data_LAO
# 
_chem_comp.id                                    LAO 
_chem_comp.name                                  2-O-phosphono-alpha-L-arabinopyranose 
_chem_comp.type                                  "L-saccharide, alpha linking" 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C5 H11 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ARA 
_chem_comp.pdbx_synonyms                         "2-O-phosphono-alpha-L-arabinose; 2-O-phosphono-L-arabinose; 2-O-phosphono-arabinose" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-02-27 
_chem_comp.pdbx_modified_date                    2023-01-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        230.110 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LAO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4OUX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 LAO 2-O-phosphono-alpha-L-arabinose PDB ? 
2 LAO 2-O-phosphono-L-arabinose       PDB ? 
3 LAO 2-O-phosphono-arabinose         PDB ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LAO OP2 OP2 O 0 1 N N N -15.745 -27.103 21.213 2.289  -1.518 0.723  OP2 LAO 1  
LAO P   P   P 0 1 N N N -16.903 -26.819 20.189 2.245  -0.041 0.085  P   LAO 2  
LAO OP1 OP1 O 0 1 N N N -18.017 -27.836 20.324 2.300  0.966  1.168  OP1 LAO 3  
LAO OP3 OP3 O 0 1 N Y N -17.421 -25.448 20.471 3.506  0.157  -0.896 OP3 LAO 4  
LAO O2  O2  O 0 1 N N N -16.308 -26.833 18.699 0.881  0.142  -0.750 O2  LAO 5  
LAO C2  C2  C 0 1 N N R -16.083 -28.011 17.876 -0.412 0.129  -0.141 C2  LAO 6  
LAO C3  C3  C 0 1 N N S -14.658 -28.290 17.833 -1.246 -1.009 -0.737 C3  LAO 7  
LAO O3  O3  O 0 1 N N N -14.145 -28.697 19.164 -0.634 -2.263 -0.429 O3  LAO 8  
LAO C4  C4  C 0 1 N N S -14.207 -29.227 16.861 -2.654 -0.965 -0.134 C4  LAO 9  
LAO O4  O4  O 0 1 N N N -14.591 -30.555 17.269 -2.577 -1.188 1.275  O4  LAO 10 
LAO C5  C5  C 0 1 N N N -14.783 -29.008 15.477 -3.272 0.410  -0.401 C5  LAO 11 
LAO O5  O5  O 0 1 N N N -16.167 -28.670 15.492 -2.431 1.425  0.152  O5  LAO 12 
LAO C1  C1  C 0 1 N N R -16.600 -27.746 16.472 -1.116 1.462  -0.407 C1  LAO 13 
LAO O1  O1  O 0 1 N Y N -17.976 -27.620 16.425 -0.373 2.524  0.196  O1  LAO 14 
LAO H1A H1  H 0 1 N N N -15.961 -27.869 21.732 2.257  -2.230 0.070  H1A LAO 15 
LAO H2A H2  H 0 1 N N N -18.347 -25.495 20.678 4.364  0.061  -0.460 H2A LAO 16 
LAO H2  H3  H 0 1 N N N -16.621 -28.872 18.299 -0.307 -0.020 0.933  H2  LAO 17 
LAO H3  H4  H 0 1 N N N -14.165 -27.335 17.600 -1.308 -0.889 -1.819 H3  LAO 18 
LAO HO3 H5  H 0 1 N Y N -14.441 -28.078 19.821 -1.110 -3.029 -0.777 HO3 LAO 19 
LAO H4  H6  H 0 1 N N N -13.111 -29.176 16.787 -3.271 -1.738 -0.592 H4  LAO 20 
LAO HO4 H7  H 0 1 N Y N -14.247 -30.732 18.137 -3.434 -1.174 1.723  HO4 LAO 21 
LAO H51 H8  H 0 1 N N N -14.655 -29.933 14.895 -3.367 0.563  -1.476 H51 LAO 22 
LAO H52 H9  H 0 1 N N N -14.229 -28.190 14.993 -4.257 0.463  0.062  H52 LAO 23 
LAO H1  H10 H 0 1 N N N -16.180 -26.770 16.187 -1.182 1.629  -1.482 H1  LAO 24 
LAO HO1 H11 H 0 1 N Y N -18.260 -26.999 17.085 -0.762 3.399  0.067  HO1 LAO 25 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LAO C5  O5  SING N N 1  
LAO C5  C4  SING N N 2  
LAO O5  C1  SING N N 3  
LAO O1  C1  SING N N 4  
LAO C1  C2  SING N N 5  
LAO C4  O4  SING N N 6  
LAO C4  C3  SING N N 7  
LAO C3  C2  SING N N 8  
LAO C3  O3  SING N N 9  
LAO C2  O2  SING N N 10 
LAO O2  P   SING N N 11 
LAO P   OP1 DOUB N N 12 
LAO P   OP3 SING N N 13 
LAO P   OP2 SING N N 14 
LAO OP2 H1A SING N N 15 
LAO OP3 H2A SING N N 16 
LAO C2  H2  SING N N 17 
LAO C3  H3  SING N N 18 
LAO O3  HO3 SING N N 19 
LAO C4  H4  SING N N 20 
LAO O4  HO4 SING N N 21 
LAO C5  H51 SING N N 22 
LAO C5  H52 SING N N 23 
LAO C1  H1  SING N N 24 
LAO O1  HO1 SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LAO SMILES           ACDLabs              12.01 "O=P(OC1C(O)C(O)COC1O)(O)O"                                                                       
LAO InChI            InChI                1.03  "InChI=1S/C5H11O8P/c6-2-1-12-5(8)4(3(2)7)13-14(9,10)11/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4+,5+/m0/s1" 
LAO InChIKey         InChI                1.03  QIAIUTJEZJIPSH-QMKXCQHVSA-N                                                                       
LAO SMILES_CANONICAL CACTVS               3.385 "O[C@H]1CO[C@@H](O)[C@H](O[P](O)(O)=O)[C@H]1O"                                                    
LAO SMILES           CACTVS               3.385 "O[CH]1CO[CH](O)[CH](O[P](O)(O)=O)[CH]1O"                                                         
LAO SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1[C@@H]([C@@H]([C@H]([C@@H](O1)O)OP(=O)(O)O)O)O"                                                
LAO SMILES           "OpenEye OEToolkits" 1.7.6 "C1C(C(C(C(O1)O)OP(=O)(O)O)O)O"                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
LAO "SYSTEMATIC NAME" ACDLabs              12.01 2-O-phosphono-alpha-L-arabinopyranose                                
LAO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3R,4S,5S)-2,4,5-tris(oxidanyl)oxan-3-yl] dihydrogen phosphate" 
# 
_pdbx_chem_comp_related.comp_id             LAO 
_pdbx_chem_comp_related.related_comp_id     ARA 
_pdbx_chem_comp_related.relationship_type   "Carbohydrate core" 
_pdbx_chem_comp_related.details             ? 
# 
loop_
_pdbx_chem_comp_atom_related.ordinal 
_pdbx_chem_comp_atom_related.comp_id 
_pdbx_chem_comp_atom_related.atom_id 
_pdbx_chem_comp_atom_related.related_comp_id 
_pdbx_chem_comp_atom_related.related_atom_id 
_pdbx_chem_comp_atom_related.related_type 
1  LAO C1  ARA C1  "Carbohydrate core" 
2  LAO C2  ARA C2  "Carbohydrate core" 
3  LAO C3  ARA C3  "Carbohydrate core" 
4  LAO C4  ARA C4  "Carbohydrate core" 
5  LAO C5  ARA C5  "Carbohydrate core" 
6  LAO O1  ARA O1  "Carbohydrate core" 
7  LAO O2  ARA O2  "Carbohydrate core" 
8  LAO O3  ARA O3  "Carbohydrate core" 
9  LAO O4  ARA O4  "Carbohydrate core" 
10 LAO O5  ARA O5  "Carbohydrate core" 
11 LAO H1  ARA H1  "Carbohydrate core" 
12 LAO HO1 ARA HO1 "Carbohydrate core" 
13 LAO H2  ARA H2  "Carbohydrate core" 
14 LAO H3  ARA H3  "Carbohydrate core" 
15 LAO HO3 ARA HO3 "Carbohydrate core" 
16 LAO H4  ARA H4  "Carbohydrate core" 
17 LAO HO4 ARA HO4 "Carbohydrate core" 
18 LAO H51 ARA H51 "Carbohydrate core" 
19 LAO H52 ARA H52 "Carbohydrate core" 
# 
loop_
_pdbx_chem_comp_feature.comp_id 
_pdbx_chem_comp_feature.type 
_pdbx_chem_comp_feature.value 
_pdbx_chem_comp_feature.source 
_pdbx_chem_comp_feature.support 
LAO "CARBOHYDRATE ISOMER"                 L        PDB ? 
LAO "CARBOHYDRATE RING"                   pyranose PDB ? 
LAO "CARBOHYDRATE ANOMER"                 alpha    PDB ? 
LAO "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose   PDB ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LAO "Create component"         2014-02-27 PDBJ 
LAO "Initial release"          2015-08-19 RCSB 
LAO "Other modification"       2020-07-03 RCSB 
LAO "Modify parent residue"    2020-07-17 RCSB 
LAO "Modify synonyms"          2020-07-17 RCSB 
LAO "Modify linking type"      2020-07-17 RCSB 
LAO "Modify atom id"           2020-07-17 RCSB 
LAO "Modify component atom id" 2020-07-17 RCSB 
LAO "Modify leaving atom flag" 2020-07-17 RCSB 
LAO "Modify leaving atom flag" 2023-01-10 PDBE 
# 
