data_D1O
# 
_chem_comp.id                                    D1O 
_chem_comp.name                                  
;tri-(mi2-acetato-(O, O')-diaqua-dirhodium(II, II)
;
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H14 O8 Rh2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-12-14 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        419.982 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     D1O 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QHR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
D1O C1  C1  C  0 1 N N N 13.836 7.078  22.211 0.196  0.399  2.112  C1  D1O 1  
D1O C2  C2  C  0 1 N N N 15.063 7.366  23.079 1.146  0.943  3.191  C2  D1O 2  
D1O C3  C3  C  0 1 N N N 12.910 8.317  18.798 -2.312 0.241  0.393  C3  D1O 3  
D1O C4  C4  C  0 1 N N N 13.501 9.211  17.698 -3.747 -0.152 0.004  C4  D1O 4  
D1O C5  C5  C  0 1 N N N 10.666 5.152  22.144 2.198  -0.387 -0.854 C5  D1O 5  
D1O C6  C6  C  0 1 N N N 9.950  4.092  23.026 3.602  -0.808 -0.388 C6  D1O 6  
D1O RH1 RH1 RH 0 0 N N N 12.312 5.744  20.050 0.056  1.101  -0.418 RH1 D1O 7  
D1O RH2 RH2 RH 0 0 N N N 11.175 7.625  21.007 -0.144 -1.211 0.038  RH2 D1O 8  
D1O O1  O1  O  0 1 N N N 13.835 6.101  21.461 -0.248 1.501  1.321  O1  D1O 9  
D1O O2  O2  O  0 1 N N N 12.846 7.814  22.257 0.836  -0.704 1.474  O2  D1O 10 
D1O O3  O3  O  0 1 N N N 10.952 5.119  18.580 0.376  1.921  -1.964 O3  D1O 11 
D1O O4  O4  O  0 1 N N N 9.567  7.389  19.686 -1.107 -1.438 -1.479 O4  D1O 12 
D1O O0  O5  O  0 1 N N N 11.419 4.465  21.450 1.796  0.736  -0.076 O0  D1O 13 
D1O O9  O6  O  0 1 N N N 10.307 6.309  22.375 1.375  -1.549 -0.887 O9  D1O 14 
D1O O7  O7  O  0 1 N N N 13.172 7.120  18.718 -1.716 0.888  -0.728 O7  D1O 15 
D1O O8  O8  O  0 1 N N N 12.111 8.839  19.575 -1.676 -0.905 0.955  O8  D1O 16 
D1O H1  H1  H  0 1 N N N 14.259 7.697  21.406 -0.694 -0.001 2.629  H1  D1O 17 
D1O H2  H2  H  0 1 N N N 14.884 8.271  23.679 2.077  1.266  2.726  H2  D1O 18 
D1O H3  H3  H  0 1 N N N 15.247 6.513  23.748 0.678  1.789  3.695  H3  D1O 19 
D1O H4  H4  H  0 1 N N N 15.940 7.521  22.434 1.357  0.159  3.919  H4  D1O 20 
D1O H5  H5  H  0 1 N N N 13.762 8.509  19.467 -2.384 0.996  1.195  H5  D1O 21 
D1O H6  H6  H  0 1 N N N 13.201 10.255 17.873 -4.287 -0.482 0.891  H6  D1O 22 
D1O H7  H7  H  0 1 N N N 14.598 9.137  17.716 -4.255 0.711  -0.429 H7  D1O 23 
D1O H8  H8  H  0 1 N N N 13.127 8.881  16.717 -3.718 -0.961 -0.726 H8  D1O 24 
D1O H9  H9  H  0 1 N N N 9.876  5.056  21.385 2.293  -0.032 -1.897 H9  D1O 25 
D1O H10 H10 H  0 1 N N N 9.240  4.594  23.700 4.012  -1.540 -1.085 H10 D1O 26 
D1O H11 H11 H  0 1 N N N 9.407  3.385  22.381 4.252  0.066  -0.356 H11 D1O 27 
D1O H12 H12 H  0 1 N N N 10.696 3.546  23.621 3.538  -1.250 0.606  H12 D1O 28 
D1O H13 H13 H  0 1 N N N 10.389 4.442  18.936 0.413  2.885  -1.898 H13 D1O 29 
D1O H14 H14 H  0 1 N N N 8.908  6.833  20.085 -1.388 -2.350 -1.634 H14 D1O 30 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
D1O C4  C3  SING N N 1  
D1O O3  RH1 SING N N 2  
D1O O7  C3  SING N N 3  
D1O O7  RH1 SING N N 4  
D1O C3  O8  SING N N 5  
D1O O8  RH2 SING N N 6  
D1O O4  RH2 SING N N 7  
D1O RH1 RH2 SING N N 8  
D1O RH1 O0  SING N N 9  
D1O RH1 O1  SING N N 10 
D1O RH2 O2  SING N N 11 
D1O RH2 O9  SING N N 12 
D1O O0  C5  SING N N 13 
D1O O1  C1  SING N N 14 
D1O C5  O9  SING N N 15 
D1O C5  C6  SING N N 16 
D1O C1  O2  SING N N 17 
D1O C1  C2  SING N N 18 
D1O C1  H1  SING N N 19 
D1O C2  H2  SING N N 20 
D1O C2  H3  SING N N 21 
D1O C2  H4  SING N N 22 
D1O C3  H5  SING N N 23 
D1O C4  H6  SING N N 24 
D1O C4  H7  SING N N 25 
D1O C4  H8  SING N N 26 
D1O C5  H9  SING N N 27 
D1O C6  H10 SING N N 28 
D1O C6  H11 SING N N 29 
D1O C6  H12 SING N N 30 
D1O O3  H13 SING N N 31 
D1O O4  H14 SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
D1O InChI            InChI                1.06  "InChI=1S/3C2H4O2.2H2O.2Rh/c3*1-2(3)4;;;;/h3*2H,1H3;2*1H2;;/q3*-2;;;2*+4/p-2" 
D1O InChIKey         InChI                1.06  WOIABTFBXKXYRQ-UHFFFAOYSA-L                                                   
D1O SMILES_CANONICAL CACTVS               3.385 "C[C@H]1O[Rh]23(O)O[C@@H](C)O[Rh]2(O)(O1)O[C@H](C)O3"                         
D1O SMILES           CACTVS               3.385 "C[CH]1O[Rh]23(O)O[CH](C)O[Rh]2(O)(O1)O[CH](C)O3"                             
D1O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1O[Rh]23(OC(O[Rh]2(O1)(OC(O3)C)O)C)O"                                      
D1O SMILES           "OpenEye OEToolkits" 2.0.7 "CC1O[Rh]23(OC(O[Rh]2(O1)(OC(O3)C)O)C)O"                                      
# 
_pdbx_chem_comp_identifier.comp_id           D1O 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3,7,10-trimethyl-1,5-bis(oxidanyl)-2,4,6,8,9,11-hexaoxa-1$l^{5},5$l^{5}-dirhodatricyclo[3.3.3.0^{1,5}]undecane" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
D1O "Create component"  2021-12-14 PDBE 
D1O "Modify name"       2022-03-30 PDBE 
D1O "Initial release"   2022-06-08 RCSB 
D1O "Modify descriptor" 2022-08-22 RCSB 
# 
