data_DGO
#

_chem_comp.id                                   DGO
_chem_comp.name                                 D-glucal
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H10 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-01-14
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       146.141
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DGO
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5HJO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DGO  C1   C1   C  0  1  N  N  N  -15.430  -47.993  -52.195  -0.439  -2.000   0.066  C1   DGO   1  
DGO  C5   C2   C  0  1  N  N  R  -16.037  -46.541  -54.054   0.835  -0.012  -0.238  C5   DGO   2  
DGO  C4   C3   C  0  1  N  N  S  -14.927  -47.231  -54.846  -0.400   0.758   0.250  C4   DGO   3  
DGO  C6   C5   C  0  1  N  N  N  -17.268  -46.222  -54.872   2.103   0.640   0.316  C6   DGO   4  
DGO  C3   C4   C  0  1  N  N  R  -13.766  -47.772  -53.987  -1.642   0.108  -0.373  C3   DGO   5  
DGO  O6   O3   O  0  1  N  N  N  -17.762  -47.357  -55.573   3.251  -0.027  -0.212  O6   DGO   6  
DGO  O5   O    O  0  1  N  N  N  -16.389  -47.295  -52.872   0.738  -1.359   0.236  O5   DGO   7  
DGO  O4   O2   O  0  1  N  N  N  -14.435  -46.218  -55.711  -0.313   2.122  -0.166  O4   DGO   8  
DGO  O3   O1   O  0  1  N  N  N  -13.225  -48.940  -54.618  -2.814   0.590   0.287  O3   DGO   9  
DGO  C2   C    C  0  1  N  N  N  -14.202  -48.195  -52.614  -1.558  -1.386  -0.212  C2   DGO  10  
DGO  H1   H1   H  0  1  N  N  N  -15.704  -48.413  -51.238  -0.454  -3.076   0.160  H1   DGO  11  
DGO  H5   H2   H  0  1  N  N  N  -15.626  -45.578  -53.718   0.865  -0.007  -1.327  H5   DGO  12  
DGO  H4   H3   H  0  1  N  N  N  -15.359  -48.060  -55.426  -0.460   0.707   1.337  H4   DGO  13  
DGO  C61  H4   H  0  1  N  N  N  -17.014  -45.439  -55.602   2.128   1.691   0.026  C61  DGO  14  
DGO  C62  H5   H  0  1  N  N  N  -18.055  -45.853  -54.197   2.106   0.563   1.403  C62  DGO  15  
DGO  H3   H6   H  0  1  N  N  N  -12.995  -46.992  -53.901  -1.691   0.359  -1.432  H3   DGO  16  
DGO  HO6  H7   H  0  1  N  N  N  -18.533  -47.111  -56.071   4.093   0.335   0.097  HO6  DGO  17  
DGO  HO4  H8   H  0  1  N  N  N  -13.733  -46.570  -56.245  -1.063   2.667   0.110  HO4  DGO  18  
DGO  HO3  H9   H  0  1  N  N  N  -12.509  -49.280  -54.095  -3.639   0.220  -0.056  HO3  DGO  19  
DGO  H2   H10  H  0  1  N  N  N  -13.491  -48.675  -51.958  -2.457  -1.973  -0.331  H2   DGO  20  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DGO  O4  C4   SING  N  N   1  
DGO  O6  C6   SING  N  N   2  
DGO  C6  C5   SING  N  N   3  
DGO  C4  C5   SING  N  N   4  
DGO  C4  C3   SING  N  N   5  
DGO  O3  C3   SING  N  N   6  
DGO  C5  O5   SING  N  N   7  
DGO  C3  C2   SING  N  N   8  
DGO  O5  C1   SING  N  N   9  
DGO  C2  C1   DOUB  N  N  10  
DGO  C1  H1   SING  N  N  11  
DGO  C5  H5   SING  N  N  12  
DGO  C4  H4   SING  N  N  13  
DGO  C6  C61  SING  N  N  14  
DGO  C6  C62  SING  N  N  15  
DGO  C3  H3   SING  N  N  16  
DGO  O6  HO6  SING  N  N  17  
DGO  O4  HO4  SING  N  N  18  
DGO  O3  HO3  SING  N  N  19  
DGO  C2  H2   SING  N  N  20  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DGO  SMILES            ACDLabs               12.01  "C=1OC(C(C(C=1)O)O)CO"  
DGO  InChI             InChI                 1.03   "InChI=1S/C6H10O4/c7-3-5-6(9)4(8)1-2-10-5/h1-2,4-9H,3H2/t4-,5-,6+/m1/s1"  
DGO  InChIKey          InChI                 1.03   YVECGMZCTULTIS-PBXRRBTRSA-N  
DGO  SMILES_CANONICAL  CACTVS                3.385  "OC[C@H]1OC=C[C@@H](O)[C@@H]1O"  
DGO  SMILES            CACTVS                3.385  "OC[CH]1OC=C[CH](O)[CH]1O"  
DGO  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.4  "C1=CO[C@@H]([C@H]([C@@H]1O)O)CO"  
DGO  SMILES            "OpenEye OEToolkits"  2.0.4  "C1=COC(C(C1O)O)CO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DGO  "SYSTEMATIC NAME"  ACDLabs               12.01  "1,5-anhydro-2-deoxy-D-arabino-hex-1-enitol"  
DGO  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.4  "(2~{R},3~{S},4~{R})-2-(hydroxymethyl)-3,4-dihydro-2~{H}-pyran-3,4-diol"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
DGO  "CARBOHYDRATE ISOMER"                  D             PDB  ?  
DGO  "CARBOHYDRATE RING"                    dihydropyran  PDB  ?  
DGO  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose        PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DGO  "Create component"          2016-01-14  EBI   
DGO  "Initial release"           2016-07-27  RCSB  
DGO  "Other modification"        2020-07-03  RCSB  
DGO  "Modify internal type"      2020-07-17  RCSB  
DGO  "Modify linking type"       2020-07-17  RCSB  
DGO  "Modify atom id"            2020-07-17  RCSB  
DGO  "Modify component atom id"  2020-07-17  RCSB  
##
