data_A1ABO
# 
_chem_comp.id                                    A1ABO 
_chem_comp.name                                  "(5S)-5-(trifluoromethyl)-1,4-diazepane" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H11 F3 N2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-01-04 
_chem_comp.pdbx_modified_date                    2024-01-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        168.160 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ABO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GTE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ABO C10  C1  C 0 1 N N N N N N 23.867 -25.552 -26.988 1.840  -1.375 -0.524 C10  A1ABO 1  
A1ABO C02  C2  C 0 1 N N N N N N 22.348 -23.064 -24.824 -1.684 -0.036 0.013  C02  A1ABO 2  
A1ABO C05  C3  C 0 1 N N S N N N 23.580 -23.561 -25.673 -0.220 0.010  -0.428 C05  A1ABO 3  
A1ABO C07  C4  C 0 1 N N N N N N 25.116 -24.834 -24.326 1.741  1.431  -0.454 C07  A1ABO 4  
A1ABO C08  C5  C 0 1 N N N N N N 25.537 -26.019 -25.174 2.621  0.720  0.543  C08  A1ABO 5  
A1ABO C11  C6  C 0 1 N N N N N N 23.294 -24.369 -26.846 0.538  -1.177 0.208  C11  A1ABO 6  
A1ABO F01  F1  F 0 1 N N N N N N 22.084 -23.788 -23.702 -1.756 0.099  1.404  F01  A1ABO 7  
A1ABO F03  F2  F 0 1 N N N N N N 22.618 -21.805 -24.363 -2.388 1.009  -0.594 F03  A1ABO 8  
A1ABO F04  F3  F 0 1 N N N N N N 21.225 -22.944 -25.495 -2.247 -1.260 -0.366 F04  A1ABO 9  
A1ABO N06  N1  N 0 1 N N N N N N 24.603 -23.604 -24.947 0.335  1.238  -0.045 N06  A1ABO 10 
A1ABO N09  N2  N 0 1 N N N N N N 25.142 -25.942 -26.551 2.968  -0.644 0.097  N09  A1ABO 11 
A1ABO H1   H1  H 0 1 N N N N N N 23.176 -26.258 -26.504 2.076  -2.439 -0.538 H1   A1ABO 12 
A1ABO H101 H2  H 0 0 N N N N N N 23.875 -25.732 -28.073 1.721  -1.031 -1.551 H101 A1ABO 13 
A1ABO H2   H3  H 0 1 N N N N N N 23.779 -22.612 -26.192 -0.173 -0.078 -1.513 H2   A1ABO 14 
A1ABO H072 H4  H 0 0 N N N N N N 24.327 -25.197 -23.651 1.979  2.495  -0.462 H072 A1ABO 15 
A1ABO H071 H5  H 0 0 N N N N N N 25.997 -24.543 -23.736 1.897  1.012  -1.447 H071 A1ABO 16 
A1ABO H082 H6  H 0 0 N N N N N N 25.091 -26.926 -24.740 3.538  1.294  0.679  H082 A1ABO 17 
A1ABO H081 H7  H 0 0 N N N N N N 26.634 -26.095 -25.136 2.097  0.658  1.497  H081 A1ABO 18 
A1ABO H3   H8  H 0 1 N N N N N N 23.581 -23.770 -27.723 -0.067 -2.080 0.129  H3   A1ABO 19 
A1ABO H111 H9  H 0 0 N N N N N N 22.207 -24.539 -26.858 0.738  -0.961 1.258  H111 A1ABO 20 
A1ABO H4   H10 H 0 1 N N N N N N 25.351 -23.252 -25.510 -0.241 2.007  -0.354 H4   A1ABO 21 
A1ABO H091 H12 H 0 0 N N N N N N 25.286 -26.858 -26.924 3.375  -1.179 0.850  H091 A1ABO 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ABO C10 C11  SING N N 1  
A1ABO C10 N09  SING N N 2  
A1ABO C11 C05  SING N N 3  
A1ABO N09 C08  SING N N 4  
A1ABO C05 N06  SING N N 5  
A1ABO C05 C02  SING N N 6  
A1ABO F04 C02  SING N N 7  
A1ABO C08 C07  SING N N 8  
A1ABO N06 C07  SING N N 9  
A1ABO C02 F03  SING N N 10 
A1ABO C02 F01  SING N N 11 
A1ABO C10 H1   SING N N 12 
A1ABO C10 H101 SING N N 13 
A1ABO C05 H2   SING N N 14 
A1ABO C07 H072 SING N N 15 
A1ABO C07 H071 SING N N 16 
A1ABO C08 H082 SING N N 17 
A1ABO C08 H081 SING N N 18 
A1ABO C11 H3   SING N N 19 
A1ABO C11 H111 SING N N 20 
A1ABO N06 H4   SING N N 21 
A1ABO N09 H091 SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ABO SMILES           ACDLabs              12.01 "FC(F)(F)C1CCNCCN1"                                                       
A1ABO InChI            InChI                1.06  "InChI=1S/C6H11F3N2/c7-6(8,9)5-1-2-10-3-4-11-5/h5,10-11H,1-4H2/t5-/m0/s1" 
A1ABO InChIKey         InChI                1.06  FEWVFBNFNPVYAK-YFKPBYRVSA-N                                               
A1ABO SMILES_CANONICAL CACTVS               3.385 "FC(F)(F)[C@@H]1CCNCCN1"                                                  
A1ABO SMILES           CACTVS               3.385 "FC(F)(F)[CH]1CCNCCN1"                                                    
A1ABO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1CNCCN[C@@H]1C(F)(F)F"                                                  
A1ABO SMILES           "OpenEye OEToolkits" 2.0.7 "C1CNCCNC1C(F)(F)F"                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1ABO "SYSTEMATIC NAME" ACDLabs              12.01 "(5S)-5-(trifluoromethyl)-1,4-diazepane"    
A1ABO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5~{S})-5-(trifluoromethyl)-1,4-diazepane" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ABO "Create component" 2024-01-04 RCSB 
A1ABO "Initial release"  2024-01-24 RCSB 
# 
