data_P0O
# 
_chem_comp.id                                    P0O 
_chem_comp.name                                  "(1R,2S,5S)-3-[(2S)-2-(tert-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-6,6-dimethyl-N-[(2S)-5-oxidanylidene-1-[(3S)-2-oxidanylidenepyrrolidin-3-yl]hex-3-en-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H47 N5 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-28 
_chem_comp.pdbx_modified_date                    2023-10-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        545.714 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     P0O 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8IFR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
P0O N1  N1  N 0 1 N N N -19.648 16.218 -25.595 -0.377 0.640  -0.233 N1  P0O 1  
P0O N3  N2  N 0 1 N N N -16.683 22.300 -24.281 3.908  -3.595 -1.899 N3  P0O 2  
P0O C4  C1  C 0 1 N N S -19.995 16.650 -23.201 -2.649 0.038  0.539  C4  P0O 3  
P0O C5  C2  C 0 1 N N N -19.162 16.778 -24.477 -1.370 -0.271 -0.196 C5  P0O 4  
P0O C6  C3  C 0 1 N N N -20.894 15.443 -25.714 -0.386 2.016  0.316  C6  P0O 5  
P0O C7  C4  C 0 1 N N S -20.837 14.850 -27.109 0.358  2.861  -0.740 C7  P0O 6  
P0O C8  C5  C 0 1 N N S -18.924 16.378 -26.856 0.971  0.490  -0.826 C8  P0O 7  
P0O C10 C6  C 0 1 N N S -17.622 19.705 -28.161 4.174  -0.601 0.965  C10 P0O 8  
P0O C13 C7  C 0 1 N N N -18.653 20.318 -31.765 5.418  3.006  0.913  C13 P0O 9  
P0O C15 C8  C 0 1 N N N -16.541 20.406 -27.328 5.115  -1.712 0.496  C15 P0O 10 
P0O C17 C9  C 0 1 N N N -18.289 21.575 -25.806 5.278  -4.181 -0.020 C17 P0O 11 
P0O C20 C10 C 0 1 N N R -19.661 15.480 -27.834 1.251  1.857  -1.497 C20 P0O 12 
P0O C21 C11 C 0 1 N N N -19.678 13.999 -27.536 0.064  2.591  -2.217 C21 P0O 13 
P0O C22 C12 C 0 1 N N N -18.839 13.361 -26.447 -1.177 1.762  -2.556 C22 P0O 14 
P0O C24 C13 C 0 1 N N N -19.499 14.980 -21.486 -5.017 -0.283 0.060  C24 P0O 15 
P0O C26 C14 C 0 1 N N N -19.930 13.121 -19.044 -7.523 0.876  -1.013 C26 P0O 16 
P0O C28 C15 C 0 1 N N N -17.461 13.332 -18.811 -7.781 -0.402 1.119  C28 P0O 17 
P0O C1  C16 C 0 1 N N N -21.427 18.606 -23.890 -2.154 -1.832 2.120  C1  P0O 18 
P0O C11 C17 C 0 1 N N N -17.376 19.816 -29.665 4.970  0.648  1.244  C11 P0O 19 
P0O C12 C18 C 0 1 N N N -18.317 19.535 -30.558 4.646  1.794  0.643  C12 P0O 20 
P0O C14 C19 C 0 1 N N N -19.879 19.946 -32.553 5.052  4.301  0.234  C14 P0O 21 
P0O C16 C20 C 0 1 N N S -17.058 20.674 -25.901 4.327  -3.013 0.333  C16 P0O 22 
P0O C18 C21 C 0 1 N N N -18.132 22.289 -24.465 5.208  -4.187 -1.564 C18 P0O 23 
P0O C19 C22 C 0 1 N N N -16.052 21.366 -24.995 3.395  -2.921 -0.855 C19 P0O 24 
P0O C2  C23 C 0 1 N N N -20.622 17.983 -22.748 -2.497 -0.345 2.012  C2  P0O 25 
P0O C23 C24 C 0 1 N N N -19.860 13.097 -28.739 0.419  3.686  -3.225 C23 P0O 26 
P0O C25 C25 C 0 1 N N N -18.622 13.325 -19.794 -7.406 -0.503 -0.361 C25 P0O 27 
P0O C27 C26 C 0 1 N N N -18.421 12.222 -20.824 -8.354 -1.480 -1.061 C27 P0O 28 
P0O C29 C27 C 0 1 N N N -21.557 17.738 -21.559 -1.374 0.484  2.641  C29 P0O 29 
P0O C3  C28 C 0 1 N N N -19.541 18.973 -22.304 -3.809 -0.069 2.750  C3  P0O 30 
P0O C9  C29 C 0 1 N N N -18.946 17.839 -27.297 1.990  0.207  0.248  C9  P0O 31 
P0O N2  N3  N 0 1 N N N -17.788 18.316 -27.772 3.184  -0.326 -0.079 N2  P0O 32 
P0O N4  N4  N 0 1 N N N -19.155 16.103 -22.149 -3.749 -0.727 -0.053 N4  P0O 33 
P0O N5  N5  N 0 1 N N N -18.648 14.619 -20.505 -6.029 -0.987 -0.484 N5  P0O 34 
P0O O1  O1  O 0 1 N N N -17.956 21.269 -32.148 6.354  2.969  1.684  O1  P0O 35 
P0O O2  O2  O 0 1 N N N -14.841 21.092 -24.916 2.337  -2.329 -0.864 O2  P0O 36 
P0O O3  O3  O 0 1 N N N -19.951 18.537 -27.151 1.735  0.459  1.407  O3  P0O 37 
P0O O4  O4  O 0 1 N N N -18.078 17.362 -24.487 -1.234 -1.339 -0.753 O4  P0O 38 
P0O O5  O5  O 0 1 N N N -20.551 14.375 -21.762 -5.247 0.753  0.654  O5  P0O 39 
P0O H1  H1  H 0 1 N N N -16.211 22.944 -23.679 3.477  -3.675 -2.764 H1  P0O 40 
P0O H2  H2  H 0 1 N N N -20.815 15.946 -23.403 -2.865 1.104  0.461  H2  P0O 41 
P0O H3  H3  H 0 1 N N N -21.771 16.097 -25.605 -1.409 2.371  0.436  H3  P0O 42 
P0O H4  H4  H 0 1 N N N -20.932 14.648 -24.954 0.141  2.047  1.270  H4  P0O 43 
P0O H5  H5  H 0 1 N N N -21.783 14.750 -27.661 0.726  3.841  -0.436 H5  P0O 44 
P0O H6  H6  H 0 1 N N N -17.883 16.038 -26.750 0.973  -0.307 -1.570 H6  P0O 45 
P0O H7  H7  H 0 1 N N N -18.569 20.226 -27.954 3.664  -0.917 1.875  H7  P0O 46 
P0O H8  H8  H 0 1 N N N -15.649 19.764 -27.277 5.558  -1.433 -0.460 H8  P0O 47 
P0O H9  H9  H 0 1 N N N -16.278 21.362 -27.805 5.904  -1.855 1.234  H9  P0O 48 
P0O H10 H10 H 0 1 N N N -18.306 22.300 -26.633 6.292  -3.975 0.324  H10 P0O 49 
P0O H11 H11 H 0 1 N N N -19.212 20.977 -25.823 4.913  -5.123 0.390  H11 P0O 50 
P0O H12 H12 H 0 1 N N N -19.794 15.819 -28.872 2.278  2.092  -1.778 H12 P0O 51 
P0O H13 H13 H 0 1 N N N -18.741 14.059 -25.602 -1.603 1.355  -1.639 H13 P0O 52 
P0O H14 H14 H 0 1 N N N -19.326 12.436 -26.104 -1.914 2.396  -3.049 H14 P0O 53 
P0O H15 H15 H 0 1 N N N -17.841 13.124 -26.844 -0.897 0.945  -3.221 H15 P0O 54 
P0O H16 H16 H 0 1 N N N -20.059 13.926 -18.305 -6.848 1.572  -0.514 H16 P0O 55 
P0O H17 H17 H 0 1 N N N -20.768 13.140 -19.756 -7.256 0.804  -2.067 H17 P0O 56 
P0O H18 H18 H 0 1 N N N -19.909 12.150 -18.528 -8.548 1.235  -0.921 H18 P0O 57 
P0O H19 H19 H 0 1 N N N -17.612 14.131 -18.070 -8.806 -0.043 1.210  H19 P0O 58 
P0O H20 H20 H 0 1 N N N -17.410 12.361 -18.298 -7.698 -1.385 1.583  H20 P0O 59 
P0O H21 H21 H 0 1 N N N -16.521 13.510 -19.355 -7.106 0.294  1.617  H21 P0O 60 
P0O H22 H22 H 0 1 N N N -21.868 19.556 -23.553 -1.219 -2.029 1.595  H22 P0O 61 
P0O H23 H23 H 0 1 N N N -20.763 18.794 -24.747 -2.045 -2.105 3.170  H23 P0O 62 
P0O H24 H24 H 0 1 N N N -22.229 17.916 -24.192 -2.954 -2.422 1.672  H24 P0O 63 
P0O H25 H25 H 0 1 N N N -16.404 20.134 -30.013 5.803  0.615  1.931  H25 P0O 64 
P0O H27 H27 H 0 1 N N N -18.897 18.641 -30.384 3.812  1.827  -0.044 H27 P0O 65 
P0O H29 H29 H 0 1 N N N -19.981 20.623 -33.414 4.332  4.842  0.848  H29 P0O 66 
P0O H30 H30 H 0 1 N N N -19.785 18.910 -32.910 5.947  4.908  0.103  H30 P0O 67 
P0O H31 H31 H 0 1 N N N -20.768 20.033 -31.911 4.612  4.088  -0.740 H31 P0O 68 
P0O H32 H32 H 0 1 N N N -17.313 19.704 -25.449 3.769  -3.237 1.242  H32 P0O 69 
P0O H33 H33 H 0 1 N N N -18.535 23.312 -24.509 5.266  -5.209 -1.940 H33 P0O 70 
P0O H34 H34 H 0 1 N N N -18.631 21.733 -23.658 6.016  -3.586 -1.980 H34 P0O 71 
P0O H35 H35 H 0 1 N N N -19.858 12.046 -28.414 1.023  3.260  -4.026 H35 P0O 72 
P0O H36 H36 H 0 1 N N N -20.818 13.327 -29.228 -0.496 4.106  -3.643 H36 P0O 73 
P0O H37 H37 H 0 1 N N N -19.036 13.262 -29.449 0.984  4.472  -2.723 H37 P0O 74 
P0O H38 H38 H 0 1 N N N -18.398 11.246 -20.317 -8.087 -1.552 -2.116 H38 P0O 75 
P0O H39 H39 H 0 1 N N N -19.250 12.240 -21.547 -8.271 -2.463 -0.597 H39 P0O 76 
P0O H40 H40 H 0 1 N N N -17.470 12.383 -21.352 -9.379 -1.120 -0.970 H40 P0O 77 
P0O H41 H41 H 0 1 N N N -20.988 17.290 -20.731 -1.636 1.541  2.599  H41 P0O 78 
P0O H42 H42 H 0 1 N N N -21.991 18.694 -21.231 -1.240 0.184  3.680  H42 P0O 79 
P0O H43 H43 H 0 1 N N N -22.364 17.054 -21.862 -0.448 0.316  2.092  H43 P0O 80 
P0O H44 H44 H 0 1 N N N -18.956 18.534 -21.482 -4.608 -0.659 2.302  H44 P0O 81 
P0O H45 H45 H 0 1 N N N -18.875 19.193 -23.151 -3.700 -0.342 3.799  H45 P0O 82 
P0O H46 H46 H 0 1 N N N -20.016 19.904 -21.960 -4.052 0.991  2.673  H46 P0O 83 
P0O H47 H47 H 0 1 N N N -17.010 17.694 -27.862 3.388  -0.527 -1.005 H47 P0O 84 
P0O H48 H48 H 0 1 N N N -18.303 16.570 -21.911 -3.566 -1.554 -0.526 H48 P0O 85 
P0O H49 H49 H 0 1 N N N -17.965 15.296 -20.231 -5.845 -1.813 -0.958 H49 P0O 86 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
P0O C14 C13 SING N N 1  
P0O O1  C13 DOUB N N 2  
P0O C13 C12 SING N N 3  
P0O C12 C11 DOUB N E 4  
P0O C11 C10 SING N N 5  
P0O C23 C21 SING N N 6  
P0O C10 N2  SING N N 7  
P0O C10 C15 SING N N 8  
P0O C20 C21 SING N N 9  
P0O C20 C7  SING N N 10 
P0O C20 C8  SING N N 11 
P0O N2  C9  SING N N 12 
P0O C21 C7  SING N N 13 
P0O C21 C22 SING N N 14 
P0O C15 C16 SING N N 15 
P0O C9  O3  DOUB N N 16 
P0O C9  C8  SING N N 17 
P0O C7  C6  SING N N 18 
P0O C8  N1  SING N N 19 
P0O C16 C17 SING N N 20 
P0O C16 C19 SING N N 21 
P0O C17 C18 SING N N 22 
P0O C6  N1  SING N N 23 
P0O N1  C5  SING N N 24 
P0O C19 O2  DOUB N N 25 
P0O C19 N3  SING N N 26 
P0O O4  C5  DOUB N N 27 
P0O C5  C4  SING N N 28 
P0O C18 N3  SING N N 29 
P0O C1  C2  SING N N 30 
P0O C4  C2  SING N N 31 
P0O C4  N4  SING N N 32 
P0O C2  C3  SING N N 33 
P0O C2  C29 SING N N 34 
P0O N4  C24 SING N N 35 
P0O O5  C24 DOUB N N 36 
P0O C24 N5  SING N N 37 
P0O C27 C25 SING N N 38 
P0O N5  C25 SING N N 39 
P0O C25 C26 SING N N 40 
P0O C25 C28 SING N N 41 
P0O N3  H1  SING N N 42 
P0O C4  H2  SING N N 43 
P0O C6  H3  SING N N 44 
P0O C6  H4  SING N N 45 
P0O C7  H5  SING N N 46 
P0O C8  H6  SING N N 47 
P0O C10 H7  SING N N 48 
P0O C15 H8  SING N N 49 
P0O C15 H9  SING N N 50 
P0O C17 H10 SING N N 51 
P0O C17 H11 SING N N 52 
P0O C20 H12 SING N N 53 
P0O C22 H13 SING N N 54 
P0O C22 H14 SING N N 55 
P0O C22 H15 SING N N 56 
P0O C26 H16 SING N N 57 
P0O C26 H17 SING N N 58 
P0O C26 H18 SING N N 59 
P0O C28 H19 SING N N 60 
P0O C28 H20 SING N N 61 
P0O C28 H21 SING N N 62 
P0O C1  H22 SING N N 63 
P0O C1  H23 SING N N 64 
P0O C1  H24 SING N N 65 
P0O C11 H25 SING N N 66 
P0O C12 H27 SING N N 67 
P0O C14 H29 SING N N 68 
P0O C14 H30 SING N N 69 
P0O C14 H31 SING N N 70 
P0O C16 H32 SING N N 71 
P0O C18 H33 SING N N 72 
P0O C18 H34 SING N N 73 
P0O C23 H35 SING N N 74 
P0O C23 H36 SING N N 75 
P0O C23 H37 SING N N 76 
P0O C27 H38 SING N N 77 
P0O C27 H39 SING N N 78 
P0O C27 H40 SING N N 79 
P0O C29 H41 SING N N 80 
P0O C29 H42 SING N N 81 
P0O C29 H43 SING N N 82 
P0O C3  H44 SING N N 83 
P0O C3  H45 SING N N 84 
P0O C3  H46 SING N N 85 
P0O N2  H47 SING N N 86 
P0O N4  H48 SING N N 87 
P0O N5  H49 SING N N 88 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
P0O InChI            InChI                1.06  "InChI=1S/C29H47N5O5/c1-16(35)10-11-18(14-17-12-13-30-23(17)36)31-24(37)21-20-19(29(20,8)9)15-34(21)25(38)22(27(2,3)4)32-26(39)33-28(5,6)7/h10-11,17-22H,12-15H2,1-9H3,(H,30,36)(H,31,37)(H2,32,33,39)/b11-10+/t17-,18+,19-,20-,21-,22+/m0/s1" 
P0O InChIKey         InChI                1.06  BKLMFWOPPAUWNX-NWKMKTNDSA-N                                                                                                                                                                                                                    
P0O SMILES_CANONICAL CACTVS               3.385 "CC(=O)\C=C\[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2[C@@H]3[C@H](CN2C(=O)[C@@H](NC(=O)NC(C)(C)C)C(C)(C)C)C3(C)C"                                                                                                                                    
P0O SMILES           CACTVS               3.385 "CC(=O)C=C[CH](C[CH]1CCNC1=O)NC(=O)[CH]2[CH]3[CH](CN2C(=O)[CH](NC(=O)NC(C)(C)C)C(C)(C)C)C3(C)C"                                                                                                                                                
P0O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)C=C[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2[C@@H]3[C@@H](C3(C)C)CN2C(=O)[C@H](C(C)(C)C)NC(=O)NC(C)(C)C"                                                                                                                                      
P0O SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)C=CC(CC1CCNC1=O)NC(=O)C2C3C(C3(C)C)CN2C(=O)C(C(C)(C)C)NC(=O)NC(C)(C)C"                                                                                                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           P0O 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(1~{R},2~{S},5~{S})-3-[(2~{S})-2-(~{tert}-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-6,6-dimethyl-~{N}-[(2~{S})-5-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]hex-3-en-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
P0O "Create component" 2023-02-28 PDBJ 
P0O "Initial release"  2023-10-18 RCSB 
# 
