data_GPO
#

_chem_comp.id                                   GPO
_chem_comp.name                                 4-O-phosphono-D-glycero-beta-D-manno-heptopyranose
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H15 O10 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;4-O-phosphono-D-glycero-beta-D-manno-heptose; 4-O-phosphono-D-glycero-D-manno-heptose;
4-O-phosphono-D-glycero-manno-heptose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-03-28
_chem_comp.pdbx_modified_date                   2020-08-11
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     GPH
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       290.162
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GPO
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2FCP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  GPO  4-O-phosphono-D-glycero-beta-D-manno-heptose  PDB  ?  
2  GPO  4-O-phosphono-D-glycero-D-manno-heptose       PDB  ?  
3  GPO  4-O-phosphono-D-glycero-manno-heptose         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GPO  O1    OXT   O  0  1  N  Y  N  58.168  59.784  57.267  -4.214  -0.815  -0.094  O1    GPO   1  
GPO  C1    C1    C  0  1  N  N  R  58.213  58.857  56.193  -2.911  -0.703   0.481  C1    GPO   2  
GPO  C2    C2    C  0  1  N  N  S  57.159  57.755  56.363  -2.085  -1.941   0.121  C2    GPO   3  
GPO  C3    C3    C  0  1  N  N  R  56.732  57.132  54.999  -0.672  -1.785   0.690  C3    GPO   4  
GPO  C4    C4    C  0  1  N  N  S  57.827  57.185  53.887  -0.053  -0.495   0.145  C4    GPO   5  
GPO  C5    C5    C  0  1  N  N  R  58.600  58.499  53.885  -0.957   0.687   0.504  C5    GPO   6  
GPO  C6    C6    C  0  1  N  N  R  58.587  59.187  52.533  -0.376   1.973  -0.089  C6    GPO   7  
GPO  C7    C7    C  0  1  N  N  N  59.891  59.997  52.386  -1.352   3.128   0.145  C7    GPO   8  
GPO  O2    O2    O  0  1  N  N  N  56.013  58.305  56.998  -2.016  -2.072  -1.300  O2    GPO   9  
GPO  O3    O3    O  0  1  N  N  N  55.547  57.798  54.525   0.127  -2.903   0.298  O3    GPO  10  
GPO  O4    O4    O  0  1  N  N  N  58.772  56.083  54.014   1.239  -0.302   0.726  O4    GPO  11  
GPO  O5    O5    O  0  1  N  N  N  58.100  59.401  54.903  -2.264   0.465  -0.029  O5    GPO  12  
GPO  O6    O6    O  0  1  N  N  N  58.386  58.272  51.444   0.871   2.267   0.543  O6    GPO  13  
GPO  O7    O7    O  0  1  N  N  N  61.049  59.168  52.403  -0.865   4.302  -0.509  O7    GPO  14  
GPO  P     P     P  0  1  N  N  N  58.178  54.772  53.604   2.605  -0.401  -0.121  P     GPO  15  
GPO  O2A   O2A   O  0  1  N  N  N  59.137  54.275  52.594   2.676  -1.719  -0.789  O2A   GPO  16  
GPO  O3A   O3A   O  0  1  N  N  N  58.163  54.019  54.875   2.635   0.766  -1.230  O3A   GPO  17  
GPO  O4A   O4A   O  0  1  N  N  N  56.834  55.111  53.062   3.863  -0.233   0.869  O4A   GPO  18  
GPO  HO1   HOXT  H  0  1  N  Y  N  58.158  59.313  58.092  -4.793  -0.064   0.094  HO1   GPO  19  
GPO  H1    H1    H  0  1  N  N  N  59.231  58.446  56.258  -2.997  -0.627   1.565  H1    GPO  20  
GPO  H2    H2    H  0  1  N  N  N  57.605  56.956  56.973  -2.555  -2.828   0.546  H2    GPO  21  
GPO  H3    H3    H  0  1  N  N  N  56.551  56.065  55.197  -0.720  -1.735   1.778  H3    GPO  22  
GPO  H4    H4    H  0  1  N  N  N  57.284  57.099  52.934   0.042  -0.566  -0.939  H4    GPO  23  
GPO  H5    H5    H  0  1  N  N  N  59.644  58.239  54.112  -1.018   0.782   1.588  H5    GPO  24  
GPO  H6    H6    H  0  1  N  N  N  57.725  59.869  52.487  -0.219   1.840  -1.159  H6    GPO  25  
GPO  H71   H7    H  0  1  N  N  N  59.861  60.536  51.428  -2.329   2.866  -0.260  H71   GPO  26  
GPO  H72   H7A   H  0  1  N  N  N  59.958  60.687  53.240  -1.440   3.318   1.214  H72   GPO  27  
GPO  HO2   HO2   H  0  1  N  Y  N  56.191  58.428  57.923  -2.878  -2.169  -1.728  HO2   GPO  28  
GPO  HO3   HO3   H  0  1  N  Y  N  54.953  57.945  55.252  -0.211  -3.756   0.606  HO3   GPO  29  
GPO  HO6   HO6   H  0  1  N  Y  N  58.342  58.756  50.628   0.807   2.398   1.499  HO6   GPO  30  
GPO  HO7   HO7   H  0  1  N  Y  N  61.320  58.983  51.511  -1.435   5.076  -0.403  HO7   GPO  31  
GPO  HO3A  HO3A  H  0  0  N  N  N  58.160  53.087  54.691   2.563   1.658  -0.864  HO3A  GPO  32  
GPO  HO4A  HO4A  H  0  0  N  N  N  56.213  55.183  53.777   4.721  -0.282   0.426  HO4A  GPO  33  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GPO  C1   O1    SING  N  N   1  
GPO  O1   HO1   SING  N  N   2  
GPO  O5   C1    SING  N  N   3  
GPO  C1   C2    SING  N  N   4  
GPO  C1   H1    SING  N  N   5  
GPO  C3   C2    SING  N  N   6  
GPO  C2   O2    SING  N  N   7  
GPO  C2   H2    SING  N  N   8  
GPO  C4   C3    SING  N  N   9  
GPO  O3   C3    SING  N  N  10  
GPO  C3   H3    SING  N  N  11  
GPO  C5   C4    SING  N  N  12  
GPO  C4   O4    SING  N  N  13  
GPO  C4   H4    SING  N  N  14  
GPO  C6   C5    SING  N  N  15  
GPO  C5   O5    SING  N  N  16  
GPO  C5   H5    SING  N  N  17  
GPO  O6   C6    SING  N  N  18  
GPO  C7   C6    SING  N  N  19  
GPO  C6   H6    SING  N  N  20  
GPO  C7   O7    SING  N  N  21  
GPO  C7   H71   SING  N  N  22  
GPO  C7   H72   SING  N  N  23  
GPO  O2   HO2   SING  N  N  24  
GPO  O3   HO3   SING  N  N  25  
GPO  P    O4    SING  N  N  26  
GPO  O6   HO6   SING  N  N  27  
GPO  O7   HO7   SING  N  N  28  
GPO  O2A  P     DOUB  N  N  29  
GPO  O4A  P     SING  N  N  30  
GPO  P    O3A   SING  N  N  31  
GPO  O3A  HO3A  SING  N  N  32  
GPO  O4A  HO4A  SING  N  N  33  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GPO  SMILES            ACDLabs               10.04  "O=P(O)(O)OC1C(OC(O)C(O)C1O)C(O)CO"  
GPO  SMILES_CANONICAL  CACTVS                3.341  "OC[C@@H](O)[C@H]1O[C@@H](O)[C@@H](O)[C@@H](O)[C@@H]1O[P](O)(O)=O"  
GPO  SMILES            CACTVS                3.341  "OC[CH](O)[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O[P](O)(O)=O"  
GPO  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@H]([C@@H]1[C@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)OP(=O)(O)O)O)O"  
GPO  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C(C1C(C(C(C(O1)O)O)O)OP(=O)(O)O)O)O"  
GPO  InChI             InChI                 1.03   "InChI=1S/C7H15O10P/c8-1-2(9)5-6(17-18(13,14)15)3(10)4(11)7(12)16-5/h2-12H,1H2,(H2,13,14,15)/t2-,3-,4+,5-,6+,7-/m1/s1"  
GPO  InChIKey          InChI                 1.03   JDFMKMOMBHLESC-XQCVOTFFSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GPO  "SYSTEMATIC NAME"  ACDLabs               10.04  4-O-phosphono-D-glycero-beta-D-manno-heptopyranose  
GPO  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "[(2R,3S,4R,5S,6R)-2-[(1R)-1,2-dihydroxyethyl]-4,5,6-trihydroxy-oxan-3-yl] dihydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
GPO  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
GPO  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
GPO  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
GPO  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GPO  "Create component"          2008-03-28  RCSB  
GPO  "Modify descriptor"         2011-06-04  RCSB  
GPO  "Other modification"        2020-07-03  RCSB  
GPO  "Modify synonyms"           2020-07-17  RCSB  
GPO  "Modify internal type"      2020-07-17  RCSB  
GPO  "Modify linking type"       2020-07-17  RCSB  
GPO  "Modify atom id"            2020-07-17  RCSB  
GPO  "Modify component atom id"  2020-07-17  RCSB  
GPO  "Modify leaving atom flag"  2020-07-17  RCSB  
GPO  "Obsolete component"        2020-08-11  RCSB  
##
