.282  C4  9JP 1  
9JP N1  N1  N 0 1 N N N 845.751 -33.950 140.699 3.895  0.386  -1.614 N1  9JP 2  
9JP C1  C2  C 0 1 Y N N 848.757 -30.903 142.705 2.287  -3.252 1.171  C1  9JP 3  
9JP C10 C3  C 0 1 N N N 845.240 -36.323 142.132 5.371  2.458  -0.660 C10 9JP 4  
9JP C11 C4  C 0 1 N N N 844.441 -35.130 142.330 6.011  1.348  -1.262 C11 9JP 5  
9JP C12 C5  C 0 1 N N N 844.733 -34.026 141.616 5.258  0.327  -1.725 C12 9JP 6  
9JP C13 C6  C 0 1 Y N N 844.850 -31.035 145.516 -0.550 0.087  1.530  C13 9JP 7  
9JP C14 C7  C 0 1 Y N N 844.184 -31.941 146.342 -1.060 1.366  1.512  C14 9JP 8  
9JP C15 C8  C 0 1 Y N N 843.329 -31.479 147.385 -2.280 1.622  0.863  C15 9JP 9  
9JP C16 C9  C 0 1 Y N N 843.155 -30.070 147.570 -2.974 0.559  0.232  C16 9JP 10 
9JP C17 C10 C 0 1 Y N N 843.850 -29.167 146.701 -2.428 -0.742 0.266  C17 9JP 11 
9JP C18 C11 C 0 1 Y N N 844.673 -29.666 145.692 -1.231 -0.963 0.910  C18 9JP 12 
9JP C19 C12 C 0 1 Y N N 842.641 -32.380 148.247 -2.822 2.917  0.831  C19 9JP 13 
9JP C2  C13 C 0 1 Y N N 847.423 -31.221 142.965 1.830  -1.945 1.129  C2  9JP 14 
9JP C20 C14 C 0 1 Y N N 841.812 -31.913 149.260 -4.026 3.135  0.182  C20 9JP 15 
9JP C21 C15 C 0 1 Y N N 841.646 -30.545 149.440 -4.705 2.071  -0.440 C21 9JP 16 
9JP C22 C16 C 0 1 Y N N 842.297 -29.632 148.618 -4.194 0.813  -0.417 C22 9JP 17 
9JP C23 C17 C 0 1 N N N 841.121 -32.856 150.129 -4.585 4.453  0.145  C23 9JP 18 
9JP C24 C18 C 0 1 N N N 844.373 -33.444 146.141 -0.312 2.487  2.187  C24 9JP 19 
9JP C25 C19 C 0 1 N N N 844.597 -27.031 147.561 -2.850 -2.096 -1.641 C25 9JP 20 
9JP C26 C20 C 0 1 N N N 845.736 -27.742 148.309 -3.574 -3.238 -2.306 C26 9JP 21 
9JP C27 C21 C 0 1 N N N 842.617 -27.169 146.066 -4.074 -2.589 0.407  C27 9JP 22 
9JP C3  C22 C 0 1 Y N N 846.963 -31.239 144.293 1.084  -1.438 2.190  C3  9JP 23 
9JP C5  C23 C 0 1 Y N N 849.174 -30.637 145.069 1.266  -3.545 3.319  C5  9JP 24 
9JP C6  C24 C 0 1 Y N N 849.630 -30.613 143.753 2.007  -4.048 2.266  C6  9JP 25 
9JP C7  C25 C 0 1 N N N 847.140 -31.900 140.622 2.871  -1.749 -1.000 C7  9JP 26 
9JP C8  C26 C 0 1 N N N 846.044 -32.729 139.940 3.078  -0.722 -2.115 C8  9JP 27 
9JP C9  C27 C 0 1 N N N 846.555 -35.049 140.464 3.299  1.449  -1.043 C9  9JP 28 
9JP F1  F1  F 0 1 N N N 846.283 -26.931 149.215 -3.151 -3.349 -3.634 F1  9JP 29 
9JP N2  N2  N 0 1 N N N 846.228 -36.156 141.207 4.026  2.478  -0.570 N2  9JP 30 
9JP N3  N3  N 0 1 N N N 843.729 -27.767 146.811 -3.099 -1.800 -0.350 N3  9JP 31 
9JP N4  N4  N 0 1 N N N 840.573 -33.606 150.819 -5.029 5.498  0.116  N4  9JP 32 
9JP O1  O1  O 0 1 N N N 845.648 -31.563 144.525 0.632  -0.156 2.154  O1  9JP 33 
9JP O2  O2  O 0 1 N N N 846.623 -31.493 141.873 2.105  -1.160 0.053  O2  9JP 34 
9JP O3  O3  O 0 1 N N N 847.494 -35.090 139.667 2.087  1.480  -0.955 O3  9JP 35 
9JP O4  O4  O 0 1 N N N 845.053 -37.378 142.731 6.029  3.391  -0.235 O4  9JP 36 
9JP O5  O5  O 0 1 N N N 844.503 -25.803 147.666 -2.043 -1.443 -2.268 O5  9JP 37 
9JP H1  H1  H 0 1 N N N 847.492 -30.974 146.365 0.224  -1.852 4.106  H1  9JP 38 
9JP H2  H2  H 0 1 N N N 849.115 -30.881 141.686 2.866  -3.648 0.349  H2  9JP 39 
9JP H3  H3  H 0 1 N N N 843.625 -35.126 143.038 7.087  1.318  -1.350 H3  9JP 40 
9JP H4  H4  H 0 1 N N N 844.128 -33.146 141.775 5.728  -0.532 -2.180 H4  9JP 41 
9JP H5  H5  H 0 1 N N N 845.183 -28.977 145.035 -0.814 -1.959 0.935  H5  9JP 42 
9JP H6  H6  H 0 1 N N N 842.766 -33.444 148.111 -2.304 3.736  1.307  H6  9JP 43 
9JP H7  H7  H 0 1 N N N 841.002 -30.186 150.229 -5.643 2.257  -0.941 H7  9JP 44 
9JP H8  H8  H 0 1 N N N 842.149 -28.574 148.777 -4.727 0.006  -0.899 H8  9JP 45 
9JP H9  H9  H 0 1 N N N 845.221 -33.792 146.749 0.374  2.946  1.475  H9  9JP 46 
9JP H10 H10 H 0 1 N N N 843.459 -33.973 146.450 -1.021 3.234  2.542  H10 9JP 47 
9JP H11 H11 H 0 1 N N N 844.574 -33.649 145.079 0.252  2.091  3.031  H11 9JP 48 
9JP H12 H12 H 0 1 N N N 845.335 -28.632 148.816 -3.355 -4.165 -1.776 H12 9JP 49 
9JP H13 H13 H 0 1 N N N 846.507 -28.048 147.586 -4.648 -3.051 -2.281 H13 9JP 50 
9JP H14 H14 H 0 1 N N N 842.615 -26.080 146.220 -5.063 -2.141 0.303  H14 9JP 51 
9JP H15 H15 H 0 1 N N N 842.735 -27.387 144.994 -4.095 -3.608 0.022  H15 9JP 52 
9JP H16 H16 H 0 1 N N N 841.667 -27.592 146.424 -3.791 -2.603 1.460  H16 9JP 53 
9JP H17 H17 H 0 1 N N N 849.852 -30.411 145.878 1.049  -4.170 4.173  H17 9JP 54 
9JP H18 H18 H 0 1 N N N 850.661 -30.369 143.544 2.364  -5.067 2.297  H18 9JP 55 
9JP H19 H19 H 0 1 N N N 848.043 -32.511 140.766 2.339  -2.614 -1.396 H19 9JP 56 
9JP H20 H20 H 0 1 N N N 847.386 -31.020 140.009 3.839  -2.064 -0.612 H20 9JP 57 
9JP H21 H21 H 0 1 N N N 845.129 -32.123 139.868 2.110  -0.341 -2.442 H21 9JP 58 
9JP H22 H22 H 0 1 N N N 846.380 -33.007 138.930 3.585  -1.196 -2.956 H22 9JP 59 
9JP H23 H23 H 0 1 N N N 846.800 -36.960 141.046 3.580  3.236  -0.161 H23 9JP 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9JP O3  C9  DOUB N N 1  
9JP C8  C7  SING N N 2  
9JP C8  N1  SING N N 3  
9JP C9  N1  SING N N 4  
9JP C9  N2  SING N N 5  
9JP C7  O2  SING N N 6  
9JP N1  C12 SING N N 7  
9JP N2  C10 SING N N 8  
9JP C12 C11 DOUB N N 9  
9JP O2  C2  SING N N 10 
9JP C10 C11 SING N N 11 
9JP C10 O4  DOUB N N 12 
9JP C1  C2  DOUB Y N 13 
9JP C1  C6  SING Y N 14 
9JP C2  C3  SING Y N 15 
9JP C6  C5  DOUB Y N 16 
9JP C3  O1  SING N N 17 
9JP C3  C4  DOUB Y N 18 
9JP O1  C13 SING N N 19 
9JP C5  C4  SING Y N 20 
9JP C13 C18 DOUB Y N 21 
9JP C13 C14 SING Y N 22 
9JP C18 C17 SING Y N 23 
9JP C27 N3  SING N N 24 
9JP C24 C14 SING N N 25 
9JP C14 C15 DOUB Y N 26 
9JP C17 N3  SING N N 27 
9JP C17 C16 DOUB Y N 28 
9JP N3  C25 SING N N 29 
9JP C15 C16 SING Y N 30 
9JP C15 C19 SING Y N 31 
9JP C25 O5  DOUB N N 32 
9JP C25 C26 SING N N 33 
9JP C16 C22 SING Y N 34 
9JP C19 C20 DOUB Y N 35 
9JP C26 F1  SING N N 36 
9JP C22 C21 DOUB Y N 37 
9JP C20 C21 SING Y N 38 
9JP C20 C23 SING N N 39 
9JP C23 N4  TRIP N N 40 
9JP C4  H1  SING N N 41 
9JP C1  H2  SING N N 42 
9JP C11 H3  SING N N 43 
9JP C12 H4  SING N N 44 
9JP C18 H5  SING N N 45 
9JP C19 H6  SING N N 46 
9JP C21 H7  SING N N 47 
9JP C22 H8  SING N N 48 
9JP C24 H9  SING N N 49 
9JP C24 H10 SING N N 50 
9JP C24 H11 SING N N 51 
9JP C26 H12 SING N N 52 
9JP C26 H13 SING N N 53 
9JP C27 H14 SING N N 54 
9JP C27 H15 SING N N 55 
9JP C27 H16 SING N N 56 
9JP C5  H17 SING N N 57 
9JP C6  H18 SING N N 58 
9JP C7  H19 SING N N 59 
9JP C7  H20 SING N N 60 
9JP C8  H21 SING N N 61 
9JP C8  H22 SING N N 62 
9JP N2  H23 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9JP SMILES           ACDLabs              12.01 "c1c(c(ccc1)OCCN2C=CC(=O)NC2=O)Oc3cc(c4c(c3C)cc(cc4)C#N)N(C(=O)CF)C"                                                                                                                 
9JP InChI            InChI                1.03  "InChI=1S/C27H23FN4O5/c1-17-20-13-18(16-29)7-8-19(20)21(31(2)26(34)15-28)14-24(17)37-23-6-4-3-5-22(23)36-12-11-32-10-9-25(33)30-27(32)35/h3-10,13-14H,11-12,15H2,1-2H3,(H,30,33,35)" 
9JP InChIKey         InChI                1.03  FGIZVIJZVLIADM-UHFFFAOYSA-N                                                                                                                                                          
9JP SMILES_CANONICAL CACTVS               3.385 "CN(C(=O)CF)c1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c(C)c4cc(ccc14)C#N"                                                                                                                     
9JP SMILES           CACTVS               3.385 "CN(C(=O)CF)c1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c(C)c4cc(ccc14)C#N"                                                                                                                     
9JP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)N(C)C(=O)CF)C#N"                                                                                                                       
9JP SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)N(C)C(=O)CF)C#N"                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9JP "SYSTEMATIC NAME" ACDLabs              12.01 "N-(6-cyano-3-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-4-methylnaphthalen-1-yl)-2-fluoro-N-methylacetamide"          
9JP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[3-[2-[2-[2,4-bis(oxidanylidene)pyrimidin-1-yl]ethoxy]phenoxy]-6-cyano-4-methyl-naphthalen-1-yl]-2-fluoranyl-~{N}-methyl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9JP "Create component" 2017-05-16 RCSB 
9JP "Initial release"  2017-08-23 RCSB 
# 
