data_D9O
#

_chem_comp.id                                   D9O
_chem_comp.name                                 "4-[[(3~{E},5~{Z},8~{S},9~{E},11~{E},14~{S},16~{R},17~{Z},19~{E},24~{R})-24-methyl-14,16-bis(oxidanyl)-2-oxidanylidene-1-oxacyclotetracosa-3,5,9,11,17,19-hexaen-8-yl]oxy]-4-oxidanylidene-butanoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H38 O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-07-24
_chem_comp.pdbx_modified_date                   2020-07-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       502.597
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    D9O
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6KJR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
D9O  C10  C1   C  0  1  N  N  N   7.331  -25.818   2.242   4.529   0.640   0.469  C10  D9O   1  
D9O  C11  C2   C  0  1  N  N  N   8.267  -25.026   3.153   5.050   0.418  -0.928  C11  D9O   2  
D9O  C12  C3   C  0  1  N  N  N   7.566  -23.882   3.877   6.434  -0.229  -0.859  C12  D9O   3  
D9O  C13  C4   C  0  1  N  N  N   8.459  -22.646   3.943   6.955  -0.450  -2.256  C13  D9O   4  
D9O  C17  C5   C  0  1  N  N  N  10.132  -27.131   0.527   2.133   0.143   2.478  C17  D9O   5  
D9O  C18  C6   C  0  1  N  N  N  10.867  -28.189   0.263   2.005  -0.895   1.658  C18  D9O   6  
D9O  C19  C7   C  0  1  N  N  N  11.913  -28.182  -0.847   1.275  -2.094   2.099  C19  D9O   7  
D9O  C20  C8   C  0  1  N  N  N  13.150  -28.483  -0.513   1.145  -3.131   1.278  C20  D9O   8  
D9O  C21  C9   C  0  1  N  N  N  14.277  -28.505  -1.540   0.397  -4.359   1.728  C21  D9O   9  
D9O  C22  C10  C  0  1  N  N  S  15.604  -28.394  -0.787  -0.716  -4.674   0.727  C22  D9O  10  
D9O  C24  C11  C  0  1  N  N  N  16.676  -29.306  -1.390  -1.993  -3.938   1.136  C24  D9O  11  
D9O  C25  C12  C  0  1  N  N  R  16.164  -30.247  -2.478  -2.852  -3.679  -0.103  C25  D9O  12  
D9O  O14  O1   O  0  1  N  N  N   8.073  -21.614   4.551   8.161  -1.010  -2.442  O14  D9O  13  
D9O  C02  C13  C  0  1  N  N  N   8.735  -33.553   3.668  -2.392   3.899  -0.031  C02  D9O  14  
D9O  C03  C14  C  0  1  N  N  N   8.795  -32.165   4.306  -1.038   4.238  -0.279  C03  D9O  15  
D9O  C04  C15  C  0  1  N  N  N   9.311  -31.147   3.650  -0.060   3.741   0.513  C04  D9O  16  
D9O  C05  C16  C  0  1  N  N  N   9.362  -29.781   4.327   1.337   4.090   0.258  C05  D9O  17  
D9O  C06  C17  C  0  1  N  N  N   9.203  -28.660   3.654   2.304   3.556   1.004  C06  D9O  18  
D9O  C07  C18  C  0  1  N  N  N   8.952  -28.648   2.149   1.960   2.590   2.114  C07  D9O  19  
D9O  C08  C19  C  0  1  N  N  S   9.113  -27.206   1.665   2.881   1.372   2.027  C08  D9O  20  
D9O  C27  C20  C  0  1  N  N  N  16.531  -31.697  -2.165  -4.282  -4.053   0.189  C27  D9O  21  
D9O  C28  C21  C  0  1  N  N  N  15.943  -32.443  -1.245  -5.268  -3.232  -0.158  C28  D9O  22  
D9O  C29  C22  C  0  1  N  N  N  14.809  -31.985  -0.325  -4.963  -1.957  -0.826  C29  D9O  23  
D9O  C30  C23  C  0  1  N  N  N  14.507  -32.769   0.692  -5.949  -1.135  -1.169  C30  D9O  24  
D9O  C31  C24  C  0  1  N  N  N  13.398  -32.438   1.690  -5.637   0.171  -1.854  C31  D9O  25  
D9O  C32  C25  C  0  1  N  N  N  13.056  -33.710   2.469  -5.310   1.233  -0.802  C32  D9O  26  
D9O  C33  C26  C  0  1  N  N  N  11.808  -33.562   3.338  -4.254   2.191  -1.357  C33  D9O  27  
D9O  C34  C27  C  0  1  N  N  R  10.752  -34.636   3.069  -4.574   3.619  -0.910  C34  D9O  28  
D9O  C35  C28  C  0  1  N  N  N  11.382  -36.019   3.217  -5.243   3.584   0.466  C35  D9O  29  
D9O  O01  O2   O  0  1  N  N  N   7.868  -33.815   2.905  -2.676   3.176   0.906  O01  D9O  30  
D9O  O09  O3   O  0  1  N  N  N   7.875  -26.675   1.278   3.321   1.194   0.655  O09  D9O  31  
D9O  O15  O4   O  0  1  N  N  N   9.586  -22.662   3.382   6.287  -0.124  -3.208  O15  D9O  32  
D9O  O16  O5   O  0  1  N  N  N   6.156  -25.705   2.351   5.197   0.313   1.422  O16  D9O  33  
D9O  O23  O6   O  0  1  N  N  N  16.044  -27.064  -0.822  -0.318  -4.249  -0.578  O23  D9O  34  
D9O  O26  O7   O  0  1  N  N  N  16.777  -29.890  -3.685  -2.367  -4.467  -1.192  O26  D9O  35  
D9O  O36  O8   O  0  1  N  N  N   9.703  -34.514   3.989  -3.366   4.377  -0.833  O36  D9O  36  
D9O  H1   H1   H  0  1  N  N  N   8.688  -25.711   3.904   4.368  -0.238  -1.470  H1   D9O  37  
D9O  H2   H2   H  0  1  N  N  N   9.080  -24.608   2.542   5.121   1.375  -1.445  H2   D9O  38  
D9O  H3   H3   H  0  1  N  N  N   6.641  -23.629   3.338   7.115   0.427  -0.317  H3   D9O  39  
D9O  H4   H4   H  0  1  N  N  N   7.319  -24.202   4.900   6.363  -1.186  -0.342  H4   D9O  40  
D9O  H5   H5   H  0  1  N  N  N  10.246  -26.225  -0.050   1.705   0.105   3.468  H5   D9O  41  
D9O  H6   H6   H  0  1  N  N  N  10.726  -29.086   0.847   2.437  -0.858   0.669  H6   D9O  42  
D9O  H7   H7   H  0  1  N  N  N  11.649  -27.940  -1.866   0.845  -2.131   3.088  H7   D9O  43  
D9O  H8   H8   H  0  1  N  N  N  13.373  -28.721   0.517   1.574  -3.092   0.287  H8   D9O  44  
D9O  H9   H9   H  0  1  N  N  N  14.168  -27.657  -2.232   1.085  -5.203   1.784  H9   D9O  45  
D9O  H10  H10  H  0  1  N  N  N  14.247  -29.447  -2.107  -0.038  -4.179   2.711  H10  D9O  46  
D9O  H11  H11  H  0  1  N  N  N  15.435  -28.705   0.254  -0.903  -5.748   0.718  H11  D9O  47  
D9O  H12  H12  H  0  1  N  N  N  17.104  -29.916  -0.581  -2.553  -4.548   1.845  H12  D9O  48  
D9O  H13  H13  H  0  1  N  N  N  17.462  -28.672  -1.826  -1.732  -2.988   1.602  H13  D9O  49  
D9O  H14  H14  H  0  1  N  N  N  15.070  -30.158  -2.549  -2.799  -2.623  -0.368  H14  D9O  50  
D9O  H15  H15  H  0  1  N  N  N   8.743  -20.943   4.493   8.452  -1.132  -3.356  H15  D9O  51  
D9O  H16  H16  H  0  1  N  N  N   8.410  -32.018   5.304  -0.786   4.890  -1.102  H16  D9O  52  
D9O  H17  H17  H  0  1  N  N  N   9.692  -31.277   2.648  -0.312   3.088   1.336  H17  D9O  53  
D9O  H18  H18  H  0  1  N  N  N   9.534  -29.731   5.392   1.586   4.774  -0.539  H18  D9O  54  
D9O  H19  H19  H  0  1  N  N  N   9.252  -27.720   4.184   3.336   3.816   0.817  H19  D9O  55  
D9O  H20  H20  H  0  1  N  N  N   7.933  -29.004   1.936   2.092   3.082   3.078  H20  D9O  56  
D9O  H21  H21  H  0  1  N  N  N   9.681  -29.297   1.642   0.924   2.270   2.008  H21  D9O  57  
D9O  H22  H22  H  0  1  N  N  N   9.511  -26.618   2.505   3.748   1.525   2.670  H22  D9O  58  
D9O  H23  H23  H  0  1  N  N  N  17.329  -32.146  -2.737  -4.506  -4.988   0.680  H23  D9O  59  
D9O  H24  H24  H  0  1  N  N  N  16.292  -33.459  -1.134  -6.293  -3.500   0.052  H24  D9O  60  
D9O  H25  H25  H  0  1  N  N  N  14.279  -31.060  -0.501  -3.938  -1.689  -1.037  H25  D9O  61  
D9O  H26  H26  H  0  1  N  N  N  15.067  -33.683   0.825  -6.974  -1.402  -0.957  H26  D9O  62  
D9O  H27  H27  H  0  1  N  N  N  13.744  -31.658   2.385  -4.780   0.038  -2.515  H27  D9O  63  
D9O  H28  H28  H  0  1  N  N  N  12.508  -32.081   1.152  -6.500   0.491  -2.437  H28  D9O  64  
D9O  H29  H29  H  0  1  N  N  N  12.888  -34.526   1.751  -6.213   1.791  -0.556  H29  D9O  65  
D9O  H30  H30  H  0  1  N  N  N  13.907  -33.963   3.118  -4.925   0.749   0.096  H30  D9O  66  
D9O  H31  H31  H  0  1  N  N  N  12.109  -33.625   4.394  -3.271   1.905  -0.983  H31  D9O  67  
D9O  H32  H32  H  0  1  N  N  N  11.361  -32.576   3.142  -4.256   2.143  -2.446  H32  D9O  68  
D9O  H33  H33  H  0  1  N  N  N  10.382  -34.521   2.040  -5.248   4.082  -1.630  H33  D9O  69  
D9O  H34  H34  H  0  1  N  N  N  10.623  -36.791   3.024  -4.655   2.960   1.140  H34  D9O  70  
D9O  H35  H35  H  0  1  N  N  N  12.205  -36.126   2.495  -5.303   4.595   0.866  H35  D9O  71  
D9O  H36  H36  H  0  1  N  N  N  11.772  -36.137   4.239  -6.247   3.170   0.371  H36  D9O  72  
D9O  H37  H37  H  0  1  N  N  N  16.868  -26.990  -0.355   0.486  -4.676  -0.902  H37  D9O  73  
D9O  H38  H38  H  0  1  N  N  N  16.560  -28.990  -3.897  -2.865  -4.353  -2.013  H38  D9O  74  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
D9O  O26  C25  SING  N  N   1  
D9O  C25  C27  SING  N  N   2  
D9O  C25  C24  SING  N  N   3  
D9O  C27  C28  DOUB  N  Z   4  
D9O  C21  C22  SING  N  N   5  
D9O  C21  C20  SING  N  N   6  
D9O  C24  C22  SING  N  N   7  
D9O  C28  C29  SING  N  N   8  
D9O  C19  C20  DOUB  N  E   9  
D9O  C19  C18  SING  N  N  10  
D9O  O23  C22  SING  N  N  11  
D9O  C29  C30  DOUB  N  E  12  
D9O  C18  C17  DOUB  N  E  13  
D9O  C17  C08  SING  N  N  14  
D9O  C30  C31  SING  N  N  15  
D9O  O09  C08  SING  N  N  16  
D9O  O09  C10  SING  N  N  17  
D9O  C08  C07  SING  N  N  18  
D9O  C31  C32  SING  N  N  19  
D9O  C07  C06  SING  N  N  20  
D9O  C10  O16  DOUB  N  N  21  
D9O  C10  C11  SING  N  N  22  
D9O  C32  C33  SING  N  N  23  
D9O  O01  C02  DOUB  N  N  24  
D9O  C34  C35  SING  N  N  25  
D9O  C34  C33  SING  N  N  26  
D9O  C34  O36  SING  N  N  27  
D9O  C11  C12  SING  N  N  28  
D9O  O15  C13  DOUB  N  N  29  
D9O  C04  C03  DOUB  N  E  30  
D9O  C04  C05  SING  N  N  31  
D9O  C06  C05  DOUB  N  Z  32  
D9O  C02  O36  SING  N  N  33  
D9O  C02  C03  SING  N  N  34  
D9O  C12  C13  SING  N  N  35  
D9O  C13  O14  SING  N  N  36  
D9O  C11  H1   SING  N  N  37  
D9O  C11  H2   SING  N  N  38  
D9O  C12  H3   SING  N  N  39  
D9O  C12  H4   SING  N  N  40  
D9O  C17  H5   SING  N  N  41  
D9O  C18  H6   SING  N  N  42  
D9O  C19  H7   SING  N  N  43  
D9O  C20  H8   SING  N  N  44  
D9O  C21  H9   SING  N  N  45  
D9O  C21  H10  SING  N  N  46  
D9O  C22  H11  SING  N  N  47  
D9O  C24  H12  SING  N  N  48  
D9O  C24  H13  SING  N  N  49  
D9O  C25  H14  SING  N  N  50  
D9O  O14  H15  SING  N  N  51  
D9O  C03  H16  SING  N  N  52  
D9O  C04  H17  SING  N  N  53  
D9O  C05  H18  SING  N  N  54  
D9O  C06  H19  SING  N  N  55  
D9O  C07  H20  SING  N  N  56  
D9O  C07  H21  SING  N  N  57  
D9O  C08  H22  SING  N  N  58  
D9O  C27  H23  SING  N  N  59  
D9O  C28  H24  SING  N  N  60  
D9O  C29  H25  SING  N  N  61  
D9O  C30  H26  SING  N  N  62  
D9O  C31  H27  SING  N  N  63  
D9O  C31  H28  SING  N  N  64  
D9O  C32  H29  SING  N  N  65  
D9O  C32  H30  SING  N  N  66  
D9O  C33  H31  SING  N  N  67  
D9O  C33  H32  SING  N  N  68  
D9O  C34  H33  SING  N  N  69  
D9O  C35  H34  SING  N  N  70  
D9O  C35  H35  SING  N  N  71  
D9O  C35  H36  SING  N  N  72  
D9O  O23  H37  SING  N  N  73  
D9O  O26  H38  SING  N  N  74  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
D9O  InChI             InChI                 1.03   "InChI=1S/C28H38O8/c1-22-13-7-3-2-4-8-14-23(29)21-24(30)15-9-5-10-16-25(36-28(34)20-19-26(31)32)17-11-6-12-18-27(33)35-22/h2,4-6,8-12,14,16,18,22-25,29-30H,3,7,13,15,17,19-21H2,1H3,(H,31,32)/b4-2+,9-5+,11-6-,14-8-,16-10+,18-12+/t22-,23+,24+,25-/m1/s1"  
D9O  InChIKey          InChI                 1.03   QPJULYYJHQTWML-RJAZCIHLSA-N  
D9O  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H]1CCC\C=C\C=C/[C@H](O)C[C@@H](O)C\C=C\C=C\[C@H](C/C=C\C=C\C(=O)O1)OC(=O)CCC(O)=O"  
D9O  SMILES            CACTVS                3.385  "C[CH]1CCCC=CC=C[CH](O)C[CH](O)CC=CC=C[CH](CC=CC=CC(=O)O1)OC(=O)CCC(O)=O"  
D9O  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@@H]1CCC/C=C/C=C\[C@@H](C[C@H](C/C=C/C=C/[C@H](C/C=C\C=C\C(=O)O1)OC(=O)CCC(=O)O)O)O"  
D9O  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1CCCC=CC=CC(CC(CC=CC=CC(CC=CC=CC(=O)O1)OC(=O)CCC(=O)O)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          D9O
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "4-[[(3~{E},5~{Z},8~{S},9~{E},11~{E},14~{S},16~{R},17~{Z},19~{E},24~{R})-24-methyl-14,16-bis(oxidanyl)-2-oxidanylidene-1-oxacyclotetracosa-3,5,9,11,17,19-hexaen-8-yl]oxy]-4-oxidanylidene-butanoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
D9O  "Create component"  2019-07-24  PDBJ  
D9O  "Initial release"   2020-07-29  RCSB  
##
